Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0620
         (636 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U10402-2|AAA19068.2|  538|Caenorhabditis elegans Atp synthase su...   234   4e-62
AL023815-4|CAF31480.1|  511|Caenorhabditis elegans Hypothetical ...    67   1e-11
AL023815-1|CAA19429.1|  538|Caenorhabditis elegans Hypothetical ...    67   1e-11
U41015-2|AAA82311.1|  491|Caenorhabditis elegans Vacuolar h atpa...    53   2e-07
AC006708-2|AAF60418.1|  501|Caenorhabditis elegans Temporarily a...    49   3e-06
AL023815-3|CAD92384.1|  503|Caenorhabditis elegans Hypothetical ...    47   1e-05
AL033512-1|CAA22076.1|  606|Caenorhabditis elegans Hypothetical ...    32   0.40 
U51998-7|AAA96080.2|  769|Caenorhabditis elegans Hypothetical pr...    31   0.91 
U42830-4|AAC48277.1|  487|Caenorhabditis elegans Neuronal igcam ...    29   2.1  
AL132898-6|CAC14409.1|  187|Caenorhabditis elegans Hypothetical ...    28   6.4  
AL132898-5|CAC14408.1|  316|Caenorhabditis elegans Hypothetical ...    28   6.4  
Z78418-3|CAB01697.1|  932|Caenorhabditis elegans Hypothetical pr...    27   8.5  
U42831-1|AAA83513.2|  614|Caenorhabditis elegans Hypothetical pr...    27   8.5  

>U10402-2|AAA19068.2|  538|Caenorhabditis elegans Atp synthase
           subunit protein 2 protein.
          Length = 538

 Score =  234 bits (572), Expect = 4e-62
 Identities = 111/134 (82%), Positives = 122/134 (91%)
 Frame = +3

Query: 234 DVQFEDNLPPILNALEVQNRSPRLVLEVAQHLGENTVRTIAMDGTEGLVRGQPVLDSGSP 413
           DVQF++NLPPILN LEV  RSPRL+LEV+QHLG+N VR IAMDGTEGLVRGQPV D+G P
Sbjct: 81  DVQFDENLPPILNGLEVVGRSPRLILEVSQHLGDNVVRCIAMDGTEGLVRGQPVADTGDP 140

Query: 414 IRIPVGAETLGRIINVIGEPIDERGPIPTDKTAAIHAEAPEFVDMSVQQEILVTGIKVVD 593
           I+IPVG ETLGRI+NVIGEPIDERGPI +   AAIHAEAPEFV+MSV+QEILVTGIKVVD
Sbjct: 141 IKIPVGPETLGRIMNVIGEPIDERGPIASKNFAAIHAEAPEFVEMSVEQEILVTGIKVVD 200

Query: 594 LLAPYAKGGKIGLF 635
           LLAPYAKGGKIGLF
Sbjct: 201 LLAPYAKGGKIGLF 214


>AL023815-4|CAF31480.1|  511|Caenorhabditis elegans Hypothetical
           protein H28O16.1d protein.
          Length = 511

 Score = 66.9 bits (156), Expect = 1e-11
 Identities = 31/101 (30%), Positives = 55/101 (54%)
 Frame = +3

Query: 315 VAQHLGENTVRTIAMDGTEGLVRGQPVLDSGSPIRIPVGAETLGRIINVIGEPIDERGPI 494
           +A +L  + V  +     + +  G  V  +G+ + +PVG   LGR+++ +G PID +GPI
Sbjct: 63  MAMNLDVDNVGVVVFGNDKVIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPI 122

Query: 495 PTDKTAAIHAEAPEFVDMSVQQEILVTGIKVVDLLAPYAKG 617
              + + +  +AP  +     +E +VTG+K VD L P  +G
Sbjct: 123 ANARRSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRG 163


>AL023815-1|CAA19429.1|  538|Caenorhabditis elegans Hypothetical
           protein H28O16.1a protein.
          Length = 538

 Score = 66.9 bits (156), Expect = 1e-11
 Identities = 31/101 (30%), Positives = 55/101 (54%)
 Frame = +3

Query: 315 VAQHLGENTVRTIAMDGTEGLVRGQPVLDSGSPIRIPVGAETLGRIINVIGEPIDERGPI 494
           +A +L  + V  +     + +  G  V  +G+ + +PVG   LGR+++ +G PID +GPI
Sbjct: 90  MAMNLDVDNVGVVVFGNDKVIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPI 149

Query: 495 PTDKTAAIHAEAPEFVDMSVQQEILVTGIKVVDLLAPYAKG 617
              + + +  +AP  +     +E +VTG+K VD L P  +G
Sbjct: 150 ANARRSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRG 190


>U41015-2|AAA82311.1|  491|Caenorhabditis elegans Vacuolar h atpase
           protein 12 protein.
          Length = 491

 Score = 52.8 bits (121), Expect = 2e-07
 Identities = 29/104 (27%), Positives = 52/104 (50%), Gaps = 1/104 (0%)
 Frame = +3

Query: 327 LGENTVRTIAMDGTEGLVRGQPVLD-SGSPIRIPVGAETLGRIINVIGEPIDERGPIPTD 503
           + +N       +GT G+     + + +G  +R PV  + LGRI N  G+PID+  P+  +
Sbjct: 71  ISKNKAVVQVFEGTSGIDAKNTICEFTGDILRTPVSEDMLGRIFNGSGKPIDKGPPVLAE 130

Query: 504 KTAAIHAEAPEFVDMSVQQEILVTGIKVVDLLAPYAKGGKIGLF 635
               I+ +          +E++ TGI  +D++   A+G KI +F
Sbjct: 131 DFLDINGQPINPWSRIYPEEMIQTGISAIDVMNSIARGQKIPIF 174


>AC006708-2|AAF60418.1|  501|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 300 protein.
          Length = 501

 Score = 48.8 bits (111), Expect = 3e-06
 Identities = 25/78 (32%), Positives = 42/78 (53%)
 Frame = +3

Query: 402 SGSPIRIPVGAETLGRIINVIGEPIDERGPIPTDKTAAIHAEAPEFVDMSVQQEILVTGI 581
           +G   R PV  + LGRI N  G+PID+  P+  +    I+ +     +    +E++ TGI
Sbjct: 109 TGDIFRSPVSLDMLGRIFNGSGKPIDKGPPVLPEDYLDINGQPINPFNRIYPEEMIQTGI 168

Query: 582 KVVDLLAPYAKGGKIGLF 635
             +D++   A+G KI +F
Sbjct: 169 SAIDVMNSIARGQKIPIF 186


>AL023815-3|CAD92384.1|  503|Caenorhabditis elegans Hypothetical
           protein H28O16.1c protein.
          Length = 503

 Score = 46.8 bits (106), Expect = 1e-05
 Identities = 20/53 (37%), Positives = 31/53 (58%)
 Frame = +3

Query: 459 VIGEPIDERGPIPTDKTAAIHAEAPEFVDMSVQQEILVTGIKVVDLLAPYAKG 617
           V+G PID +GPI   + + +  +AP  +     +E +VTG+K VD L P  +G
Sbjct: 103 VLGNPIDGKGPIANARRSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRG 155


>AL033512-1|CAA22076.1|  606|Caenorhabditis elegans Hypothetical
           protein Y49A3A.2 protein.
          Length = 606

 Score = 31.9 bits (69), Expect = 0.40
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = +3

Query: 366 TEGLVRGQPVLDSGSPIRIPVGAETLGRIINVIGEPIDE 482
           T G+  G PVL +G P+ + +G   +G I + I  P+ +
Sbjct: 59  TSGVTIGDPVLRTGKPLSVELGPGIMGSIFDGIQRPLKD 97


>U51998-7|AAA96080.2|  769|Caenorhabditis elegans Hypothetical
           protein C12D12.1a protein.
          Length = 769

 Score = 30.7 bits (66), Expect = 0.91
 Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 5/81 (6%)
 Frame = -3

Query: 586 TFIPVTRISCCTDMSTNSGASA*IAAVLSVGMGPRS-SIGSPITL-MMRPRV---SAPTG 422
           TF PVT +S  +  +T +  +       +    P + +  +P T+  M P     + P  
Sbjct: 468 TFYPVTTVSTMSPPTTVTVPTTPTPVPTTTNTPPANPTTATPTTVGTMTPSTGTTTVPVP 527

Query: 421 IRIGEPESSTGCPRTKPSVPS 359
              G P + T  P TKP+VPS
Sbjct: 528 TTTGSPTTQTTAPVTKPTVPS 548


>U42830-4|AAC48277.1|  487|Caenorhabditis elegans Neuronal igcam
           protein 3 protein.
          Length = 487

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
 Frame = +3

Query: 360 DGTEGLVRGQPV-LDSGSPIRIPVGAETLGRIINVIGEPIDERGPIPTDKTAAIHAEAPE 536
           D  +G + G+P+ +D G  ++ P G E + ++ N  GEP+DE         A I +   E
Sbjct: 152 DTVKGALLGEPITIDCG--VKGPSGKEPMIQMTNGNGEPLDEEIWTIAGNEATIDSLKKE 209

Query: 537 FVDMSV 554
             +++V
Sbjct: 210 HAELTV 215


>AL132898-6|CAC14409.1|  187|Caenorhabditis elegans Hypothetical
           protein Y59A8B.9 protein.
          Length = 187

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 19/73 (26%), Positives = 27/73 (36%)
 Frame = -3

Query: 547 MSTNSGASA*IAAVLSVGMGPRSSIGSPITLMMRPRVSAPTGIRIGEPESSTGCPRTKPS 368
           + T  G +A  +A     M  RS    P+T M  P  +         P  S+  PR    
Sbjct: 9   LPTEGGPAAGASAKTPSRMPARSVPQKPVTTMRTPAATPAAPPTRPTPSRSSAAPRATAP 68

Query: 367 VPSMAMVRTVFSP 329
            P+ A  +T   P
Sbjct: 69  TPTAAPPKTCAPP 81


>AL132898-5|CAC14408.1|  316|Caenorhabditis elegans Hypothetical
           protein Y59A8B.7 protein.
          Length = 316

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 19/73 (26%), Positives = 27/73 (36%)
 Frame = -3

Query: 547 MSTNSGASA*IAAVLSVGMGPRSSIGSPITLMMRPRVSAPTGIRIGEPESSTGCPRTKPS 368
           + T  G +A  +A     M  RS    P+T M  P  +         P  S+  PR    
Sbjct: 138 LPTEGGPAAGASAKTPSRMPARSVPQKPVTTMRTPAATPAAPPTRPTPSRSSAAPRATAP 197

Query: 367 VPSMAMVRTVFSP 329
            P+ A  +T   P
Sbjct: 198 TPTAAPPKTCAPP 210


>Z78418-3|CAB01697.1|  932|Caenorhabditis elegans Hypothetical
           protein F25D7.4 protein.
          Length = 932

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 15/48 (31%), Positives = 25/48 (52%)
 Frame = -3

Query: 475 IGSPITLMMRPRVSAPTGIRIGEPESSTGCPRTKPSVPSMAMVRTVFS 332
           +G P   + RP    P+        S+TG  RT+P+VP+++  R + S
Sbjct: 284 LGIPAPAVPRPVAGKPST----RSASTTGAARTRPAVPAVSAPRALTS 327


>U42831-1|AAA83513.2|  614|Caenorhabditis elegans Hypothetical
           protein R11B5.1 protein.
          Length = 614

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 16/53 (30%)
 Frame = -2

Query: 614 FGIRSEQIDDFYTSYENLL------LHRHVDKL----------WSFSMNSSSL 504
           FG++  Q+ +++ +Y+  L      LH+H+DKL          W+F+M + SL
Sbjct: 433 FGLKQPQMTEYFIAYDRYLEQELPALHQHLDKLDVRPDLYLIEWTFAMYAKSL 485


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,960,766
Number of Sequences: 27780
Number of extensions: 315344
Number of successful extensions: 843
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 774
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 842
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)