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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0629
         (752 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_03_0038 + 11790075-11790302,11790397-11790542,11790915-117910...    42   5e-04
09_03_0039 + 11799277-11799486,11799565-11799710,11800758-118008...    41   0.001
08_02_0585 + 19014674-19014871,19014987-19015132,19016742-190168...    40   0.002
02_02_0080 + 6598427-6598663,6599246-6599391,6599567-6599669,660...    35   0.080
07_03_1192 + 24698355-24698433,24699312-24699391,24700027-247004...    31   0.98 
07_03_1193 - 24702135-24702421,24702835-24703160,24703240-247039...    30   2.3  
03_04_0076 - 17068516-17068838,17068897-17069198,17069282-170694...    29   3.0  
04_04_0658 + 27006245-27006305,27006447-27006523,27006798-270072...    29   4.0  
03_04_0075 + 17066321-17066381,17066476-17067534,17067641-17067927     29   4.0  

>09_03_0038 +
           11790075-11790302,11790397-11790542,11790915-11791017,
           11791148-11791334,11791466-11791559,11791702-11791855,
           11792189-11792305,11792695-11792808,11793629-11793811,
           11794209-11794494,11794592-11794713,11794746-11794802,
           11794803-11794900,11795036-11795213,11795355-11795455,
           11795530-11795629,11795751-11795828,11796785-11796862,
           11796956-11797138
          Length = 868

 Score = 41.9 bits (94), Expect = 5e-04
 Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
 Frame = +3

Query: 3   SEAAAQEIEEFFSTHESPGAERSVQQALESVRLNAAWLR--RDLASTATYLH 152
           S+    EI +FF+T   PG ER+++Q+LE V +NA W+   R  A  A  +H
Sbjct: 811 SKEKEAEISQFFATRTKPGYERTLKQSLERVLINARWIEGIRGEAKLAQTVH 862


>09_03_0039 +
           11799277-11799486,11799565-11799710,11800758-11800860,
           11800996-11801182,11801299-11801392,11801530-11801683,
           11801963-11802067,11802151-11802267,11802688-11802801,
           11803171-11803260,11803875-11804057,11809196-11809550,
           11809574-11809643,11809993-11810167,11810251-11810351,
           11810390-11810516,11810639-11810716,11811926-11812270
          Length = 917

 Score = 41.1 bits (92), Expect = 0.001
 Identities = 16/38 (42%), Positives = 28/38 (73%)
 Frame = +3

Query: 3   SEAAAQEIEEFFSTHESPGAERSVQQALESVRLNAAWL 116
           S+    EI +FF+T   PG +R+++Q+LE+VR++A W+
Sbjct: 860 SKEKEAEISQFFATRTKPGFKRALKQSLENVRISARWV 897


>08_02_0585 +
           19014674-19014871,19014987-19015132,19016742-19016844,
           19017064-19017250,19017368-19017461,19017570-19017723,
           19018076-19018192,19018276-19018296,19019096-19019209,
           19019970-19020152,19021032-19021239,19021326-19021447,
           19021559-19021656,19021875-19022052,19022130-19022244,
           19022331-19022398,19022526-19022603,19023737-19023814,
           19023897-19024082
          Length = 815

 Score = 39.9 bits (89), Expect = 0.002
 Identities = 16/38 (42%), Positives = 26/38 (68%)
 Frame = +3

Query: 3   SEAAAQEIEEFFSTHESPGAERSVQQALESVRLNAAWL 116
           +E  A E+ EFF+    P  ER+++Q+LE VR++A W+
Sbjct: 757 TEEKAAEVSEFFAGKTKPSFERALKQSLERVRISARWI 794


>02_02_0080 +
           6598427-6598663,6599246-6599391,6599567-6599669,
           6600407-6600593,6600699-6600792,6601290-6601443,
           6601751-6601855,6601937-6602053,6602248-6602361,
           6602891-6603073,6603207-6603486,6603565-6603686,
           6603763-6603860,6603941-6604118,6604439-6604553,
           6604656-6604723,6604825-6604902,6604986-6605060,
           6605156-6605338
          Length = 878

 Score = 34.7 bits (76), Expect = 0.080
 Identities = 13/38 (34%), Positives = 23/38 (60%)
 Frame = +3

Query: 3   SEAAAQEIEEFFSTHESPGAERSVQQALESVRLNAAWL 116
           ++    + EEFF +       R+V+Q++E VR+NA W+
Sbjct: 821 TDEMGDDAEEFFKSRTKANIARTVKQSIERVRINAKWV 858


>07_03_1192 +
           24698355-24698433,24699312-24699391,24700027-24700483,
           24700641-24700794,24700878-24701155,24701225-24701517
          Length = 446

 Score = 31.1 bits (67), Expect = 0.98
 Identities = 8/17 (47%), Positives = 15/17 (88%)
 Frame = -2

Query: 541 IRIHFNIRINYNEYWLI 491
           IR+H+++++NY EYW +
Sbjct: 288 IRVHWHVKVNYKEYWRV 304


>07_03_1193 -
           24702135-24702421,24702835-24703160,24703240-24703910,
           24704342-24704421,24704515-24704572
          Length = 473

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 7/15 (46%), Positives = 14/15 (93%)
 Frame = -2

Query: 541 IRIHFNIRINYNEYW 497
           +R+H+++++NY EYW
Sbjct: 317 VRVHWHVKLNYREYW 331


>03_04_0076 -
           17068516-17068838,17068897-17069198,17069282-17069435,
           17069506-17069965,17070413-17070492,17070813-17070869,
           17071757-17071838
          Length = 485

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 7/17 (41%), Positives = 15/17 (88%)
 Frame = -2

Query: 541 IRIHFNIRINYNEYWLI 491
           IR+H+++++NY +YW +
Sbjct: 309 IRVHWHVKLNYRDYWRV 325


>04_04_0658 +
           27006245-27006305,27006447-27006523,27006798-27007225,
           27007614-27007882,27007966-27008249
          Length = 372

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 7/17 (41%), Positives = 15/17 (88%)
 Frame = -2

Query: 541 IRIHFNIRINYNEYWLI 491
           +R+H++++I+Y EYW +
Sbjct: 217 VRVHWHVKISYREYWRV 233


>03_04_0075 + 17066321-17066381,17066476-17067534,17067641-17067927
          Length = 468

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 7/15 (46%), Positives = 14/15 (93%)
 Frame = -2

Query: 541 IRIHFNIRINYNEYW 497
           IR+H+++++NY +YW
Sbjct: 312 IRVHWHVKLNYKDYW 326


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,668,099
Number of Sequences: 37544
Number of extensions: 229665
Number of successful extensions: 390
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 387
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 390
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2004270760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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