BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= an--0620 (636 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U10402-2|AAA19068.2| 538|Caenorhabditis elegans Atp synthase su... 234 4e-62 AL023815-4|CAF31480.1| 511|Caenorhabditis elegans Hypothetical ... 67 1e-11 AL023815-1|CAA19429.1| 538|Caenorhabditis elegans Hypothetical ... 67 1e-11 U41015-2|AAA82311.1| 491|Caenorhabditis elegans Vacuolar h atpa... 53 2e-07 AC006708-2|AAF60418.1| 501|Caenorhabditis elegans Temporarily a... 49 3e-06 AL023815-3|CAD92384.1| 503|Caenorhabditis elegans Hypothetical ... 47 1e-05 AL033512-1|CAA22076.1| 606|Caenorhabditis elegans Hypothetical ... 32 0.40 U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 31 0.91 U42830-4|AAC48277.1| 487|Caenorhabditis elegans Neuronal igcam ... 29 2.1 AL132898-6|CAC14409.1| 187|Caenorhabditis elegans Hypothetical ... 28 6.4 AL132898-5|CAC14408.1| 316|Caenorhabditis elegans Hypothetical ... 28 6.4 Z78418-3|CAB01697.1| 932|Caenorhabditis elegans Hypothetical pr... 27 8.5 U42831-1|AAA83513.2| 614|Caenorhabditis elegans Hypothetical pr... 27 8.5 >U10402-2|AAA19068.2| 538|Caenorhabditis elegans Atp synthase subunit protein 2 protein. Length = 538 Score = 234 bits (572), Expect = 4e-62 Identities = 111/134 (82%), Positives = 122/134 (91%) Frame = +3 Query: 234 DVQFEDNLPPILNALEVQNRSPRLVLEVAQHLGENTVRTIAMDGTEGLVRGQPVLDSGSP 413 DVQF++NLPPILN LEV RSPRL+LEV+QHLG+N VR IAMDGTEGLVRGQPV D+G P Sbjct: 81 DVQFDENLPPILNGLEVVGRSPRLILEVSQHLGDNVVRCIAMDGTEGLVRGQPVADTGDP 140 Query: 414 IRIPVGAETLGRIINVIGEPIDERGPIPTDKTAAIHAEAPEFVDMSVQQEILVTGIKVVD 593 I+IPVG ETLGRI+NVIGEPIDERGPI + AAIHAEAPEFV+MSV+QEILVTGIKVVD Sbjct: 141 IKIPVGPETLGRIMNVIGEPIDERGPIASKNFAAIHAEAPEFVEMSVEQEILVTGIKVVD 200 Query: 594 LLAPYAKGGKIGLF 635 LLAPYAKGGKIGLF Sbjct: 201 LLAPYAKGGKIGLF 214 >AL023815-4|CAF31480.1| 511|Caenorhabditis elegans Hypothetical protein H28O16.1d protein. Length = 511 Score = 66.9 bits (156), Expect = 1e-11 Identities = 31/101 (30%), Positives = 55/101 (54%) Frame = +3 Query: 315 VAQHLGENTVRTIAMDGTEGLVRGQPVLDSGSPIRIPVGAETLGRIINVIGEPIDERGPI 494 +A +L + V + + + G V +G+ + +PVG LGR+++ +G PID +GPI Sbjct: 63 MAMNLDVDNVGVVVFGNDKVIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPI 122 Query: 495 PTDKTAAIHAEAPEFVDMSVQQEILVTGIKVVDLLAPYAKG 617 + + + +AP + +E +VTG+K VD L P +G Sbjct: 123 ANARRSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRG 163 >AL023815-1|CAA19429.1| 538|Caenorhabditis elegans Hypothetical protein H28O16.1a protein. Length = 538 Score = 66.9 bits (156), Expect = 1e-11 Identities = 31/101 (30%), Positives = 55/101 (54%) Frame = +3 Query: 315 VAQHLGENTVRTIAMDGTEGLVRGQPVLDSGSPIRIPVGAETLGRIINVIGEPIDERGPI 494 +A +L + V + + + G V +G+ + +PVG LGR+++ +G PID +GPI Sbjct: 90 MAMNLDVDNVGVVVFGNDKVIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPI 149 Query: 495 PTDKTAAIHAEAPEFVDMSVQQEILVTGIKVVDLLAPYAKG 617 + + + +AP + +E +VTG+K VD L P +G Sbjct: 150 ANARRSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRG 190 >U41015-2|AAA82311.1| 491|Caenorhabditis elegans Vacuolar h atpase protein 12 protein. Length = 491 Score = 52.8 bits (121), Expect = 2e-07 Identities = 29/104 (27%), Positives = 52/104 (50%), Gaps = 1/104 (0%) Frame = +3 Query: 327 LGENTVRTIAMDGTEGLVRGQPVLD-SGSPIRIPVGAETLGRIINVIGEPIDERGPIPTD 503 + +N +GT G+ + + +G +R PV + LGRI N G+PID+ P+ + Sbjct: 71 ISKNKAVVQVFEGTSGIDAKNTICEFTGDILRTPVSEDMLGRIFNGSGKPIDKGPPVLAE 130 Query: 504 KTAAIHAEAPEFVDMSVQQEILVTGIKVVDLLAPYAKGGKIGLF 635 I+ + +E++ TGI +D++ A+G KI +F Sbjct: 131 DFLDINGQPINPWSRIYPEEMIQTGISAIDVMNSIARGQKIPIF 174 >AC006708-2|AAF60418.1| 501|Caenorhabditis elegans Temporarily assigned gene nameprotein 300 protein. Length = 501 Score = 48.8 bits (111), Expect = 3e-06 Identities = 25/78 (32%), Positives = 42/78 (53%) Frame = +3 Query: 402 SGSPIRIPVGAETLGRIINVIGEPIDERGPIPTDKTAAIHAEAPEFVDMSVQQEILVTGI 581 +G R PV + LGRI N G+PID+ P+ + I+ + + +E++ TGI Sbjct: 109 TGDIFRSPVSLDMLGRIFNGSGKPIDKGPPVLPEDYLDINGQPINPFNRIYPEEMIQTGI 168 Query: 582 KVVDLLAPYAKGGKIGLF 635 +D++ A+G KI +F Sbjct: 169 SAIDVMNSIARGQKIPIF 186 >AL023815-3|CAD92384.1| 503|Caenorhabditis elegans Hypothetical protein H28O16.1c protein. Length = 503 Score = 46.8 bits (106), Expect = 1e-05 Identities = 20/53 (37%), Positives = 31/53 (58%) Frame = +3 Query: 459 VIGEPIDERGPIPTDKTAAIHAEAPEFVDMSVQQEILVTGIKVVDLLAPYAKG 617 V+G PID +GPI + + + +AP + +E +VTG+K VD L P +G Sbjct: 103 VLGNPIDGKGPIANARRSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRG 155 >AL033512-1|CAA22076.1| 606|Caenorhabditis elegans Hypothetical protein Y49A3A.2 protein. Length = 606 Score = 31.9 bits (69), Expect = 0.40 Identities = 13/39 (33%), Positives = 22/39 (56%) Frame = +3 Query: 366 TEGLVRGQPVLDSGSPIRIPVGAETLGRIINVIGEPIDE 482 T G+ G PVL +G P+ + +G +G I + I P+ + Sbjct: 59 TSGVTIGDPVLRTGKPLSVELGPGIMGSIFDGIQRPLKD 97 >U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical protein C12D12.1a protein. Length = 769 Score = 30.7 bits (66), Expect = 0.91 Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 5/81 (6%) Frame = -3 Query: 586 TFIPVTRISCCTDMSTNSGASA*IAAVLSVGMGPRS-SIGSPITL-MMRPRV---SAPTG 422 TF PVT +S + +T + + + P + + +P T+ M P + P Sbjct: 468 TFYPVTTVSTMSPPTTVTVPTTPTPVPTTTNTPPANPTTATPTTVGTMTPSTGTTTVPVP 527 Query: 421 IRIGEPESSTGCPRTKPSVPS 359 G P + T P TKP+VPS Sbjct: 528 TTTGSPTTQTTAPVTKPTVPS 548 >U42830-4|AAC48277.1| 487|Caenorhabditis elegans Neuronal igcam protein 3 protein. Length = 487 Score = 29.5 bits (63), Expect = 2.1 Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 1/66 (1%) Frame = +3 Query: 360 DGTEGLVRGQPV-LDSGSPIRIPVGAETLGRIINVIGEPIDERGPIPTDKTAAIHAEAPE 536 D +G + G+P+ +D G ++ P G E + ++ N GEP+DE A I + E Sbjct: 152 DTVKGALLGEPITIDCG--VKGPSGKEPMIQMTNGNGEPLDEEIWTIAGNEATIDSLKKE 209 Query: 537 FVDMSV 554 +++V Sbjct: 210 HAELTV 215 >AL132898-6|CAC14409.1| 187|Caenorhabditis elegans Hypothetical protein Y59A8B.9 protein. Length = 187 Score = 27.9 bits (59), Expect = 6.4 Identities = 19/73 (26%), Positives = 27/73 (36%) Frame = -3 Query: 547 MSTNSGASA*IAAVLSVGMGPRSSIGSPITLMMRPRVSAPTGIRIGEPESSTGCPRTKPS 368 + T G +A +A M RS P+T M P + P S+ PR Sbjct: 9 LPTEGGPAAGASAKTPSRMPARSVPQKPVTTMRTPAATPAAPPTRPTPSRSSAAPRATAP 68 Query: 367 VPSMAMVRTVFSP 329 P+ A +T P Sbjct: 69 TPTAAPPKTCAPP 81 >AL132898-5|CAC14408.1| 316|Caenorhabditis elegans Hypothetical protein Y59A8B.7 protein. Length = 316 Score = 27.9 bits (59), Expect = 6.4 Identities = 19/73 (26%), Positives = 27/73 (36%) Frame = -3 Query: 547 MSTNSGASA*IAAVLSVGMGPRSSIGSPITLMMRPRVSAPTGIRIGEPESSTGCPRTKPS 368 + T G +A +A M RS P+T M P + P S+ PR Sbjct: 138 LPTEGGPAAGASAKTPSRMPARSVPQKPVTTMRTPAATPAAPPTRPTPSRSSAAPRATAP 197 Query: 367 VPSMAMVRTVFSP 329 P+ A +T P Sbjct: 198 TPTAAPPKTCAPP 210 >Z78418-3|CAB01697.1| 932|Caenorhabditis elegans Hypothetical protein F25D7.4 protein. Length = 932 Score = 27.5 bits (58), Expect = 8.5 Identities = 15/48 (31%), Positives = 25/48 (52%) Frame = -3 Query: 475 IGSPITLMMRPRVSAPTGIRIGEPESSTGCPRTKPSVPSMAMVRTVFS 332 +G P + RP P+ S+TG RT+P+VP+++ R + S Sbjct: 284 LGIPAPAVPRPVAGKPST----RSASTTGAARTRPAVPAVSAPRALTS 327 >U42831-1|AAA83513.2| 614|Caenorhabditis elegans Hypothetical protein R11B5.1 protein. Length = 614 Score = 27.5 bits (58), Expect = 8.5 Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 16/53 (30%) Frame = -2 Query: 614 FGIRSEQIDDFYTSYENLL------LHRHVDKL----------WSFSMNSSSL 504 FG++ Q+ +++ +Y+ L LH+H+DKL W+F+M + SL Sbjct: 433 FGLKQPQMTEYFIAYDRYLEQELPALHQHLDKLDVRPDLYLIEWTFAMYAKSL 485 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,960,766 Number of Sequences: 27780 Number of extensions: 315344 Number of successful extensions: 843 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 774 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 842 length of database: 12,740,198 effective HSP length: 78 effective length of database: 10,573,358 effective search space used: 1406256614 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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