BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= an--0769 (838 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 27 0.21 AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 25 0.65 AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protei... 24 2.0 >DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. Length = 630 Score = 27.1 bits (57), Expect = 0.21 Identities = 15/36 (41%), Positives = 20/36 (55%) Frame = +2 Query: 290 ALRKENGEFEALELTPYSSPPDLPDVMKSQETNGQE 397 A R++N E EA + PP+LP+ KS NG E Sbjct: 136 AAREDNDEEEAQKPKEQYIPPELPNDEKSLFENGVE 171 >AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase protein. Length = 580 Score = 25.4 bits (53), Expect = 0.65 Identities = 15/33 (45%), Positives = 18/33 (54%) Frame = +3 Query: 573 FLFTIKYFVINISICVPFNVLLRFDLNIPSTVS 671 F TIKY+ + VPFN + DLN ST S Sbjct: 297 FNLTIKYYKSGST--VPFNFMFIADLNNQSTAS 327 >AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protein kinase foraging protein. Length = 678 Score = 23.8 bits (49), Expect = 2.0 Identities = 10/22 (45%), Positives = 14/22 (63%) Frame = -3 Query: 278 VLDSEPLLC*RSGQIQPRSSHL 213 +++ E LLC R +IQ SHL Sbjct: 18 IVELEALLCRRDAEIQELRSHL 39 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 231,696 Number of Sequences: 438 Number of extensions: 4885 Number of successful extensions: 6 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 6 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6 length of database: 146,343 effective HSP length: 57 effective length of database: 121,377 effective search space used: 26824317 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -