Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0622
         (690 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    25   0.44 
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    25   0.44 
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    25   0.44 
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    25   0.77 
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   4.1  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    22   5.4  

>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 25.4 bits (53), Expect = 0.44
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = +2

Query: 164 RSSALIKRTTSLQ*INCAETALRNEQALQITEDE 265
           RSS L   T+S+  +NC  T   N    Q+TE E
Sbjct: 236 RSSCLGSNTSSMLSLNCLNTGRTNFTNKQLTELE 269


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 25.4 bits (53), Expect = 0.44
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = +2

Query: 164 RSSALIKRTTSLQ*INCAETALRNEQALQITEDE 265
           RSS L   T+S+  +NC  T   N    Q+TE E
Sbjct: 25  RSSCLGSNTSSMLSLNCLNTGRTNFTNKQLTELE 58


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 25.4 bits (53), Expect = 0.44
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = +2

Query: 164 RSSALIKRTTSLQ*INCAETALRNEQALQITEDE 265
           RSS L   T+S+  +NC  T   N    Q+TE E
Sbjct: 25  RSSCLGSNTSSMLSLNCLNTGRTNFTNKQLTELE 58


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 24.6 bits (51), Expect = 0.77
 Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = +1

Query: 463 SPEAKDRTITLAEVAHH-DTPDDCWIVIYDRVYD 561
           +P ++D T TL   A +   PDDC I  Y   Y+
Sbjct: 411 APPSRDLTTTLCTKAGYVRDPDDCSIFYYCLAYN 444


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +2

Query: 455 YQAHLKPRTAQLLWQKLPTMTPPMIVG 535
           YQ  L    A  LW KL T    +++G
Sbjct: 304 YQKQLNVEHAANLWVKLGTPKEKLVIG 330


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -2

Query: 659 ECPELLKAVLASRPAYSN 606
           ECP++ + V A+ P Y++
Sbjct: 171 ECPKVNETVAATHPRYAD 188


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,239
Number of Sequences: 336
Number of extensions: 3389
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)