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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0620
         (636 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g08690.1 68418.m01034 ATP synthase beta chain 2, mitochondria...   190   5e-49
At5g08680.1 68418.m01033 ATP synthase beta chain, mitochondrial,...   190   5e-49
At5g08670.1 68418.m01032 ATP synthase beta chain 1, mitochondria...   190   5e-49
At2g07698.1 68415.m00949 ATP synthase alpha chain, mitochondrial...    61   7e-10
At4g38510.2 68417.m05447 vacuolar ATP synthase subunit B, putati...    53   1e-07
At4g38510.1 68417.m05446 vacuolar ATP synthase subunit B, putati...    53   1e-07
At1g76030.1 68414.m08827 vacuolar ATP synthase subunit B / V-ATP...    53   2e-07
At1g20260.2 68414.m02530 vacuolar ATP synthase subunit B, putati...    53   2e-07
At1g20260.1 68414.m02529 vacuolar ATP synthase subunit B, putati...    53   2e-07
At5g18670.1 68418.m02216 beta-amylase, putative (BMY3) / 1,4-alp...    31   0.64 
At3g54040.1 68416.m05975 photoassimilate-responsive protein-rela...    31   0.64 
At2g33860.1 68415.m04157 auxin-responsive factor (ARF3) / ETTIN ...    30   1.5  
At4g34340.1 68417.m04880 expressed protein                             29   2.6  
At5g60450.1 68418.m07582 auxin-responsive factor (ARF4) contains...    27   7.9  
At3g62640.1 68416.m07036 expressed protein                             27   7.9  
At3g52640.1 68416.m05799 nicastrin-related contains weak similar...    27   7.9  
At2g33640.1 68415.m04124 zinc finger (DHHC type) family protein ...    27   7.9  
At1g28380.1 68414.m03487 expressed protein                             27   7.9  

>At5g08690.1 68418.m01034 ATP synthase beta chain 2, mitochondrial
           identical to SP|P83484 ATP synthase beta chain 2,
           mitochondrial precursor (EC 3.6.3.14) {Arabidopsis
           thaliana}; strong similarity to SP|P17614 ATP synthase
           beta chain, mitochondrial precursor (EC 3.6.3.14)
           {Nicotiana plumbaginifolia}; contains Pfam profiles
           PF00006: ATP synthase alpha/beta family
           nucleotide-binding domain, PF00306: ATP synthase ab C
           terminal, PF02874: ATP synthase alpha/beta family
           beta-barrel domain; supporting cDNA
           gi|26452187|dbj|AK118582.1|
          Length = 556

 Score =  190 bits (464), Expect = 5e-49
 Identities = 92/136 (67%), Positives = 110/136 (80%), Gaps = 2/136 (1%)
 Frame = +3

Query: 234 DVQFEDN--LPPILNALEVQNRSPRLVLEVAQHLGENTVRTIAMDGTEGLVRGQPVLDSG 407
           DV+FED   LPPI+ +LEVQ+   RLVLEV+ HLG+N VRTIAMDGTEGLVRG+ VL++G
Sbjct: 95  DVRFEDQEGLPPIMTSLEVQDHPTRLVLEVSHHLGQNVVRTIAMDGTEGLVRGRKVLNTG 154

Query: 408 SPIRIPVGAETLGRIINVIGEPIDERGPIPTDKTAAIHAEAPEFVDMSVQQEILVTGIKV 587
           +PI +PVG  TLGRI+NV+GEPIDERG I T+    IH +AP  VD++  QEIL TGIKV
Sbjct: 155 APITVPVGRATLGRIMNVLGEPIDERGEIKTEHYLPIHRDAPALVDLATGQEILATGIKV 214

Query: 588 VDLLAPYAKGGKIGLF 635
           VDLLAPY +GGKIGLF
Sbjct: 215 VDLLAPYQRGGKIGLF 230


>At5g08680.1 68418.m01033 ATP synthase beta chain, mitochondrial,
           putative strong similarity to SP|P83483 ATP synthase
           beta chain 1, mitochondrial precursor (EC 3.6.3.14)
           {Arabidopsis thaliana}, SP|P17614 ATP synthase beta
           chain, mitochondrial precursor (EC 3.6.3.14) {Nicotiana
           plumbaginifolia}; contains Pfam profiles PF00006: ATP
           synthase alpha/beta family nucleotide-binding domain,
           PF00306: ATP synthase ab C terminal, PF02874: ATP
           synthase alpha/beta family beta-barrel domain
          Length = 559

 Score =  190 bits (464), Expect = 5e-49
 Identities = 92/136 (67%), Positives = 110/136 (80%), Gaps = 2/136 (1%)
 Frame = +3

Query: 234 DVQFEDN--LPPILNALEVQNRSPRLVLEVAQHLGENTVRTIAMDGTEGLVRGQPVLDSG 407
           DV+FED   LPPI+ +LEVQ+   RLVLEV+ HLG+N VRTIAMDGTEGLVRG+ VL++G
Sbjct: 98  DVRFEDQEGLPPIMTSLEVQDHPTRLVLEVSHHLGQNVVRTIAMDGTEGLVRGRKVLNTG 157

Query: 408 SPIRIPVGAETLGRIINVIGEPIDERGPIPTDKTAAIHAEAPEFVDMSVQQEILVTGIKV 587
           +PI +PVG  TLGRI+NV+GEPIDERG I T+    IH +AP  VD++  QEIL TGIKV
Sbjct: 158 APITVPVGRATLGRIMNVLGEPIDERGEIKTEHYLPIHRDAPALVDLATGQEILATGIKV 217

Query: 588 VDLLAPYAKGGKIGLF 635
           VDLLAPY +GGKIGLF
Sbjct: 218 VDLLAPYQRGGKIGLF 233


>At5g08670.1 68418.m01032 ATP synthase beta chain 1, mitochondrial
           identical to SP|P83483 ATP synthase beta chain 1,
           mitochondrial precursor (EC 3.6.3.14) {Arabidopsis
           thaliana}; strong similarity to SP|P17614 ATP synthase
           beta chain, mitochondrial precursor (EC 3.6.3.14)
           {Nicotiana plumbaginifolia}; contains Pfam profiles
           PF00006: ATP synthase alpha/beta family
           nucleotide-binding domain, PF00306: ATP synthase ab C
           terminal, PF02874: ATP synthase alpha/beta family
           beta-barrel domain; supporting cDNA
           gi|26452102|dbj|AK118538.1|
          Length = 556

 Score =  190 bits (464), Expect = 5e-49
 Identities = 92/136 (67%), Positives = 110/136 (80%), Gaps = 2/136 (1%)
 Frame = +3

Query: 234 DVQFEDN--LPPILNALEVQNRSPRLVLEVAQHLGENTVRTIAMDGTEGLVRGQPVLDSG 407
           DV+FED   LPPI+ +LEVQ+   RLVLEV+ HLG+N VRTIAMDGTEGLVRG+ VL++G
Sbjct: 95  DVRFEDQEGLPPIMTSLEVQDHPTRLVLEVSHHLGQNVVRTIAMDGTEGLVRGRKVLNTG 154

Query: 408 SPIRIPVGAETLGRIINVIGEPIDERGPIPTDKTAAIHAEAPEFVDMSVQQEILVTGIKV 587
           +PI +PVG  TLGRI+NV+GEPIDERG I T+    IH +AP  VD++  QEIL TGIKV
Sbjct: 155 APITVPVGRATLGRIMNVLGEPIDERGEIKTEHYLPIHRDAPALVDLATGQEILATGIKV 214

Query: 588 VDLLAPYAKGGKIGLF 635
           VDLLAPY +GGKIGLF
Sbjct: 215 VDLLAPYQRGGKIGLF 230


>At2g07698.1 68415.m00949 ATP synthase alpha chain, mitochondrial,
           putative very strong similarity to SP|P23413 ATP
           synthase alpha chain, mitochondrial (EC 3.6.3.14)
           {Brassica campestris}; contains Pfam profiles PF00006:
           ATP synthase alpha/beta family nucleotide-binding
           domain, PF00306: ATP synthase ab C terminal, PF02874:
           ATP synthase alpha/beta family beta-barrel domain
          Length = 777

 Score = 60.9 bits (141), Expect = 7e-10
 Identities = 29/101 (28%), Positives = 50/101 (49%)
 Frame = +3

Query: 315 VAQHLGENTVRTIAMDGTEGLVRGQPVLDSGSPIRIPVGAETLGRIINVIGEPIDERGPI 494
           +A +L    V  +   G   +  G  V  +GS + +P G   LGR+++ +G PID +G +
Sbjct: 334 MALNLENENVGIVVFGGDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDAMGVPIDGKGAL 393

Query: 495 PTDKTAAIHAEAPEFVDMSVQQEILVTGIKVVDLLAPYAKG 617
              +   +  +AP  ++     E + TG+K VD L P  +G
Sbjct: 394 SDHEQRRVEVKAPGILERKSVHEPMQTGLKAVDSLVPIGRG 434


>At4g38510.2 68417.m05447 vacuolar ATP synthase subunit B, putative
           / V-ATPase B subunit, putative / vacuolar proton pump B
           subunit, putative / V-ATPase 57 kDa subunit, putative
           very strong similarity to SP|P11574 Vacuolar ATP
           synthase subunit B (EC 3.6.3.14) (V-ATPase B subunit)
           (Vacuolar proton pump B subunit) (V-ATPase 57 kDa
           subunit) {Arabidopsis thaliana}; contains Pfam profiles
           PF00006: ATP synthase alpha/beta family
           nucleotide-binding domain, PF00306: ATP synthase ab C
           terminal, PF02874: ATP synthase alpha/beta family
           beta-barrel domain
          Length = 487

 Score = 53.2 bits (122), Expect = 1e-07
 Identities = 32/103 (31%), Positives = 52/103 (50%), Gaps = 1/103 (0%)
 Frame = +3

Query: 330 GENTVRTIAMDGTEGLVRGQPVLD-SGSPIRIPVGAETLGRIINVIGEPIDERGPIPTDK 506
           GE  V  +  +GT G+      +  +G  ++ PV  + LGRI N  G+PID   PI  + 
Sbjct: 64  GEKAVVQV-FEGTSGIDNKYTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEA 122

Query: 507 TAAIHAEAPEFVDMSVQQEILVTGIKVVDLLAPYAKGGKIGLF 635
              I   +    + +  +E++ TGI  +D++   A+G KI LF
Sbjct: 123 YLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLF 165


>At4g38510.1 68417.m05446 vacuolar ATP synthase subunit B, putative
           / V-ATPase B subunit, putative / vacuolar proton pump B
           subunit, putative / V-ATPase 57 kDa subunit, putative
           very strong similarity to SP|P11574 Vacuolar ATP
           synthase subunit B (EC 3.6.3.14) (V-ATPase B subunit)
           (Vacuolar proton pump B subunit) (V-ATPase 57 kDa
           subunit) {Arabidopsis thaliana}; contains Pfam profiles
           PF00006: ATP synthase alpha/beta family
           nucleotide-binding domain, PF00306: ATP synthase ab C
           terminal, PF02874: ATP synthase alpha/beta family
           beta-barrel domain
          Length = 487

 Score = 53.2 bits (122), Expect = 1e-07
 Identities = 32/103 (31%), Positives = 52/103 (50%), Gaps = 1/103 (0%)
 Frame = +3

Query: 330 GENTVRTIAMDGTEGLVRGQPVLD-SGSPIRIPVGAETLGRIINVIGEPIDERGPIPTDK 506
           GE  V  +  +GT G+      +  +G  ++ PV  + LGRI N  G+PID   PI  + 
Sbjct: 64  GEKAVVQV-FEGTSGIDNKYTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEA 122

Query: 507 TAAIHAEAPEFVDMSVQQEILVTGIKVVDLLAPYAKGGKIGLF 635
              I   +    + +  +E++ TGI  +D++   A+G KI LF
Sbjct: 123 YLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLF 165


>At1g76030.1 68414.m08827 vacuolar ATP synthase subunit B / V-ATPase
           B subunit / vacuolar proton pump B subunit / V-ATPase 57
           kDa subunit identical to SP|P11574 Vacuolar ATP synthase
           subunit B (EC 3.6.3.14) (V-ATPase B subunit) (Vacuolar
           proton pump B subunit) (V-ATPase 57 kDa subunit)
           {Arabidopsis thaliana}
          Length = 486

 Score = 52.8 bits (121), Expect = 2e-07
 Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 1/103 (0%)
 Frame = +3

Query: 330 GENTVRTIAMDGTEGLV-RGQPVLDSGSPIRIPVGAETLGRIINVIGEPIDERGPIPTDK 506
           GE  V  +  +GT G+  +   V  +G  ++ PV  + LGRI N  G+PID   PI  + 
Sbjct: 63  GEKAVVQV-FEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEA 121

Query: 507 TAAIHAEAPEFVDMSVQQEILVTGIKVVDLLAPYAKGGKIGLF 635
              I   +    + +  +E++ TGI  +D++   A+G KI LF
Sbjct: 122 YLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLF 164


>At1g20260.2 68414.m02530 vacuolar ATP synthase subunit B, putative
           / V-ATPase B subunit, putative / vacuolar proton pump B
           subunit, putative / V-ATPase 57 kDa subunit, putative
           strong similarity to SP|P11574 Vacuolar ATP synthase
           subunit B (EC 3.6.3.14) (V-ATPase B subunit) (Vacuolar
           proton pump B subunit) (V-ATPase 57 kDa subunit)
           {Arabidopsis thaliana}; contains Pfam profiles PF00006:
           ATP synthase alpha/beta family nucleotide-binding
           domain, PF02874: ATP synthase alpha/beta family
           beta-barrel domain
          Length = 485

 Score = 52.8 bits (121), Expect = 2e-07
 Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 1/103 (0%)
 Frame = +3

Query: 330 GENTVRTIAMDGTEGLV-RGQPVLDSGSPIRIPVGAETLGRIINVIGEPIDERGPIPTDK 506
           GE  V  +  +GT G+  +   V  +G  ++ PV  + LGRI N  G+PID   PI  + 
Sbjct: 63  GEKAVVQV-FEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEA 121

Query: 507 TAAIHAEAPEFVDMSVQQEILVTGIKVVDLLAPYAKGGKIGLF 635
              I   +    + +  +E++ TGI  +D++   A+G KI LF
Sbjct: 122 YLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLF 164


>At1g20260.1 68414.m02529 vacuolar ATP synthase subunit B, putative
           / V-ATPase B subunit, putative / vacuolar proton pump B
           subunit, putative / V-ATPase 57 kDa subunit, putative
           strong similarity to SP|P11574 Vacuolar ATP synthase
           subunit B (EC 3.6.3.14) (V-ATPase B subunit) (Vacuolar
           proton pump B subunit) (V-ATPase 57 kDa subunit)
           {Arabidopsis thaliana}; contains Pfam profiles PF00006:
           ATP synthase alpha/beta family nucleotide-binding
           domain, PF02874: ATP synthase alpha/beta family
           beta-barrel domain
          Length = 330

 Score = 52.8 bits (121), Expect = 2e-07
 Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 1/103 (0%)
 Frame = +3

Query: 330 GENTVRTIAMDGTEGLV-RGQPVLDSGSPIRIPVGAETLGRIINVIGEPIDERGPIPTDK 506
           GE  V  +  +GT G+  +   V  +G  ++ PV  + LGRI N  G+PID   PI  + 
Sbjct: 63  GEKAVVQV-FEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEA 121

Query: 507 TAAIHAEAPEFVDMSVQQEILVTGIKVVDLLAPYAKGGKIGLF 635
              I   +    + +  +E++ TGI  +D++   A+G KI LF
Sbjct: 122 YLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLF 164


>At5g18670.1 68418.m02216 beta-amylase, putative (BMY3) /
           1,4-alpha-D-glucan maltohydrolase, putative almost
           identical to beta-amylase BMY3 GI:15149457 from
           [Arabidopsis thaliana]; identical to cDNA putative
           beta-amylase BMY3 (BMY3) GI:15149456
          Length = 536

 Score = 31.1 bits (67), Expect = 0.64
 Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
 Frame = -2

Query: 635 KQPNLSSF----GIRSEQIDDFYTSYENLLLHRHVDKLWSFSMNSSSLVG 498
           +QPN SSF    G    Q  DF+ S+ + LL  H D++ S + ++ S +G
Sbjct: 309 QQPNSSSFFSDGGSWESQYGDFFLSWYSSLLTSHADRVLSVASSAFSGIG 358


>At3g54040.1 68416.m05975 photoassimilate-responsive protein-related
           contains weak similarity to mRNA inducible by sucrose
           and salicylic acid expressed in sugar-accumulating
           tobacco plants (GI:871487) [Nicotiana tabacum]
          Length = 183

 Score = 31.1 bits (67), Expect = 0.64
 Identities = 17/44 (38%), Positives = 24/44 (54%)
 Frame = +3

Query: 249 DNLPPILNALEVQNRSPRLVLEVAQHLGENTVRTIAMDGTEGLV 380
           +NLP  + +  +     R +LE A   GE T RT A+D  EG+V
Sbjct: 29  ENLPTNMCSFSISASGKRCILETANVAGEFTCRTSAVD-VEGIV 71


>At2g33860.1 68415.m04157 auxin-responsive factor (ARF3) / ETTIN
           protein (ETT) identical to ETTIN GB:AF007788 from
           [Arabidopsis thaliana]
          Length = 608

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = -1

Query: 339 CSHPNVGLPQVRGGEIDFAPQGHLESEAGY-LRIAHLPQH 223
           C+ P + LP+ RG  + + PQGHLE    +   I  LP H
Sbjct: 59  CAGPLISLPK-RGSLVLYFPQGHLEQAPDFSAAIYGLPPH 97


>At4g34340.1 68417.m04880 expressed protein
          Length = 353

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = -2

Query: 494 DGTTLVNRFADYIDDATEGFSSHRDTNW 411
           DG +++  FA  ++ A +GFSS   T W
Sbjct: 259 DGLSVIEAFAPAMEAARDGFSSEAHTEW 286


>At5g60450.1 68418.m07582 auxin-responsive factor (ARF4) contains
           Pfam profile: PF02362 B3 DNA binding domain; identical
           to cDNA auxin response factor 4 (ARF4) GI:4102597
          Length = 788

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = -1

Query: 339 CSHPNVGLPQVRGGEIDFAPQGHLESEA 256
           C+ P   LP+ +G  + + PQGHLE +A
Sbjct: 70  CAGPLTCLPK-KGNVVVYFPQGHLEQDA 96


>At3g62640.1 68416.m07036 expressed protein
          Length = 110

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 16/65 (24%), Positives = 27/65 (41%)
 Frame = -3

Query: 439 VSAPTGIRIGEPESSTGCPRTKPSVPSMAMVRTVFSPKCWATSSTRRGDRFCTSRAFRIG 260
           V   T +    P+S    P   P   S +  RT  +P     + T+R  R  T + + + 
Sbjct: 27  VGGTTQVYSTRPDSPKFQPSIPPPPGSTSKTRTTATPWRLIDAETKRKKRIATYKTYALE 86

Query: 259 GRLSS 245
           G++ S
Sbjct: 87  GKVKS 91


>At3g52640.1 68416.m05799 nicastrin-related contains weak similarity
           to Nicastrin precursor (Swiss-Prot:Q92542) [Homo
           sapiens]
          Length = 676

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = -2

Query: 593 IDDFYTSYENLLLHRHVDKLWSFSMNSSSLV 501
           ++DF T++ N   H H+D L   ++NSSS+V
Sbjct: 421 LEDFDTNFVNKFYHSHLDDL--SNINSSSVV 449


>At2g33640.1 68415.m04124 zinc finger (DHHC type) family protein
           contains Pfam profile PF01529: DHHC zinc finger domain
          Length = 565

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = -1

Query: 447 DRGFQLP-PGYELVSQSLVRVAHGLSLQYRPWQWSELCSHPNVGLPQ 310
           D+  Q P P    V+ +  R + GLS+QYR    + LC+ PN+ + Q
Sbjct: 295 DQTSQYPSPASSAVTATSARSSLGLSIQYR---GASLCTPPNIFVDQ 338


>At1g28380.1 68414.m03487 expressed protein
          Length = 612

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
 Frame = -3

Query: 574 VTRISCCTDMSTN---SGASA*IAAVLSVGMGPRSSIGSP 464
           VTR SC  ++STN   SG  + I+  LS G+ P  +   P
Sbjct: 498 VTRKSCWDNLSTNSRKSGVFSMISTRLSTGLSPNPATTKP 537


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,377,130
Number of Sequences: 28952
Number of extensions: 300969
Number of successful extensions: 806
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 792
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 806
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1305036432
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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