Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0628
         (759 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0449 + 23741072-23741506,23741599-23741783,23742172-23742307     29   4.0  
12_01_0038 - 312152-312748,312930-313362,313572-314440,314535-31...    28   9.3  
11_01_0039 - 290960-291086,291615-291714,291809-292013,292466-29...    28   9.3  

>11_06_0449 + 23741072-23741506,23741599-23741783,23742172-23742307
          Length = 251

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 12/23 (52%), Positives = 16/23 (69%), Gaps = 3/23 (13%)
 Frame = +3

Query: 567 KLNIYVFTG---NTVLQFLNENW 626
           KL +YVF G   N+V+ F+N NW
Sbjct: 146 KLQVYVFCGPLINSVINFINPNW 168


>12_01_0038 -
           312152-312748,312930-313362,313572-314440,314535-314584,
           314589-315192,315674-315718,316100-316317,317020-317332,
           318681-318716
          Length = 1054

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = +2

Query: 377 SSPYLLHAIFFIALVGKRTYGPPAGEWLPSPMDFSNARDR 496
           S P  L+ I   A++   T+G P  +W+ +P   + A D+
Sbjct: 756 SDPSQLNFILAAAILRAETFGIPIPDWVKNPAKMAEAVDK 795


>11_01_0039 -
           290960-291086,291615-291714,291809-292013,292466-292513,
           295071-295646,295828-296260,296470-297338,297433-298227,
           298709-298753,299135-299352,300055-300364,302715-302984
          Length = 1331

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = +2

Query: 377 SSPYLLHAIFFIALVGKRTYGPPAGEWLPSPMDFSNARDR 496
           S P  L+ I   A++   T+G P  +W+ +P   + A D+
Sbjct: 880 SDPSQLNFILAAAILRAETFGIPIPDWVKNPAKMAEAVDK 919


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,944,831
Number of Sequences: 37544
Number of extensions: 394612
Number of successful extensions: 837
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 812
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 837
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2027850416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)