BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= an--0622 (690 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPCC16A11.10c |oca8||cytochrome b5 |Schizosaccharomyces pombe|ch... 85 9e-18 SPBC29A10.16c |||cytochrome b5 |Schizosaccharomyces pombe|chr 2|... 71 2e-13 SPAC1F12.10c |||NADPH-hemoprotein reductase |Schizosaccharomyces... 65 1e-11 SPCC330.03c |||NADPH-hemoprotein reductase|Schizosaccharomyces p... 53 4e-08 SPCC1281.06c |||acyl-coA desaturase |Schizosaccharomyces pombe|c... 29 0.48 SPBC1703.02 |rsc9||RSC complex subunit Rsc9|Schizosaccharomyces ... 27 1.9 SPBC1271.06c |mug96||sequence orphan|Schizosaccharomyces pombe|c... 26 4.5 SPCC569.06 |||S. pombe specific multicopy membrane protein famil... 26 4.5 SPCC1919.12c |||aminopeptidase |Schizosaccharomyces pombe|chr 3|... 25 7.8 SPCC306.11 |||sequence orphan|Schizosaccharomyces pombe|chr 3|||... 25 7.8 SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 25 7.8 SPCC285.14 |||TRAPP complex subunit Trs130 |Schizosaccharomyces ... 25 7.8 >SPCC16A11.10c |oca8||cytochrome b5 |Schizosaccharomyces pombe|chr 3|||Manual Length = 129 Score = 85.0 bits (201), Expect = 9e-18 Identities = 37/71 (52%), Positives = 52/71 (73%) Frame = +1 Query: 478 DRTITLAEVAHHDTPDDCWIVIYDRVYDISTFLDEHPGGGDIMLEYAGRDASTAFRSSGH 657 ++TIT+ EV H+T DD +IV+ D+VYDIS FLD HPGG +++++ AGRDAS F GH Sbjct: 3 EKTITVEEVLKHNTRDDLYIVVKDKVYDISKFLDAHPGGEEVLVDLAGRDASGPFEDVGH 62 Query: 658 SRMAVKALDRF 690 S A + L++F Sbjct: 63 SEDAQELLEKF 73 >SPBC29A10.16c |||cytochrome b5 |Schizosaccharomyces pombe|chr 2|||Manual Length = 124 Score = 70.9 bits (166), Expect = 2e-13 Identities = 30/62 (48%), Positives = 44/62 (70%) Frame = +1 Query: 499 EVAHHDTPDDCWIVIYDRVYDISTFLDEHPGGGDIMLEYAGRDASTAFRSSGHSRMAVKA 678 E+ H+ D ++VI +VYD+S F D+HPGG DIML+YAG+DA+ A++ GHS A + Sbjct: 10 EIVEHNNSKDMYMVINGKVYDVSNFADDHPGGLDIMLDYAGQDATKAYQDIGHSIAADEL 69 Query: 679 LD 684 L+ Sbjct: 70 LE 71 >SPAC1F12.10c |||NADPH-hemoprotein reductase |Schizosaccharomyces pombe|chr 1|||Manual Length = 147 Score = 64.9 bits (151), Expect = 1e-11 Identities = 36/114 (31%), Positives = 55/114 (48%), Gaps = 4/114 (3%) Frame = +1 Query: 313 HTTNEVNLSAPTPNQXXXXXXXXXXXXXXRFVNPWSVNTEQKQWTEVVPG----SPEAKD 480 H T ++ +S + N ++V P Q W+++V S K Sbjct: 15 HQTPQIRISPASSNVEHSEKQPRRDFRVKKYVAP---GFSQLNWSKLVASGQNLSGVEKP 71 Query: 481 RTITLAEVAHHDTPDDCWIVIYDRVYDISTFLDEHPGGGDIMLEYAGRDASTAF 642 +T E+A H T +DCWI I +VY++S +L HP G +L+YAGRDA+ F Sbjct: 72 IPVTKEELAKHKTKEDCWIAIRGKVYNVSAYLPYHPAGQKRILDYAGRDATVIF 125 >SPCC330.03c |||NADPH-hemoprotein reductase|Schizosaccharomyces pombe|chr 3|||Manual Length = 145 Score = 52.8 bits (121), Expect = 4e-08 Identities = 20/53 (37%), Positives = 36/53 (67%) Frame = +1 Query: 484 TITLAEVAHHDTPDDCWIVIYDRVYDISTFLDEHPGGGDIMLEYAGRDASTAF 642 ++T E+A H +PDDCW+ I +VY+++ +L HP G +L+++G DA+ + Sbjct: 71 SVTAEELAKHCSPDDCWMAIRGKVYNVTAYLPYHPVGPKKILKHSGVDATKPY 123 >SPCC1281.06c |||acyl-coA desaturase |Schizosaccharomyces pombe|chr 3|||Manual Length = 479 Score = 29.5 bits (63), Expect = 0.48 Identities = 14/36 (38%), Positives = 23/36 (63%) Frame = +1 Query: 535 IVIYDRVYDISTFLDEHPGGGDIMLEYAGRDASTAF 642 ++I V+D++ F EHPGG ++ G+DA+ AF Sbjct: 376 VLINGVVHDMTGF--EHPGGQGLLRSAFGKDATAAF 409 >SPBC1703.02 |rsc9||RSC complex subunit Rsc9|Schizosaccharomyces pombe|chr 2|||Manual Length = 780 Score = 27.5 bits (58), Expect = 1.9 Identities = 13/32 (40%), Positives = 17/32 (53%) Frame = -3 Query: 670 QPCESAQNS*KPCLRLGLRTPTLYRHRQDARL 575 QPC +S K C L L TP L+ H Q+ + Sbjct: 620 QPCRWCLDSGKECGELLLGTPLLHSHLQEMHI 651 >SPBC1271.06c |mug96||sequence orphan|Schizosaccharomyces pombe|chr 2|||Manual Length = 146 Score = 26.2 bits (55), Expect = 4.5 Identities = 13/50 (26%), Positives = 28/50 (56%), Gaps = 1/50 (2%) Frame = -2 Query: 335 KFTSLVVCTV-VIFAFNFKLIFELLRPQ*FVELVRFLTRSQHN*SIADLW 189 +++ ++ C V ++ + +++ F LR +E + QHN ++ADLW Sbjct: 87 RYSLILTCLVAILLSVLWRIQFAALRMHDLIEEELKMFVLQHNCTLADLW 136 >SPCC569.06 |||S. pombe specific multicopy membrane protein family 1|Schizosaccharomyces pombe|chr 3|||Manual Length = 478 Score = 26.2 bits (55), Expect = 4.5 Identities = 15/45 (33%), Positives = 25/45 (55%) Frame = -2 Query: 395 AAIVSAIRSKSAS*FGVGADKFTSLVVCTVVIFAFNFKLIFELLR 261 A + R K AS F + F +L + +++FAFN +IF+ L+ Sbjct: 373 AVLAFRFRLKKASQFDTRWNLF-ALTLAIIILFAFNDLVIFDKLQ 416 >SPCC1919.12c |||aminopeptidase |Schizosaccharomyces pombe|chr 3|||Manual Length = 843 Score = 25.4 bits (53), Expect = 7.8 Identities = 14/43 (32%), Positives = 19/43 (44%) Frame = +1 Query: 418 SVNTEQKQWTEVVPGSPEAKDRTITLAEVAHHDTPDDCWIVIY 546 S+NT Q S + +I L+ AH D+ W VIY Sbjct: 530 SINTSSHQHYGSTLNSTPHRRNSIALSNRAHVKLIDNIWTVIY 572 >SPCC306.11 |||sequence orphan|Schizosaccharomyces pombe|chr 3|||Manual Length = 283 Score = 25.4 bits (53), Expect = 7.8 Identities = 15/50 (30%), Positives = 23/50 (46%) Frame = +1 Query: 454 VPGSPEAKDRTITLAEVAHHDTPDDCWIVIYDRVYDISTFLDEHPGGGDI 603 +PG+P K R I+L + A PD + Y+IS H G ++ Sbjct: 29 IPGAPACKRREISLYKRATDTFPDLSSAIASTSYYNISEGTYCHVSGSNL 78 >SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr 1|||Manual Length = 198 Score = 25.4 bits (53), Expect = 7.8 Identities = 13/65 (20%), Positives = 29/65 (44%) Frame = +1 Query: 430 EQKQWTEVVPGSPEAKDRTITLAEVAHHDTPDDCWIVIYDRVYDISTFLDEHPGGGDIML 609 +Q++ T+ +A ++ +H + ++ +V+D+ + E GD +L Sbjct: 134 DQEEITKQARRYAKAMKASLVFCSTSHSINVQKIFKIVLAKVFDLKCTIPEIKNVGDPIL 193 Query: 610 EYAGR 624 EY R Sbjct: 194 EYIDR 198 >SPCC285.14 |||TRAPP complex subunit Trs130 |Schizosaccharomyces pombe|chr 3|||Manual Length = 1150 Score = 25.4 bits (53), Expect = 7.8 Identities = 11/27 (40%), Positives = 17/27 (62%), Gaps = 1/27 (3%) Frame = -2 Query: 131 ISGNDCHTNCHYATVVRI-LAYSSQCL 54 +S DC T+CH+ + + I L +S CL Sbjct: 870 LSPMDCFTSCHFDSDMSIDLKFSMNCL 896 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,840,404 Number of Sequences: 5004 Number of extensions: 56732 Number of successful extensions: 157 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 152 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 157 length of database: 2,362,478 effective HSP length: 70 effective length of database: 2,012,198 effective search space used: 319939482 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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