BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0619
(617 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92827-2|CAB07327.2| 394|Caenorhabditis elegans Hypothetical pr... 45 4e-05
Z81592-6|CAB04733.2| 431|Caenorhabditis elegans Hypothetical pr... 45 4e-05
Z81592-5|CAB04727.1| 434|Caenorhabditis elegans Hypothetical pr... 45 4e-05
Z81592-4|CAB04728.1| 436|Caenorhabditis elegans Hypothetical pr... 44 1e-04
Z81592-7|CAB63314.1| 436|Caenorhabditis elegans Hypothetical pr... 43 2e-04
AF039044-13|AAG24128.2| 435|Caenorhabditis elegans Hypothetical... 42 5e-04
AF067943-8|AAO12414.1| 428|Caenorhabditis elegans Hypothetical ... 40 0.002
Z92827-1|CAB07326.1| 394|Caenorhabditis elegans Hypothetical pr... 39 0.002
Z81142-10|CAB03503.2| 384|Caenorhabditis elegans Hypothetical p... 38 0.004
AF067943-7|AAO12415.1| 420|Caenorhabditis elegans Hypothetical ... 38 0.004
U50301-2|AAM29675.1| 362|Caenorhabditis elegans Hypothetical pr... 38 0.006
AF099920-7|AAK29842.2| 336|Caenorhabditis elegans Hypothetical ... 37 0.013
AF099920-6|AAQ01531.1| 388|Caenorhabditis elegans Hypothetical ... 37 0.013
Z81592-3|CAB04729.2| 389|Caenorhabditis elegans Hypothetical pr... 36 0.031
U97002-9|AAB52261.2| 985|Caenorhabditis elegans Hypothetical pr... 33 0.22
U00065-10|AAA50733.2| 382|Caenorhabditis elegans Hypothetical p... 32 0.38
Z68227-15|CAJ80810.1| 414|Caenorhabditis elegans Hypothetical p... 31 0.50
Z68227-14|CAJ80809.1| 448|Caenorhabditis elegans Hypothetical p... 31 0.50
Z68227-13|CAA92511.1| 444|Caenorhabditis elegans Hypothetical p... 31 0.50
Z81088-9|CAB03126.1| 335|Caenorhabditis elegans Hypothetical pr... 30 1.5
AF016676-2|AAG24106.1| 500|Caenorhabditis elegans Cytochrome p4... 29 2.7
AF016438-14|AAB65888.1| 493|Caenorhabditis elegans Cytochrome p... 29 3.5
AF026209-6|AAB71281.1| 340|Caenorhabditis elegans Serpentine re... 28 4.6
Z81066-5|CAB02969.1| 777|Caenorhabditis elegans Hypothetical pr... 28 6.1
U42835-6|AAA83589.2| 816|Caenorhabditis elegans Dehydrogenases,... 28 6.1
>Z92827-2|CAB07327.2| 394|Caenorhabditis elegans Hypothetical
protein C29F7.2 protein.
Length = 394
Score = 45.2 bits (102), Expect = 4e-05
Identities = 34/125 (27%), Positives = 60/125 (48%), Gaps = 1/125 (0%)
Frame = +2
Query: 83 PRLFDNITD-YFEGNDSAVCCLCHGDFRPNNIMMKEIDGEISETIPIDYQLIYYGCPIID 259
P+ NI D Y E + + L HGD I+ + D +I+ I D+Q+ + G P+ D
Sbjct: 233 PKFLQNINDEYLE--ERRISVLTHGDLWAPQILWDKND-DIAGII--DWQITHRGSPMED 287
Query: 260 FLYFVFTATDKEFRRAHLTHLKTLYYDTMQNFLEYFDISIESVYSKTDFDNDYKKKLDYG 439
F + + T T E R+ L Y+D + + LE + + +++ + + +YK G
Sbjct: 288 FHHIMSTCTSVENRKNLTKPLLDYYFDKLSSGLEAKGVKMP--WTREEIEEEYKYSFING 345
Query: 440 LIVTI 454
+TI
Sbjct: 346 AALTI 350
>Z81592-6|CAB04733.2| 431|Caenorhabditis elegans Hypothetical
protein T16G1.6 protein.
Length = 431
Score = 45.2 bits (102), Expect = 4e-05
Identities = 34/109 (31%), Positives = 49/109 (44%), Gaps = 1/109 (0%)
Frame = +2
Query: 143 LCHGDFRPNNIMMKEIDGEISETIPIDYQLIYYGCPIIDFLYFVFTATDKEFRRAHLTHL 322
L HGD NI+ E DG+ S + IDYQ+I+ G P D + R+AH L
Sbjct: 273 LVHGDLWAANILWNENDGKFSASKVIDYQIIHMGNPAEDLVRVFLCTLSGADRQAHWEKL 332
Query: 323 KTLYYDTMQNFLEYFDISIESVYSKTDFDNDYKKKLDYGLIVTI-LYCP 466
+Y + FLE + + E Y+ Y+ G +V + LY P
Sbjct: 333 LEQFY---EYFLEALEDN-EIPYTLDQLKESYRLYFVTGSLVMLPLYGP 377
>Z81592-5|CAB04727.1| 434|Caenorhabditis elegans Hypothetical
protein T16G1.5 protein.
Length = 434
Score = 45.2 bits (102), Expect = 4e-05
Identities = 35/109 (32%), Positives = 49/109 (44%), Gaps = 1/109 (0%)
Frame = +2
Query: 143 LCHGDFRPNNIMMKEIDGEISETIPIDYQLIYYGCPIIDFLYFVFTATDKEFRRAHLTHL 322
L HGD NI+ KE DG + IDYQLI+ G P D + + R+AH L
Sbjct: 275 LVHGDLWAANILWKENDGNCVASKVIDYQLIHMGNPAEDLVRVFLSTLSGADRQAHWEKL 334
Query: 323 KTLYYDTMQNFLEYFDISIESVYSKTDFDNDYKKK-LDYGLIVTILYCP 466
+Y + FLE + E+ Y+ Y+ + GL V L+ P
Sbjct: 335 LEQFY---EYFLEALE-GNEAPYTLDQLKESYRLYFVGGGLFVMPLFGP 379
>Z81592-4|CAB04728.1| 436|Caenorhabditis elegans Hypothetical
protein T16G1.4 protein.
Length = 436
Score = 43.6 bits (98), Expect = 1e-04
Identities = 32/109 (29%), Positives = 51/109 (46%), Gaps = 1/109 (0%)
Frame = +2
Query: 143 LCHGDFRPNNIMMKEIDGEISETIPIDYQLIYYGCPIIDFLYFVFTATDKEFRRAHLTHL 322
L HGD NI+ +E +G+ + IDYQLI+ G P D + + R+AH L
Sbjct: 274 LVHGDLWSANILWEENEGKFLVSKVIDYQLIHMGNPAEDLVRLLLCTLSGADRQAHWERL 333
Query: 323 KTLYYDTMQNFLEYFDISIESVYSKTDFDNDYKKK-LDYGLIVTILYCP 466
+Y + FLE + E+ YS Y++ + GL + ++ P
Sbjct: 334 LEQFY---EYFLEALQDN-ETPYSLEQLKESYRQYFVTAGLFMLPMFGP 378
>Z81592-7|CAB63314.1| 436|Caenorhabditis elegans Hypothetical
protein T16G1.7 protein.
Length = 436
Score = 43.2 bits (97), Expect = 2e-04
Identities = 39/127 (30%), Positives = 55/127 (43%), Gaps = 5/127 (3%)
Frame = +2
Query: 143 LCHGDFRPNNIMMKEI-DGEISETIPIDYQLIYYGCPIIDFLYFVFTATDKEFRRAHLTH 319
L HGD NI+ KE DG+ S + IDYQLI+ G P D + + R+AH
Sbjct: 277 LVHGDLWAANILWKEENDGKFSVSKVIDYQLIHMGNPAEDLVRVFLSTLSGADRQAHWER 336
Query: 320 LKTLYYDTMQNFLEYFDISIESVYSKTDFDNDYK-KKLDYGLIVTILYCPFMFVD---EN 487
L +Y + FLE + YS Y+ + GL++ +Y P V N
Sbjct: 337 LLEQFY---EYFLEALG-DDKPPYSLEQLKESYRCYFVSGGLVMMPMYGPIAQVKLSYSN 392
Query: 488 DVPDITE 508
D + E
Sbjct: 393 DTESVEE 399
>AF039044-13|AAG24128.2| 435|Caenorhabditis elegans Hypothetical
protein F48G7.12 protein.
Length = 435
Score = 41.5 bits (93), Expect = 5e-04
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 5/114 (4%)
Frame = +2
Query: 143 LCHGDFRPNNIMMKEID-GEISETIPIDYQLIYYGCPIIDFLYFVFTATDKEFRRAHLTH 319
+ HGD NI+ KE D G S + IDYQLI+ G P D + + R+AH
Sbjct: 276 MVHGDLWAANILWKEKDEGTFSVSKVIDYQLIHMGNPAEDLVRLFLSTLSGADRQAHWER 335
Query: 320 LKTLYYDTMQNFLEYFDISI---ESVYSKTDFDNDYK-KKLDYGLIVTILYCPF 469
L ++ F YF ++ E+ YS Y+ + GL++ +Y PF
Sbjct: 336 L-------LEKFYTYFLAALGDDEAPYSLEQLKECYRCFFVSGGLVMMPMYGPF 382
>AF067943-8|AAO12414.1| 428|Caenorhabditis elegans Hypothetical
protein F59B1.10 protein.
Length = 428
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/72 (29%), Positives = 32/72 (44%)
Frame = +2
Query: 143 LCHGDFRPNNIMMKEIDGEISETIPIDYQLIYYGCPIIDFLYFVFTATDKEFRRAHLTHL 322
LCHGD N + E +G T +DYQ+ + G P D + + + R+AH +
Sbjct: 278 LCHGDLWAANFLWTENNGVFCATRIVDYQMSHLGNPAEDLVRLLVSTITGADRQAHWQQI 337
Query: 323 KTLYYDTMQNFL 358
+Y N L
Sbjct: 338 LEQFYSYFLNEL 349
>Z92827-1|CAB07326.1| 394|Caenorhabditis elegans Hypothetical
protein C29F7.1 protein.
Length = 394
Score = 39.1 bits (87), Expect = 0.002
Identities = 31/116 (26%), Positives = 53/116 (45%)
Frame = +2
Query: 107 DYFEGNDSAVCCLCHGDFRPNNIMMKEIDGEISETIPIDYQLIYYGCPIIDFLYFVFTAT 286
+Y EG +V L HGD I+ + D I+ I D+Q+ + G P+ D + T T
Sbjct: 242 EYLEGKRKSV--LTHGDLWSPQILWDK-DDNIAGII--DWQVGHQGSPMEDLHRILSTGT 296
Query: 287 DKEFRRAHLTHLKTLYYDTMQNFLEYFDISIESVYSKTDFDNDYKKKLDYGLIVTI 454
E R L Y++ + LE + ++ +++ + D +Y YG +TI
Sbjct: 297 SVENRNKLTKPLLDHYFEKLSAGLE--EKGVKMPWTREEVDEEYNHCFSYGASITI 350
>Z81142-10|CAB03503.2| 384|Caenorhabditis elegans Hypothetical
protein ZK1037.4 protein.
Length = 384
Score = 38.3 bits (85), Expect = 0.004
Identities = 32/132 (24%), Positives = 58/132 (43%), Gaps = 3/132 (2%)
Frame = +2
Query: 68 VENIL---PRLFDNITDYFEGNDSAVCCLCHGDFRPNNIMMKEIDGEISETIPIDYQLIY 238
VEN L P + D + N+ +CHGD I+ D E + +D+Q +
Sbjct: 215 VENTLDTDPNYLQKMRDEYI-NEERPSVICHGDLWAPQILW---DKEDNIAGIVDWQATH 270
Query: 239 YGCPIIDFLYFVFTATDKEFRRAHLTHLKTLYYDTMQNFLEYFDISIESVYSKTDFDNDY 418
G P+ D + + T T + R+ L YY+ ++ L+ + ++ +++ + D +Y
Sbjct: 271 RGSPMEDLHHILSTCTSVQNRKTFTKPLLDHYYNKLKVGLK--EKGFKTTWTREEIDIEY 328
Query: 419 KKKLDYGLIVTI 454
YG TI
Sbjct: 329 NYSFIYGASRTI 340
>AF067943-7|AAO12415.1| 420|Caenorhabditis elegans Hypothetical
protein F59B1.8 protein.
Length = 420
Score = 38.3 bits (85), Expect = 0.004
Identities = 18/65 (27%), Positives = 30/65 (46%)
Frame = +2
Query: 143 LCHGDFRPNNIMMKEIDGEISETIPIDYQLIYYGCPIIDFLYFVFTATDKEFRRAHLTHL 322
+CHGD NI+ + DG +DYQ + G P D + + + R++H H+
Sbjct: 270 ICHGDLWAANILWTQTDGGFIADKVLDYQESHMGNPAEDLVRLLVSTISGADRQSHWEHI 329
Query: 323 KTLYY 337
+Y
Sbjct: 330 LEQFY 334
>U50301-2|AAM29675.1| 362|Caenorhabditis elegans Hypothetical
protein F20D6.5 protein.
Length = 362
Score = 37.9 bits (84), Expect = 0.006
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = +2
Query: 143 LCHGDFRPNNIMM-KEIDGEISETIPIDYQLIYYGCPIIDFLYFVFTATDKEFRRAHLTH 319
LCHGD+ +N++ K DG +D+Q + +G D TA + RR
Sbjct: 231 LCHGDYSFHNLLYEKHCDGSYKFRAIVDFQSVNWGNAAQDLSRLFVTAMSGKDRRDSEDR 290
Query: 320 LKTLYYDTM 346
L +YYD +
Sbjct: 291 LLKIYYDEL 299
>AF099920-7|AAK29842.2| 336|Caenorhabditis elegans Hypothetical
protein H06H21.8a protein.
Length = 336
Score = 36.7 bits (81), Expect = 0.013
Identities = 16/68 (23%), Positives = 32/68 (47%)
Frame = +2
Query: 143 LCHGDFRPNNIMMKEIDGEISETIPIDYQLIYYGCPIIDFLYFVFTATDKEFRRAHLTHL 322
+CH D N++ K+ + + IDYQ+++ G D + + ++E RR +
Sbjct: 243 ICHADLNVTNVLWKKDSAKDEISAIIDYQMLFIGSIAFDIIRVLTLGLNREIRRKMTQNY 302
Query: 323 KTLYYDTM 346
Y+ T+
Sbjct: 303 LDHYHKTL 310
>AF099920-6|AAQ01531.1| 388|Caenorhabditis elegans Hypothetical
protein H06H21.8b protein.
Length = 388
Score = 36.7 bits (81), Expect = 0.013
Identities = 16/68 (23%), Positives = 32/68 (47%)
Frame = +2
Query: 143 LCHGDFRPNNIMMKEIDGEISETIPIDYQLIYYGCPIIDFLYFVFTATDKEFRRAHLTHL 322
+CH D N++ K+ + + IDYQ+++ G D + + ++E RR +
Sbjct: 243 ICHADLNVTNVLWKKDSAKDEISAIIDYQMLFIGSIAFDIIRVLTLGLNREIRRKMTQNY 302
Query: 323 KTLYYDTM 346
Y+ T+
Sbjct: 303 LDHYHKTL 310
>Z81592-3|CAB04729.2| 389|Caenorhabditis elegans Hypothetical
protein T16G1.3 protein.
Length = 389
Score = 35.5 bits (78), Expect = 0.031
Identities = 26/74 (35%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = +2
Query: 143 LCHGDFRPNNIMMKEIDGEISETIPIDYQLIYYGCPIIDFL-YFVFTATDKEFRRAHLTH 319
L HGD NIM KE E IDYQ I+ G P D + F+ T + E R+ +
Sbjct: 237 LVHGDLWSANIMWKENKDEFRVDKIIDYQSIHLGNPAEDLVRLFISTLSGSE-RQKYWEK 295
Query: 320 LKTLYYDTMQNFLE 361
L +Y+ LE
Sbjct: 296 LLEQFYEYFIEALE 309
>U97002-9|AAB52261.2| 985|Caenorhabditis elegans Hypothetical
protein K09H11.1 protein.
Length = 985
Score = 32.7 bits (71), Expect = 0.22
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +2
Query: 143 LCHGDFRPNNIMMKEIDGEISETIPIDYQLIYYGCPIIDFLYFVF 277
+ HGDFR +N++++E EI +D++L G P+ D F+F
Sbjct: 420 IVHGDFRVDNLIIEE--NEIKVKGVLDWELSTIGDPLSDLATFLF 462
>U00065-10|AAA50733.2| 382|Caenorhabditis elegans Hypothetical
protein D1044.1 protein.
Length = 382
Score = 31.9 bits (69), Expect = 0.38
Identities = 18/70 (25%), Positives = 30/70 (42%)
Frame = +2
Query: 143 LCHGDFRPNNIMMKEIDGEISETIPIDYQLIYYGCPIIDFLYFVFTATDKEFRRAHLTHL 322
+CH D +N++ G+I I D+Q + G D + + E RRA+
Sbjct: 245 ICHNDLNASNVLWNNETGKIQAFI--DFQHVSKGPVSFDIIRILCLGLSVENRRANTQRY 302
Query: 323 KTLYYDTMQN 352
YY T ++
Sbjct: 303 LNHYYTTFKS 312
>Z68227-15|CAJ80810.1| 414|Caenorhabditis elegans Hypothetical
protein F49C12.7c protein.
Length = 414
Score = 31.5 bits (68), Expect = 0.50
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = +2
Query: 149 HGDFRPNNIMMKEIDGEISETIPIDYQLIYYGCPIIDFLYFVFTATDKEFRRAHLTHLKT 328
HGD NIM + +G + + I D+Q+I++G D + T E R A+
Sbjct: 271 HGDLWSANIMWNQ-EGHLKKLI--DFQMIHFGLAATDLARVMNTCLSPEERHANKEKYLK 327
Query: 329 LYYDTM 346
Y+D +
Sbjct: 328 HYFDCL 333
>Z68227-14|CAJ80809.1| 448|Caenorhabditis elegans Hypothetical
protein F49C12.7b protein.
Length = 448
Score = 31.5 bits (68), Expect = 0.50
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = +2
Query: 149 HGDFRPNNIMMKEIDGEISETIPIDYQLIYYGCPIIDFLYFVFTATDKEFRRAHLTHLKT 328
HGD NIM + +G + + I D+Q+I++G D + T E R A+
Sbjct: 301 HGDLWSANIMWNQ-EGHLKKLI--DFQMIHFGLAATDLARVMNTCLSPEERHANKEKYLK 357
Query: 329 LYYDTM 346
Y+D +
Sbjct: 358 HYFDCL 363
>Z68227-13|CAA92511.1| 444|Caenorhabditis elegans Hypothetical
protein F49C12.7a protein.
Length = 444
Score = 31.5 bits (68), Expect = 0.50
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = +2
Query: 149 HGDFRPNNIMMKEIDGEISETIPIDYQLIYYGCPIIDFLYFVFTATDKEFRRAHLTHLKT 328
HGD NIM + +G + + I D+Q+I++G D + T E R A+
Sbjct: 301 HGDLWSANIMWNQ-EGHLKKLI--DFQMIHFGLAATDLARVMNTCLSPEERHANKEKYLK 357
Query: 329 LYYDTM 346
Y+D +
Sbjct: 358 HYFDCL 363
>Z81088-9|CAB03126.1| 335|Caenorhabditis elegans Hypothetical
protein F53F1.9 protein.
Length = 335
Score = 29.9 bits (64), Expect = 1.5
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +2
Query: 320 LKTLYYDTMQNFLEYF-DISIESVYSKTDFDNDYKKKLDYGLIVTILYCPFMFVDE 484
L L+ T+ F+ YF +I I Y KT F + + L G+IV I+ MF+ +
Sbjct: 16 LIVLFLFTIVTFILYFIEIQIVFSYRKTTFKGPFYRLLFVGIIVDIISVINMFMGQ 71
>AF016676-2|AAG24106.1| 500|Caenorhabditis elegans Cytochrome p450
family protein 33C3 protein.
Length = 500
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +2
Query: 320 LKTLYYDTMQNFLEYFDISIESVYSKTDFDNDYKKKLDY 436
L L + NF +FD IE+ K DFD+ ++ LDY
Sbjct: 230 LDVLLEEWRDNFYSFFDTQIENHRKKIDFDS--QESLDY 266
>AF016438-14|AAB65888.1| 493|Caenorhabditis elegans Cytochrome p450
family protein 33C4 protein.
Length = 493
Score = 28.7 bits (61), Expect = 3.5
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +2
Query: 320 LKTLYYDTMQNFLEYFDISIESVYSKTDFDNDYKKKLDY 436
L L + NF +FD IE+ K DFD+ ++ LDY
Sbjct: 230 LNELLEEWRDNFYTFFDTQIENHRKKIDFDS--QESLDY 266
>AF026209-6|AAB71281.1| 340|Caenorhabditis elegans Serpentine
receptor, class j protein24 protein.
Length = 340
Score = 28.3 bits (60), Expect = 4.6
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +2
Query: 419 KKKLDYGLIVTILYCPFMFV 478
K + YGL++TILYC F F+
Sbjct: 125 KHFVPYGLLITILYCLFHFM 144
>Z81066-5|CAB02969.1| 777|Caenorhabditis elegans Hypothetical
protein F17B5.1a protein.
Length = 777
Score = 27.9 bits (59), Expect = 6.1
Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 3/56 (5%)
Frame = +2
Query: 272 VFTATDKEFRRAHLTHLKTLYYDTMQ---NFLEYFDISIESVYSKTDFDNDYKKKL 430
VF KEF +HLT + L Q NF E DI +K + Y+ K+
Sbjct: 290 VFILEHKEFESSHLTMITELLGSIEQRFGNFTEMCDIMFTHFEAKAQMFDSYEAKM 345
>U42835-6|AAA83589.2| 816|Caenorhabditis elegans Dehydrogenases,
short chain protein27 protein.
Length = 816
Score = 27.9 bits (59), Expect = 6.1
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 5/74 (6%)
Frame = +2
Query: 143 LCHGDFRPNNIMM--KEIDGEISET---IPIDYQLIYYGCPIIDFLYFVFTATDKEFRRA 307
LCHGD N+M ++ E++ ID+Q ++ G DF + + D E RR
Sbjct: 326 LCHGDLWFYNLMWIPRKSGSEVASNHLGSIIDWQNVHTGNICEDFCHMLTFCCDTEIRRQ 385
Query: 308 HLTHLKTLYYDTMQ 349
YY+ ++
Sbjct: 386 AENTFLPYYYNQLK 399
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,806,956
Number of Sequences: 27780
Number of extensions: 263976
Number of successful extensions: 784
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 752
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 783
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1342816466
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -