Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0624
(465 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58730-1|AAC48058.1| 514|Caenorhabditis elegans Inward rectifyi... 176 6e-45
U40947-5|AAC48070.1| 505|Caenorhabditis elegans Inward rectifyi... 170 5e-43
Z78544-4|CAB01762.3| 374|Caenorhabditis elegans Hypothetical pr... 116 6e-27
Z78062-5|CAB01500.1| 516|Caenorhabditis elegans Hypothetical pr... 30 0.71
AL021571-7|CAA16515.1| 516|Caenorhabditis elegans Hypothetical ... 30 0.71
Z22180-7|CAE17863.1| 372|Caenorhabditis elegans Hypothetical pr... 29 1.2
Z22181-4|CAA80182.1| 824|Caenorhabditis elegans Hypothetical pr... 28 2.9
AC024785-6|AAF60605.2| 467|Caenorhabditis elegans C-type lectin... 28 2.9
AL132904-3|CAB60972.1| 718|Caenorhabditis elegans Hypothetical ... 27 6.6
AL032626-16|CAA21542.1| 101|Caenorhabditis elegans Hypothetical... 27 6.6
AF098504-5|AAC67410.3| 322|Caenorhabditis elegans Serpentine re... 27 6.6
Z74030-13|CAA98445.2| 336|Caenorhabditis elegans Hypothetical p... 27 8.8
Z71261-1|CAA95801.2| 437|Caenorhabditis elegans Hypothetical pr... 27 8.8
AL132860-29|CAB60505.2| 386|Caenorhabditis elegans Hypothetical... 27 8.8
>U58730-1|AAC48058.1| 514|Caenorhabditis elegans Inward rectifying
k (potassium)channel family protein 2 protein.
Length = 514
Score = 176 bits (429), Expect = 6e-45
Identities = 83/148 (56%), Positives = 105/148 (70%)
Frame = +1
Query: 22 PCLNNVNSFTGCFLFSVETQHTIGYGSRTTNEECPEAIFVMCIQSIVGVFIQAFMVGLIF 201
PC+ NV++ FLFS TQ TIGYG R + CP I MC Q + GV Q M G+IF
Sbjct: 159 PCIVNVHNELNAFLFSFTTQTTIGYGFRYPTDACPLTIVTMCFQFMWGVMTQTLMAGIIF 218
Query: 202 AKLARAKKRNTTLLFSRNAVICLRDGEFCLLFRVGDIRKSHILEAHVRAQIIRKKITREG 381
+KLAR KR TL+FS+NAVICLRDG+ CLLFRVGD+RKS + EAHVR Q+I++ +T EG
Sbjct: 219 SKLARPIKRAATLIFSKNAVICLRDGKLCLLFRVGDMRKSSLAEAHVRLQMIKRCVTYEG 278
Query: 382 EVLPFYQQELKVGADGEEDRLMFIWPMT 465
E+LPF+Q ++ VG D DR+ IWP+T
Sbjct: 279 ELLPFHQFDMDVGYDQGLDRVFVIWPIT 306
>U40947-5|AAC48070.1| 505|Caenorhabditis elegans Inward rectifying
k (potassium)channel family protein 1 protein.
Length = 505
Score = 170 bits (413), Expect = 5e-43
Identities = 77/148 (52%), Positives = 105/148 (70%), Gaps = 1/148 (0%)
Frame = +1
Query: 25 CLNNVNSFTGCFLFSVETQHTIGYGSRTTNEECPEAIFVMCIQSIVGVFIQAFMVGLIFA 204
C+ N++S FLF+VET HTIGYG R EC A ++C+Q+I + +Q+FMVG++FA
Sbjct: 153 CVMNLDSVYSSFLFAVETHHTIGYGHRYITTECYLAGAIVCLQAICALLLQSFMVGIVFA 212
Query: 205 KLARAKKRNTTLLFSRNAVICLRDGEFCLLFRVGDIRKSHILEAHVRAQIIRKKITREGE 384
K+AR KKR T++FS AVICLRDG+ C L RVGD+R +H++EAHVR Q I + T EGE
Sbjct: 213 KMARPKKRAETIIFSDKAVICLRDGQLCFLCRVGDMRNTHLVEAHVRLQFITDRETNEGE 272
Query: 385 VLPFYQQELKVGAD-GEEDRLMFIWPMT 465
+ P +Q E+KVG ++DRL +WP T
Sbjct: 273 IEPLHQFEMKVGPSIADDDRLFLVWPTT 300
>Z78544-4|CAB01762.3| 374|Caenorhabditis elegans Hypothetical
protein K04G11.5 protein.
Length = 374
Score = 116 bits (280), Expect = 6e-27
Identities = 59/150 (39%), Positives = 88/150 (58%), Gaps = 4/150 (2%)
Frame = +1
Query: 25 CLNNVNSFTGCFLFSVETQHTIGYGSRTTNEECPEAIFVMCIQSIVGVFIQAFMVGLIFA 204
C+ NV++ FLFS+E+QHTIGYG R + CP A +C+Q +VGVF+Q + G++ A
Sbjct: 115 CIANVDTLISAFLFSMESQHTIGYGLRYMTDLCPPAYLTLCVQCVVGVFLQTILAGIVIA 174
Query: 205 KLARAKKRNTTLLFSRNAVI---CLRDGEFCLLFRVGDIR-KSHILEAHVRAQIIRKKIT 372
K+ R KKR + FSR AVI D L+ R+ DI+ K + E+HVR + KI
Sbjct: 175 KILRPKKRRQEMRFSRMAVIGPLDEHDKRPTLMIRLADIQEKLFLAESHVRLYMACSKIN 234
Query: 373 REGEVLPFYQQELKVGADGEEDRLMFIWPM 462
G+ +++ VG D DR++ +WP+
Sbjct: 235 SRGDRELIGVKDMNVGYDSGWDRVLLLWPI 264
>Z78062-5|CAB01500.1| 516|Caenorhabditis elegans Hypothetical
protein F16D3.7 protein.
Length = 516
Score = 30.3 bits (65), Expect = 0.71
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +1
Query: 109 TNEECPEAIFVM-CIQSIVGVFIQAFMVGLIFAKLARAKKRNTTLL 243
T E+ P A+ V+ CI +++ + + F L+ AR + NTTLL
Sbjct: 53 TGEQLPPAVLVLLCIPAVIIILLTIFGNLLVLFFKARVGRTNTTLL 98
>AL021571-7|CAA16515.1| 516|Caenorhabditis elegans Hypothetical
protein F16D3.7 protein.
Length = 516
Score = 30.3 bits (65), Expect = 0.71
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +1
Query: 109 TNEECPEAIFVM-CIQSIVGVFIQAFMVGLIFAKLARAKKRNTTLL 243
T E+ P A+ V+ CI +++ + + F L+ AR + NTTLL
Sbjct: 53 TGEQLPPAVLVLLCIPAVIIILLTIFGNLLVLFFKARVGRTNTTLL 98
>Z22180-7|CAE17863.1| 372|Caenorhabditis elegans Hypothetical
protein K11H3.7 protein.
Length = 372
Score = 29.5 bits (63), Expect = 1.2
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = +1
Query: 43 SFTGCFLFSVETQHTIGYGSRTTNEECPEAIFVMCIQSIVGVFIQAFM---VGLIFAKLA 213
+FTG FL+S+ TIGYG+ + + + + +I+G+ + +G + AK+
Sbjct: 121 TFTGAFLYSLTVITTIGYGNTAAKTYIGKTLTM--LYAIIGIPLMLLFLTNIGDVMAKIF 178
Query: 214 R 216
R
Sbjct: 179 R 179
>Z22181-4|CAA80182.1| 824|Caenorhabditis elegans Hypothetical
protein ZK632.5 protein.
Length = 824
Score = 28.3 bits (60), Expect = 2.9
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 6/41 (14%)
Frame = +1
Query: 85 TIGYGSRTTNEEC------PEAIFVMCIQSIVGVFIQAFMV 189
TIGY R+TNE+ PE + V +S+ ++ Q F V
Sbjct: 600 TIGYNERSTNEDSLLVVTPPEPLNVFVSKSVTDIYSQVFTV 640
>AC024785-6|AAF60605.2| 467|Caenorhabditis elegans C-type lectin
protein 74 protein.
Length = 467
Score = 28.3 bits (60), Expect = 2.9
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 5/40 (12%)
Frame = -1
Query: 399 VKGQNFPFPCYLFTYDLSTHVCFQN-----VRLSYIPDAE 295
+KG F F Y TY+ S + C N L+Y+PD E
Sbjct: 27 IKGLCFTFMPYQLTYNASRNYCHHNNPVGFSNLAYVPDKE 66
>AL132904-3|CAB60972.1| 718|Caenorhabditis elegans Hypothetical
protein Y111B2A.3 protein.
Length = 718
Score = 27.1 bits (57), Expect = 6.6
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = -2
Query: 221 LALASFANIKPTMKA*MKTPTILCMHMTNIASGHSSFVVLDP*PMVC*VSTEKRKQP 51
L A+ A KP K + TP+I+C + I + S V++ M+ + KQP
Sbjct: 299 LEYATSARSKPADKV-LLTPSIICFLLNTIDDANVSNTVIENCKMILKAIGQSMKQP 354
>AL032626-16|CAA21542.1| 101|Caenorhabditis elegans Hypothetical
protein Y37D8A.19 protein.
Length = 101
Score = 27.1 bits (57), Expect = 6.6
Identities = 11/34 (32%), Positives = 14/34 (41%)
Frame = +1
Query: 31 NNVNSFTGCFLFSVETQHTIGYGSRTTNEECPEA 132
NN N F CF S ++TN C +A
Sbjct: 24 NNANRFPSCFACSTAAGFVANIDGQSTNARCTDA 57
>AF098504-5|AAC67410.3| 322|Caenorhabditis elegans Serpentine
receptor, class t protein62 protein.
Length = 322
Score = 27.1 bits (57), Expect = 6.6
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +1
Query: 142 MCIQSIVGVFIQAFMVGLIFAKLARAKKR 228
MCI+ I G+F+ AF LI +L KK+
Sbjct: 186 MCIE-IGGIFVSAFFYILIIIRLLNTKKK 213
>Z74030-13|CAA98445.2| 336|Caenorhabditis elegans Hypothetical
protein D1054.12 protein.
Length = 336
Score = 26.6 bits (56), Expect = 8.8
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 82 HTIGYGSRTTNEECPEAIFVMCIQSIVGVFIQAFMV 189
HT+ S+ TN + F +CIQ + +F+ +F V
Sbjct: 224 HTVSK-SQVTNRLQKQFFFALCIQVFIPIFVLSFPV 258
>Z71261-1|CAA95801.2| 437|Caenorhabditis elegans Hypothetical
protein F21C3.1 protein.
Length = 437
Score = 26.6 bits (56), Expect = 8.8
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +1
Query: 31 NNVNSFTGCFLFSVETQHTIGYGSRTTNEECPEAIFVM-CIQSI 159
NN SF LF + T TIGYG+ ++ + I ++ C+ I
Sbjct: 97 NNEASFLDRALFCITTISTIGYGNIAPFDDRGKVICILYCVAGI 140
>AL132860-29|CAB60505.2| 386|Caenorhabditis elegans Hypothetical
protein Y56A3A.28 protein.
Length = 386
Score = 26.6 bits (56), Expect = 8.8
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +1
Query: 322 HILEAHVRAQIIRKKITREGEVLPFYQQELKV 417
HI+ H+R +I+ I R +P Y E +V
Sbjct: 283 HIVNHHIRNAVIKGPIMRRSRTIPRYHPEDQV 314
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,639,777
Number of Sequences: 27780
Number of extensions: 254588
Number of successful extensions: 596
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 587
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 594
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 829055604
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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