Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0624
         (465 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_05_0165 + 22851863-22852566,22852811-22852964,22853112-228532...    29   1.4  
07_03_1486 + 26899479-26899549,26899861-26899989,26900649-269008...    28   4.3  
02_01_0477 + 3431509-3431551,3432243-3432319,3432417-3432542,343...    27   7.4  
11_06_0766 - 27115441-27115760,27115878-27116025,27116213-271174...    27   9.8  
10_01_0083 - 1046086-1047086,1047976-1048161,1048266-1049247           27   9.8  

>05_05_0165 +
           22851863-22852566,22852811-22852964,22853112-22853261,
           22853769-22853930,22854070-22854242,22854330-22854396,
           22854556-22854722,22855216-22855374,22856187-22856276,
           22856392-22856483,22856587-22856681,22857328-22857405,
           22858364-22858459,22859132-22859206,22859290-22859381,
           22859462-22859624,22859734-22859794,22860016-22860116,
           22860567-22860614
          Length = 908

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 12/20 (60%), Positives = 15/20 (75%)
 Frame = -1

Query: 462 HRPNKHKSVFFAISSHLQLL 403
           HRP+KHKS+ F + S L LL
Sbjct: 252 HRPSKHKSIDFHVPSGLNLL 271


>07_03_1486 +
           26899479-26899549,26899861-26899989,26900649-26900834,
           26901025-26901247,26901662-26901666,26901796-26901924,
           26902697-26902894,26903138-26903356,26903461-26903699,
           26903797-26903888,26904009-26904224,26904327-26904554,
           26904631-26904722,26904806-26904899,26905475-26905567,
           26905667-26906640,26906727-26906841,26907135-26908895
          Length = 1687

 Score = 27.9 bits (59), Expect = 4.3
 Identities = 17/58 (29%), Positives = 29/58 (50%)
 Frame = +1

Query: 163 GVFIQAFMVGLIFAKLARAKKRNTTLLFSRNAVICLRDGEFCLLFRVGDIRKSHILEA 336
           G  ++   + L  AK++R  + +  +LF+R      R G F   FR+   RK+  L+A
Sbjct: 643 GYKVEPAELSLDLAKMSREIRGSPDILFAREVARACRMGNFIAFFRLA--RKATYLQA 698


>02_01_0477 +
           3431509-3431551,3432243-3432319,3432417-3432542,
           3432638-3432715,3432797-3432952,3433044-3433140,
           3433595-3433817,3440445-3440760,3440895-3441390,
           3441485-3441651
          Length = 592

 Score = 27.1 bits (57), Expect = 7.4
 Identities = 14/46 (30%), Positives = 23/46 (50%)
 Frame = +1

Query: 196 IFAKLARAKKRNTTLLFSRNAVICLRDGEFCLLFRVGDIRKSHILE 333
           IF K     K++T L FS++ ++C    +  L   V  I   +I+E
Sbjct: 357 IFKKFQLELKKSTRLQFSKDGILCSHILKVMLDLNVSKIPNKYIIE 402


>11_06_0766 -
          27115441-27115760,27115878-27116025,27116213-27117417,
          27117510-27117753,27120181-27120357
          Length = 697

 Score = 26.6 bits (56), Expect = 9.8
 Identities = 9/21 (42%), Positives = 18/21 (85%)
 Frame = -1

Query: 81 LSFNRKEEAASKGVDVVEAGN 19
          ++  ++E+AAS G+++V+AGN
Sbjct: 25 MTVEKEEQAASTGMEIVKAGN 45


>10_01_0083 - 1046086-1047086,1047976-1048161,1048266-1049247
          Length = 722

 Score = 26.6 bits (56), Expect = 9.8
 Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
 Frame = +1

Query: 121 CPEAIFVMCIQSIVGVFIQAFMVG-LIFAKLARAKKRNTTLLFSRNAVICLRDGEFCLLF 297
           C E  F +  + IVGV     ++  L+F  L R +K+     F RN    L + +   +F
Sbjct: 377 CTEK-FPLVAKVIVGVVAGLLVLATLVFVFLLRKEKQKMREFFIRNGGPILENAKSIKIF 435

Query: 298 RVGDIRKSHILEAHV 342
           R  ++++     +HV
Sbjct: 436 RKEELKRITKTYSHV 450


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,987,584
Number of Sequences: 37544
Number of extensions: 308469
Number of successful extensions: 691
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 679
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 691
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 931320312
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)