Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0624
(465 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_9469| Best HMM Match : IRK (HMM E-Value=0) 175 1e-44
SB_58706| Best HMM Match : IRK (HMM E-Value=0) 130 6e-31
SB_7412| Best HMM Match : IRK (HMM E-Value=2.2e-20) 45 4e-05
SB_53498| Best HMM Match : Ion_trans (HMM E-Value=8.9e-32) 31 0.62
SB_25129| Best HMM Match : 7tm_1 (HMM E-Value=2.4e-24) 29 1.9
SB_53410| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
SB_41907| Best HMM Match : Reprolysin (HMM E-Value=9.2e-05) 28 3.3
SB_2218| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.3
SB_25711| Best HMM Match : Oxidored_q1_N (HMM E-Value=3) 28 3.3
SB_39137| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.8
SB_34706| Best HMM Match : Ion_trans_2 (HMM E-Value=2.1e-16) 27 5.8
SB_14984| Best HMM Match : 7tm_1 (HMM E-Value=2.4e-06) 27 5.8
SB_50564| Best HMM Match : Allexi_40kDa (HMM E-Value=4.3) 27 7.7
SB_32476| Best HMM Match : Ion_trans (HMM E-Value=1.7e-36) 27 7.7
>SB_9469| Best HMM Match : IRK (HMM E-Value=0)
Length = 520
Score = 175 bits (427), Expect = 1e-44
Identities = 79/134 (58%), Positives = 102/134 (76%)
Frame = +1
Query: 25 CLNNVNSFTGCFLFSVETQHTIGYGSRTTNEECPEAIFVMCIQSIVGVFIQAFMVGLIFA 204
C++NV SF FLFS+ETQ TIGYG R + ECPEAI ++ IQS+ G I A ++GLIFA
Sbjct: 166 CVHNVESFVTAFLFSLETQTTIGYGGRQISGECPEAIILLNIQSLSGFLINALIMGLIFA 225
Query: 205 KLARAKKRNTTLLFSRNAVICLRDGEFCLLFRVGDIRKSHILEAHVRAQIIRKKITREGE 384
KL+R + R T+LFS+ A++C+RDG+ CL FRVGDIRKS IL H+R Q+ R + T+EG+
Sbjct: 226 KLSRPRNRAETILFSKKALVCVRDGKMCLTFRVGDIRKSQILHCHIRVQLFRTRKTKEGQ 285
Query: 385 VLPFYQQELKVGAD 426
VLPFYQQ+LK G D
Sbjct: 286 VLPFYQQDLKTGID 299
>SB_58706| Best HMM Match : IRK (HMM E-Value=0)
Length = 385
Score = 130 bits (314), Expect = 6e-31
Identities = 68/152 (44%), Positives = 94/152 (61%), Gaps = 5/152 (3%)
Frame = +1
Query: 25 CLNNVNSFTGCFLFSVETQHTIGYGSRTTNEECPEAIFVMCIQSIVGVFIQAFMVGLIFA 204
C++NV+S+ FLFSVETQ TIGYG R ECPE + + +QS+ G+ + A ++GLIFA
Sbjct: 122 CVDNVDSWISAFLFSVETQTTIGYGGRQVTPECPEGVVCLLVQSLSGLMLSASLLGLIFA 181
Query: 205 KLARAKKRNTTLLFSRNAVICLRDGEFCLLFRVGDIRKSHILEAHVRAQIIRKKITREGE 384
KL+R + R T+ FS+ AV+ +DG+ CL+FRVGDIRKS +LE V+ I +
Sbjct: 182 KLSRPRPRAHTIRFSKRAVVSKKDGKLCLIFRVGDIRKSQLLEVTVKLHCFH-YIAGDNG 240
Query: 385 VLPFYQQELKVGADGE-----EDRLMFIWPMT 465
L F Q EL + E E R F+ P+T
Sbjct: 241 SLFFNQSELPIAFSPECEPEYEVRPFFLTPLT 272
>SB_7412| Best HMM Match : IRK (HMM E-Value=2.2e-20)
Length = 610
Score = 44.8 bits (101), Expect = 4e-05
Identities = 23/57 (40%), Positives = 38/57 (66%), Gaps = 4/57 (7%)
Frame = +1
Query: 301 VGDIR-KSHILEAHVRAQIIRKKITREGEVLPFYQQELKVGAD---GEEDRLMFIWP 459
VGDIR KS ++E+H+RA ++R+ T+EG+ + F+QQ L + D EE+++ P
Sbjct: 388 VGDIRTKSQLIESHMRAVVVRRHCTKEGKEIGFFQQGLPLRHDLICEEEEKINLFIP 444
>SB_53498| Best HMM Match : Ion_trans (HMM E-Value=8.9e-32)
Length = 294
Score = 30.7 bits (66), Expect = 0.62
Identities = 19/63 (30%), Positives = 32/63 (50%)
Frame = +1
Query: 40 NSFTGCFLFSVETQHTIGYGSRTTNEECPEAIFVMCIQSIVGVFIQAFMVGLIFAKLARA 219
+S F +++ T T+GYG T + I MC +++GV + A V +I KL+
Sbjct: 172 SSIPAAFWYTLVTMTTLGYGDITPVTFVGKIIGSMC--ALIGVLLLALPVPIIEEKLSAN 229
Query: 220 KKR 228
K+
Sbjct: 230 TKK 232
>SB_25129| Best HMM Match : 7tm_1 (HMM E-Value=2.4e-24)
Length = 540
Score = 29.1 bits (62), Expect = 1.9
Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = -1
Query: 432 FAISSHLQLLLVKGQNFPFPCYLFTYD-LSTHVCFQNVRLSYI 307
F + L LL+ + PF Y+ +YD LS +C++++ +YI
Sbjct: 57 FILGLSLSDLLIGSFSLPFWTYIVSYDFLSVGICYKSLYQTYI 99
>SB_53410| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 216
Score = 29.1 bits (62), Expect = 1.9
Identities = 19/41 (46%), Positives = 24/41 (58%), Gaps = 5/41 (12%)
Frame = -2
Query: 311 ISPTRNRRQNSPSLR-----QITAFLENRSVVLRFLALASF 204
I+PTRNR SPS R I AFL+ RS +R + +SF
Sbjct: 62 INPTRNRLYYSPSPRGFGQWWIAAFLQGRSQSVRIGSASSF 102
>SB_41907| Best HMM Match : Reprolysin (HMM E-Value=9.2e-05)
Length = 656
Score = 28.3 bits (60), Expect = 3.3
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Frame = +1
Query: 37 VNSFTG---CFLFSVETQHTIGYGSRTTNEECPEAIFVM 144
VNS+ G L + E HT+G EECP+ F+M
Sbjct: 331 VNSYVGLGTALLITHEIGHTLGVRHDGGREECPDESFLM 369
>SB_2218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 100
Score = 28.3 bits (60), Expect = 3.3
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +3
Query: 216 GQKT*HDAPVFEKRCYLSE-GR*ILSPIPRRGYKKVAHSGSTRAC 347
G+K H + + C+ S GR S + G + HSGST AC
Sbjct: 49 GEKRLHRLFLGDTECFASRLGRDSSSSLLHLGLHRFVHSGSTNAC 93
>SB_25711| Best HMM Match : Oxidored_q1_N (HMM E-Value=3)
Length = 166
Score = 28.3 bits (60), Expect = 3.3
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Frame = +1
Query: 37 VNSFTG---CFLFSVETQHTIGYGSRTTNEECPEAIFVM 144
VNS+ G L + E HT+G EECP+ F+M
Sbjct: 17 VNSYVGLGTALLITHEIGHTLGVRHDGGREECPDESFLM 55
>SB_39137| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 333
Score = 27.5 bits (58), Expect = 5.8
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +1
Query: 346 AQIIRKKITREGEVLPFYQQELKVGADGEED 438
+++ RK T + +VLPFY L G D EED
Sbjct: 290 SEMCRKLETEQEKVLPFYASSL--GVDEEED 318
>SB_34706| Best HMM Match : Ion_trans_2 (HMM E-Value=2.1e-16)
Length = 514
Score = 27.5 bits (58), Expect = 5.8
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Frame = +1
Query: 58 FLFSVETQHTIGYGSRTTNEECPEAIF--VMCIQSIV-GVFIQAFMVGLIFAKLA 213
F +++ T T+GYG R+ P++ F V CI I+ GV I + L+ A L+
Sbjct: 240 FWWALVTMTTVGYGDRS-----PKSAFGRVFCIVWIITGVIIVSIFTALVTASLS 289
>SB_14984| Best HMM Match : 7tm_1 (HMM E-Value=2.4e-06)
Length = 269
Score = 27.5 bits (58), Expect = 5.8
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +3
Query: 120 MPRSDIRHVHTKYCRSFHSSFH 185
+P S HVH +CR FH H
Sbjct: 246 LPISVFLHVHVSHCRQFHRHDH 267
>SB_50564| Best HMM Match : Allexi_40kDa (HMM E-Value=4.3)
Length = 290
Score = 27.1 bits (57), Expect = 7.7
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = -2
Query: 188 TMKA*MKTPTILCMHMTNIASGHSSF 111
T+K+ ++ PT +HMT+ S HSS+
Sbjct: 252 TIKSYLRHPTHCTVHMTHNTSSHSSY 277
>SB_32476| Best HMM Match : Ion_trans (HMM E-Value=1.7e-36)
Length = 454
Score = 27.1 bits (57), Expect = 7.7
Identities = 18/67 (26%), Positives = 29/67 (43%)
Frame = +1
Query: 43 SFTGCFLFSVETQHTIGYGSRTTNEECPEAIFVMCIQSIVGVFIQAFMVGLIFAKLARAK 222
S G F +S+ T T+GYG + + V I S+ GV + A V L + +
Sbjct: 319 SIPGAFWWSISTVTTVGYGDQYPLTASGK--IVGSILSVFGVLVVALPVFLFVSNFKKVL 376
Query: 223 KRNTTLL 243
T++
Sbjct: 377 STKCTVV 383
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,860,324
Number of Sequences: 59808
Number of extensions: 338105
Number of successful extensions: 794
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 760
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 794
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 957531822
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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