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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0617
         (628 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0854 - 32267047-32267298,32267383-32268194,32268289-322684...    33   0.19 
02_05_0853 + 32261705-32261794,32261895-32262027,32262117-322629...    33   0.19 
01_01_0585 - 4328725-4329030,4329333-4329551,4329752-4329820,432...    31   0.99 
06_03_1380 + 29747187-29747267,29747349-29747481,29747758-297477...    29   3.0  
07_03_1756 - 29239137-29239325,29239741-29240259,29240693-292408...    29   4.0  
04_01_0097 - 998766-999383,999479-999861,1000021-1000398,1000486...    28   7.0  
09_04_0391 + 17248698-17248790,17248913-17249851,17249942-17250223     27   9.2  
06_03_1455 + 30264023-30264174,30265930-30266070,30266328-302664...    27   9.2  
03_02_0741 - 10857656-10857844,10858315-10858848,10859516-108598...    27   9.2  

>02_05_0854 -
           32267047-32267298,32267383-32268194,32268289-32268421,
           32268530-32268619
          Length = 428

 Score = 33.1 bits (72), Expect = 0.19
 Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 5/43 (11%)
 Frame = +3

Query: 255 QVDTNIIVSGETLELVDST----VFLGITVDSRLQWGPH-ICK 368
           QV  +I+++  T E  D      +F G T DSRL WGPH IC+
Sbjct: 108 QVIADIVINHRTAEHKDGRGIYCLFEGGTPDSRLDWGPHMICR 150


>02_05_0853 +
           32261705-32261794,32261895-32262027,32262117-32262928,
           32263020-32263271
          Length = 428

 Score = 33.1 bits (72), Expect = 0.19
 Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 5/43 (11%)
 Frame = +3

Query: 255 QVDTNIIVSGETLELVDST----VFLGITVDSRLQWGPH-ICK 368
           QV  +I+++  T E  D      +F G T DSRL WGPH IC+
Sbjct: 108 QVIADIVINHRTAEHKDGRGIYCLFEGGTPDSRLDWGPHMICR 150


>01_01_0585 -
           4328725-4329030,4329333-4329551,4329752-4329820,
           4329925-4331469,4332220-4332429,4332563-4332713,
           4332791-4333031,4333898-4333956,4334379-4334653,
           4334813-4334955,4335034-4335088,4335181-4335258,
           4335351-4335478,4335533-4335575
          Length = 1173

 Score = 30.7 bits (66), Expect = 0.99
 Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
 Frame = -1

Query: 421 YVRIFFTANAAELSLFANLHM*GPHCSLEST---VIPRKTVESTSSSVSPLTMILVSTCL 251
           YV     A + EL LF  +   G H +L+ +   VIP KT   ++   + ++  ++ T  
Sbjct: 686 YVLAAVCALSCELQLFPFISKNGNHSNLKDSIKIVIPGKTTGISNELHNSISSAILHTRR 745

Query: 250 TLGVVKAQ*PSRLEAVGRQKKYRDN 176
            LG+++A    +  +VG    Y  N
Sbjct: 746 ILGILEALFSLKPSSVGTSWSYSSN 770


>06_03_1380 +
           29747187-29747267,29747349-29747481,29747758-29747770,
           29748027-29748118,29749011-29749831,29750375-29750677
          Length = 480

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 12/20 (60%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
 Frame = +3

Query: 312 VFLGITVDSRLQWGPH-ICK 368
           +F G T D RL WGPH IC+
Sbjct: 163 IFEGGTPDGRLDWGPHMICR 182


>07_03_1756 -
           29239137-29239325,29239741-29240259,29240693-29240800,
           29240856-29241155,29241730-29241831,29243042-29243209,
           29243878-29243991,29244184-29244288,29244372-29244502,
           29244794-29244918,29245001-29245172,29245277-29245316,
           29245636-29245722,29245803-29245868,29246412-29246510,
           29246714-29246836,29247066-29247107,29247195-29247260,
           29247362-29247553,29247672-29247737,29248839-29249141
          Length = 1038

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 13/37 (35%), Positives = 26/37 (70%), Gaps = 3/37 (8%)
 Frame = +1

Query: 175 YYLDIFFAYPQLL---TSKVIELLPHPMLDK*TLISL 276
           +YLD+     ++L   T+ VIE++P+P+LD+  +I++
Sbjct: 567 HYLDVPIDLSKVLFVCTANVIEMIPNPLLDRMEIIAI 603


>04_01_0097 -
           998766-999383,999479-999861,1000021-1000398,
           1000486-1000711,1000799-1001323,1003032-1003164,
           1004353-1004435,1004645-1005349,1005483-1005556,
           1006290-1006392,1006485-1006727
          Length = 1156

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 18/62 (29%), Positives = 25/62 (40%), Gaps = 1/62 (1%)
 Frame = +3

Query: 366 KLANRLSSAAFAVKKIRTYTDEDTAR-LVYFSYFHSVMSYGILLWGNAADVETIFILQKR 542
           +L +RL +    V       +E  A  L      HSV S G L W +   V   F +  R
Sbjct: 530 RLCSRLKNKGLLVDTFHVSVEEQVAMFLKKVGQHHSVPSVGFLFWRSGETVSRYFHIVLR 589

Query: 543 AI 548
           A+
Sbjct: 590 AM 591


>09_04_0391 + 17248698-17248790,17248913-17249851,17249942-17250223
          Length = 437

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 5/50 (10%)
 Frame = +3

Query: 231 AFTTPNVRQVDTNIIVSGETLELVDST----VFLGITVDSRLQWGPH-IC 365
           AF + +++ V  +I+++    +  DS     +F G T DSRL WGP  IC
Sbjct: 102 AFHSKSIKCV-ADIVINHRCADYKDSRGIYCIFEGGTPDSRLDWGPDMIC 150


>06_03_1455 +
           30264023-30264174,30265930-30266070,30266328-30266430,
           30266510-30266659,30267184-30267229,30267383-30267738
          Length = 315

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = -1

Query: 187 YRDNIKDYLVHYLASHYFGGRGGCAY 110
           YRD  +DY  H  A  Y+ GRGG  Y
Sbjct: 247 YRDT-RDYSPHRDARDYYDGRGGRGY 271


>03_02_0741 -
           10857656-10857844,10858315-10858848,10859516-10859824,
           10860521-10860622,10861446-10861613,10862734-10862847,
           10863003-10863107,10863206-10863336,10863680-10863804,
           10863890-10864061,10864411-10864505,10864771-10864841,
           10864923-10865009,10865119-10865184,10865401-10865499,
           10866631-10866672,10866757-10866822,10866910-10867101,
           10867224-10867289,10868473-10868811
          Length = 1023

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 13/37 (35%), Positives = 25/37 (67%), Gaps = 3/37 (8%)
 Frame = +1

Query: 175 YYLDIFFAYPQLL---TSKVIELLPHPMLDK*TLISL 276
           +YLD+     ++L   T+ VIE++P P+LD+  +I++
Sbjct: 580 HYLDVPIDLSKVLFVCTANVIEMIPGPLLDRMEIITI 616


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,849,496
Number of Sequences: 37544
Number of extensions: 293763
Number of successful extensions: 656
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 655
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1525730988
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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