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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0619
         (617 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0555 - 34693067-34693196,34693450-34693688,34693956-346940...    30   1.3  
10_01_0028 - 359988-359996,360228-360332,360415-360536,360676-36...    29   2.2  
12_01_0356 - 2707820-2708395,2708475-2708705,2709071-2709190,270...    29   3.0  
03_04_0092 + 17255548-17256046,17257838-17258262                       29   3.0  
05_06_0207 + 26377836-26378201,26379785-26379906,26380025-263802...    28   5.2  
04_03_0201 - 12586324-12587131,12590080-12591512                       28   5.2  
11_04_0423 - 17498569-17498932,17499217-17499992,17503439-17504617     28   6.8  
07_03_1214 + 24931142-24932314,24934177-24934434                       28   6.8  
08_01_0092 + 673271-673452,673546-673621,674043-674104,674504-67...    27   9.0  

>03_06_0555 -
           34693067-34693196,34693450-34693688,34693956-34694033,
           34694057-34694131,34694667-34694831,34695101-34695151,
           34695250-34695300,34695462-34695533,34695736-34695948,
           34696064-34696214,34696376-34696490,34696665-34696748,
           34696841-34696964,34697064-34697145,34697238-34697299,
           34697787-34697840,34697944-34698147
          Length = 649

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 26/101 (25%), Positives = 41/101 (40%), Gaps = 2/101 (1%)
 Frame = +2

Query: 44  LNDNLRKKVENILPRLFDNITDYFEGNDSAVCCLCHGDFRPNNIMMKEIDGEISETIPID 223
           L   L+ K + +   L   I +  EG    V CL HG  +    ++K + G I +    D
Sbjct: 324 LQKKLKAKKKRLTEPLLVRIMNTREGLKIGVSCLKHGSAKDRKKIIKSLKGHIMKLALSD 383

Query: 224 YQ--LIYYGCPIIDFLYFVFTATDKEFRRAHLTHLKTLYYD 340
           Y   L+     ++D    V     +E  +    HLK L +D
Sbjct: 384 YGCILLVAILSVVDDTKLVTKIVIQELAK----HLKQLIFD 420


>10_01_0028 -
           359988-359996,360228-360332,360415-360536,360676-360763,
           360988-361056,361132-361461,361544-361610,361695-361753,
           361838-362056,362224-362289,362370-362500,362683-362782,
           362864-363001,363111-363218,363627-363723,363806-364257
          Length = 719

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 5/61 (8%)
 Frame = +2

Query: 32  TLNFLNDNLRKKVENILPRLFDNITDYFEGNDSAVCCLCHGDFRP-----NNIMMKEIDG 196
           TL  L+D++  K E         IT++FEG D      C   FR      ++IMM+  D 
Sbjct: 172 TLYCLHDDVYVKAEEDKADYIGRITEFFEGTDHCHYFTCRWFFRAEDTVISSIMMENADD 231

Query: 197 E 199
           E
Sbjct: 232 E 232


>12_01_0356 -
           2707820-2708395,2708475-2708705,2709071-2709190,
           2709281-2709401,2711588-2712027
          Length = 495

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 17/45 (37%), Positives = 23/45 (51%)
 Frame = -3

Query: 597 NPHSMKSSTVPWILSLYLSCKVNDILPRSASVMSGTSFSSTNIKG 463
           +P S  SS+       YL+    D+LPR +S  SG+S  ST   G
Sbjct: 15  SPASRSSSSSSSSSLRYLATSDGDVLPRRSSSGSGSSLGSTGSLG 59


>03_04_0092 + 17255548-17256046,17257838-17258262
          Length = 307

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
 Frame = +2

Query: 65  KVENILPRLFDN-ITDYFEGNDSAVCCLCHGDFR-PNNIMMKEIDGEISETI 214
           KVE    R  D  +  Y +G D ++ C+CHG F  P   +     G++S  +
Sbjct: 243 KVEGPNGRKIDGFLYKYRKGEDVSIMCVCHGKFHSPAEFVKHAGGGDVSNPL 294


>05_06_0207 +
           26377836-26378201,26379785-26379906,26380025-26380220,
           26380642-26380759,26380869-26380916,26380995-26381095,
           26381178-26381285
          Length = 352

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 22/67 (32%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
 Frame = +2

Query: 146 CHGDFRPNNIMMKEIDGEISETIPIDYQLIYYGCPIIDFL-YFVFTATDKEFRRAHLTHL 322
           CH D +  NIM   ID E      IDY+   +G    D   +F   A D    + H+   
Sbjct: 207 CHNDLQYGNIM---IDEETKLLTIIDYEYASFGPVAYDIANHFCEMAADYHSEKPHILDY 263

Query: 323 KTLYYDT 343
            T Y DT
Sbjct: 264 -TKYPDT 269


>04_03_0201 - 12586324-12587131,12590080-12591512
          Length = 746

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = +2

Query: 140 CLCHGDFRPNNIMMKE 187
           C+ HGD +P+NIM+ E
Sbjct: 499 CVVHGDIKPSNIMLDE 514


>11_04_0423 - 17498569-17498932,17499217-17499992,17503439-17504617
          Length = 772

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = +2

Query: 206 ETIPIDYQLIYYGCPIIDFLYFVFTATDKEFRRAH 310
           ET+ + YQ++Y  CP I F +  FTA    F   H
Sbjct: 482 ETLKV-YQILYQACPYIKFAH--FTANQAIFEAFH 513


>07_03_1214 + 24931142-24932314,24934177-24934434
          Length = 476

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +2

Query: 413 DYKKKLDYGLIVTILYCPFMFVDENDVPDITEAD 514
           DY+ K+ +G+I T+ Y   M  DEN+ P+  + D
Sbjct: 138 DYRSKV-FGMIRTLKYLDKMDADENERPESDDDD 170


>08_01_0092 +
           673271-673452,673546-673621,674043-674104,674504-674606,
           674811-674852,674962-675123
          Length = 208

 Score = 27.5 bits (58), Expect = 9.0
 Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = +2

Query: 500 ITEADLGNISFTLHDKYKD-KIQGTVEDFIE 589
           + EAD+G I F+ H K  D    GT+E+ IE
Sbjct: 38  LCEADIGIIIFSAHGKLYDLATTGTMEELIE 68


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,450,059
Number of Sequences: 37544
Number of extensions: 249044
Number of successful extensions: 661
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 643
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 661
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1490248872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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