BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= an--0624 (465 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 05_05_0165 + 22851863-22852566,22852811-22852964,22853112-228532... 29 1.4 07_03_1486 + 26899479-26899549,26899861-26899989,26900649-269008... 28 4.3 02_01_0477 + 3431509-3431551,3432243-3432319,3432417-3432542,343... 27 7.4 11_06_0766 - 27115441-27115760,27115878-27116025,27116213-271174... 27 9.8 10_01_0083 - 1046086-1047086,1047976-1048161,1048266-1049247 27 9.8 >05_05_0165 + 22851863-22852566,22852811-22852964,22853112-22853261, 22853769-22853930,22854070-22854242,22854330-22854396, 22854556-22854722,22855216-22855374,22856187-22856276, 22856392-22856483,22856587-22856681,22857328-22857405, 22858364-22858459,22859132-22859206,22859290-22859381, 22859462-22859624,22859734-22859794,22860016-22860116, 22860567-22860614 Length = 908 Score = 29.5 bits (63), Expect = 1.4 Identities = 12/20 (60%), Positives = 15/20 (75%) Frame = -1 Query: 462 HRPNKHKSVFFAISSHLQLL 403 HRP+KHKS+ F + S L LL Sbjct: 252 HRPSKHKSIDFHVPSGLNLL 271 >07_03_1486 + 26899479-26899549,26899861-26899989,26900649-26900834, 26901025-26901247,26901662-26901666,26901796-26901924, 26902697-26902894,26903138-26903356,26903461-26903699, 26903797-26903888,26904009-26904224,26904327-26904554, 26904631-26904722,26904806-26904899,26905475-26905567, 26905667-26906640,26906727-26906841,26907135-26908895 Length = 1687 Score = 27.9 bits (59), Expect = 4.3 Identities = 17/58 (29%), Positives = 29/58 (50%) Frame = +1 Query: 163 GVFIQAFMVGLIFAKLARAKKRNTTLLFSRNAVICLRDGEFCLLFRVGDIRKSHILEA 336 G ++ + L AK++R + + +LF+R R G F FR+ RK+ L+A Sbjct: 643 GYKVEPAELSLDLAKMSREIRGSPDILFAREVARACRMGNFIAFFRLA--RKATYLQA 698 >02_01_0477 + 3431509-3431551,3432243-3432319,3432417-3432542, 3432638-3432715,3432797-3432952,3433044-3433140, 3433595-3433817,3440445-3440760,3440895-3441390, 3441485-3441651 Length = 592 Score = 27.1 bits (57), Expect = 7.4 Identities = 14/46 (30%), Positives = 23/46 (50%) Frame = +1 Query: 196 IFAKLARAKKRNTTLLFSRNAVICLRDGEFCLLFRVGDIRKSHILE 333 IF K K++T L FS++ ++C + L V I +I+E Sbjct: 357 IFKKFQLELKKSTRLQFSKDGILCSHILKVMLDLNVSKIPNKYIIE 402 >11_06_0766 - 27115441-27115760,27115878-27116025,27116213-27117417, 27117510-27117753,27120181-27120357 Length = 697 Score = 26.6 bits (56), Expect = 9.8 Identities = 9/21 (42%), Positives = 18/21 (85%) Frame = -1 Query: 81 LSFNRKEEAASKGVDVVEAGN 19 ++ ++E+AAS G+++V+AGN Sbjct: 25 MTVEKEEQAASTGMEIVKAGN 45 >10_01_0083 - 1046086-1047086,1047976-1048161,1048266-1049247 Length = 722 Score = 26.6 bits (56), Expect = 9.8 Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 1/75 (1%) Frame = +1 Query: 121 CPEAIFVMCIQSIVGVFIQAFMVG-LIFAKLARAKKRNTTLLFSRNAVICLRDGEFCLLF 297 C E F + + IVGV ++ L+F L R +K+ F RN L + + +F Sbjct: 377 CTEK-FPLVAKVIVGVVAGLLVLATLVFVFLLRKEKQKMREFFIRNGGPILENAKSIKIF 435 Query: 298 RVGDIRKSHILEAHV 342 R ++++ +HV Sbjct: 436 RKEELKRITKTYSHV 450 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,987,584 Number of Sequences: 37544 Number of extensions: 308469 Number of successful extensions: 691 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 679 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 691 length of database: 14,793,348 effective HSP length: 76 effective length of database: 11,940,004 effective search space used: 931320312 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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