BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= an--0619 (617 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 03_06_0555 - 34693067-34693196,34693450-34693688,34693956-346940... 30 1.3 10_01_0028 - 359988-359996,360228-360332,360415-360536,360676-36... 29 2.2 12_01_0356 - 2707820-2708395,2708475-2708705,2709071-2709190,270... 29 3.0 03_04_0092 + 17255548-17256046,17257838-17258262 29 3.0 05_06_0207 + 26377836-26378201,26379785-26379906,26380025-263802... 28 5.2 04_03_0201 - 12586324-12587131,12590080-12591512 28 5.2 11_04_0423 - 17498569-17498932,17499217-17499992,17503439-17504617 28 6.8 07_03_1214 + 24931142-24932314,24934177-24934434 28 6.8 08_01_0092 + 673271-673452,673546-673621,674043-674104,674504-67... 27 9.0 >03_06_0555 - 34693067-34693196,34693450-34693688,34693956-34694033, 34694057-34694131,34694667-34694831,34695101-34695151, 34695250-34695300,34695462-34695533,34695736-34695948, 34696064-34696214,34696376-34696490,34696665-34696748, 34696841-34696964,34697064-34697145,34697238-34697299, 34697787-34697840,34697944-34698147 Length = 649 Score = 30.3 bits (65), Expect = 1.3 Identities = 26/101 (25%), Positives = 41/101 (40%), Gaps = 2/101 (1%) Frame = +2 Query: 44 LNDNLRKKVENILPRLFDNITDYFEGNDSAVCCLCHGDFRPNNIMMKEIDGEISETIPID 223 L L+ K + + L I + EG V CL HG + ++K + G I + D Sbjct: 324 LQKKLKAKKKRLTEPLLVRIMNTREGLKIGVSCLKHGSAKDRKKIIKSLKGHIMKLALSD 383 Query: 224 YQ--LIYYGCPIIDFLYFVFTATDKEFRRAHLTHLKTLYYD 340 Y L+ ++D V +E + HLK L +D Sbjct: 384 YGCILLVAILSVVDDTKLVTKIVIQELAK----HLKQLIFD 420 >10_01_0028 - 359988-359996,360228-360332,360415-360536,360676-360763, 360988-361056,361132-361461,361544-361610,361695-361753, 361838-362056,362224-362289,362370-362500,362683-362782, 362864-363001,363111-363218,363627-363723,363806-364257 Length = 719 Score = 29.5 bits (63), Expect = 2.2 Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 5/61 (8%) Frame = +2 Query: 32 TLNFLNDNLRKKVENILPRLFDNITDYFEGNDSAVCCLCHGDFRP-----NNIMMKEIDG 196 TL L+D++ K E IT++FEG D C FR ++IMM+ D Sbjct: 172 TLYCLHDDVYVKAEEDKADYIGRITEFFEGTDHCHYFTCRWFFRAEDTVISSIMMENADD 231 Query: 197 E 199 E Sbjct: 232 E 232 >12_01_0356 - 2707820-2708395,2708475-2708705,2709071-2709190, 2709281-2709401,2711588-2712027 Length = 495 Score = 29.1 bits (62), Expect = 3.0 Identities = 17/45 (37%), Positives = 23/45 (51%) Frame = -3 Query: 597 NPHSMKSSTVPWILSLYLSCKVNDILPRSASVMSGTSFSSTNIKG 463 +P S SS+ YL+ D+LPR +S SG+S ST G Sbjct: 15 SPASRSSSSSSSSSLRYLATSDGDVLPRRSSSGSGSSLGSTGSLG 59 >03_04_0092 + 17255548-17256046,17257838-17258262 Length = 307 Score = 29.1 bits (62), Expect = 3.0 Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 2/52 (3%) Frame = +2 Query: 65 KVENILPRLFDN-ITDYFEGNDSAVCCLCHGDFR-PNNIMMKEIDGEISETI 214 KVE R D + Y +G D ++ C+CHG F P + G++S + Sbjct: 243 KVEGPNGRKIDGFLYKYRKGEDVSIMCVCHGKFHSPAEFVKHAGGGDVSNPL 294 >05_06_0207 + 26377836-26378201,26379785-26379906,26380025-26380220, 26380642-26380759,26380869-26380916,26380995-26381095, 26381178-26381285 Length = 352 Score = 28.3 bits (60), Expect = 5.2 Identities = 22/67 (32%), Positives = 28/67 (41%), Gaps = 1/67 (1%) Frame = +2 Query: 146 CHGDFRPNNIMMKEIDGEISETIPIDYQLIYYGCPIIDFL-YFVFTATDKEFRRAHLTHL 322 CH D + NIM ID E IDY+ +G D +F A D + H+ Sbjct: 207 CHNDLQYGNIM---IDEETKLLTIIDYEYASFGPVAYDIANHFCEMAADYHSEKPHILDY 263 Query: 323 KTLYYDT 343 T Y DT Sbjct: 264 -TKYPDT 269 >04_03_0201 - 12586324-12587131,12590080-12591512 Length = 746 Score = 28.3 bits (60), Expect = 5.2 Identities = 9/16 (56%), Positives = 13/16 (81%) Frame = +2 Query: 140 CLCHGDFRPNNIMMKE 187 C+ HGD +P+NIM+ E Sbjct: 499 CVVHGDIKPSNIMLDE 514 >11_04_0423 - 17498569-17498932,17499217-17499992,17503439-17504617 Length = 772 Score = 27.9 bits (59), Expect = 6.8 Identities = 14/35 (40%), Positives = 19/35 (54%) Frame = +2 Query: 206 ETIPIDYQLIYYGCPIIDFLYFVFTATDKEFRRAH 310 ET+ + YQ++Y CP I F + FTA F H Sbjct: 482 ETLKV-YQILYQACPYIKFAH--FTANQAIFEAFH 513 >07_03_1214 + 24931142-24932314,24934177-24934434 Length = 476 Score = 27.9 bits (59), Expect = 6.8 Identities = 13/34 (38%), Positives = 21/34 (61%) Frame = +2 Query: 413 DYKKKLDYGLIVTILYCPFMFVDENDVPDITEAD 514 DY+ K+ +G+I T+ Y M DEN+ P+ + D Sbjct: 138 DYRSKV-FGMIRTLKYLDKMDADENERPESDDDD 170 >08_01_0092 + 673271-673452,673546-673621,674043-674104,674504-674606, 674811-674852,674962-675123 Length = 208 Score = 27.5 bits (58), Expect = 9.0 Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 1/31 (3%) Frame = +2 Query: 500 ITEADLGNISFTLHDKYKD-KIQGTVEDFIE 589 + EAD+G I F+ H K D GT+E+ IE Sbjct: 38 LCEADIGIIIFSAHGKLYDLATTGTMEELIE 68 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,450,059 Number of Sequences: 37544 Number of extensions: 249044 Number of successful extensions: 661 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 643 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 661 length of database: 14,793,348 effective HSP length: 79 effective length of database: 11,827,372 effective search space used: 1490248872 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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