BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= an--0628 (759 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 11_06_0449 + 23741072-23741506,23741599-23741783,23742172-23742307 29 4.0 12_01_0038 - 312152-312748,312930-313362,313572-314440,314535-31... 28 9.3 11_01_0039 - 290960-291086,291615-291714,291809-292013,292466-29... 28 9.3 >11_06_0449 + 23741072-23741506,23741599-23741783,23742172-23742307 Length = 251 Score = 29.1 bits (62), Expect = 4.0 Identities = 12/23 (52%), Positives = 16/23 (69%), Gaps = 3/23 (13%) Frame = +3 Query: 567 KLNIYVFTG---NTVLQFLNENW 626 KL +YVF G N+V+ F+N NW Sbjct: 146 KLQVYVFCGPLINSVINFINPNW 168 >12_01_0038 - 312152-312748,312930-313362,313572-314440,314535-314584, 314589-315192,315674-315718,316100-316317,317020-317332, 318681-318716 Length = 1054 Score = 27.9 bits (59), Expect = 9.3 Identities = 12/40 (30%), Positives = 21/40 (52%) Frame = +2 Query: 377 SSPYLLHAIFFIALVGKRTYGPPAGEWLPSPMDFSNARDR 496 S P L+ I A++ T+G P +W+ +P + A D+ Sbjct: 756 SDPSQLNFILAAAILRAETFGIPIPDWVKNPAKMAEAVDK 795 >11_01_0039 - 290960-291086,291615-291714,291809-292013,292466-292513, 295071-295646,295828-296260,296470-297338,297433-298227, 298709-298753,299135-299352,300055-300364,302715-302984 Length = 1331 Score = 27.9 bits (59), Expect = 9.3 Identities = 12/40 (30%), Positives = 21/40 (52%) Frame = +2 Query: 377 SSPYLLHAIFFIALVGKRTYGPPAGEWLPSPMDFSNARDR 496 S P L+ I A++ T+G P +W+ +P + A D+ Sbjct: 880 SDPSQLNFILAAAILRAETFGIPIPDWVKNPAKMAEAVDK 919 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 18,944,831 Number of Sequences: 37544 Number of extensions: 394612 Number of successful extensions: 837 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 812 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 837 length of database: 14,793,348 effective HSP length: 80 effective length of database: 11,789,828 effective search space used: 2027850416 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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