BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= an--0617 (628 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 02_05_0854 - 32267047-32267298,32267383-32268194,32268289-322684... 33 0.19 02_05_0853 + 32261705-32261794,32261895-32262027,32262117-322629... 33 0.19 01_01_0585 - 4328725-4329030,4329333-4329551,4329752-4329820,432... 31 0.99 06_03_1380 + 29747187-29747267,29747349-29747481,29747758-297477... 29 3.0 07_03_1756 - 29239137-29239325,29239741-29240259,29240693-292408... 29 4.0 04_01_0097 - 998766-999383,999479-999861,1000021-1000398,1000486... 28 7.0 09_04_0391 + 17248698-17248790,17248913-17249851,17249942-17250223 27 9.2 06_03_1455 + 30264023-30264174,30265930-30266070,30266328-302664... 27 9.2 03_02_0741 - 10857656-10857844,10858315-10858848,10859516-108598... 27 9.2 >02_05_0854 - 32267047-32267298,32267383-32268194,32268289-32268421, 32268530-32268619 Length = 428 Score = 33.1 bits (72), Expect = 0.19 Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 5/43 (11%) Frame = +3 Query: 255 QVDTNIIVSGETLELVDST----VFLGITVDSRLQWGPH-ICK 368 QV +I+++ T E D +F G T DSRL WGPH IC+ Sbjct: 108 QVIADIVINHRTAEHKDGRGIYCLFEGGTPDSRLDWGPHMICR 150 >02_05_0853 + 32261705-32261794,32261895-32262027,32262117-32262928, 32263020-32263271 Length = 428 Score = 33.1 bits (72), Expect = 0.19 Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 5/43 (11%) Frame = +3 Query: 255 QVDTNIIVSGETLELVDST----VFLGITVDSRLQWGPH-ICK 368 QV +I+++ T E D +F G T DSRL WGPH IC+ Sbjct: 108 QVIADIVINHRTAEHKDGRGIYCLFEGGTPDSRLDWGPHMICR 150 >01_01_0585 - 4328725-4329030,4329333-4329551,4329752-4329820, 4329925-4331469,4332220-4332429,4332563-4332713, 4332791-4333031,4333898-4333956,4334379-4334653, 4334813-4334955,4335034-4335088,4335181-4335258, 4335351-4335478,4335533-4335575 Length = 1173 Score = 30.7 bits (66), Expect = 0.99 Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 3/85 (3%) Frame = -1 Query: 421 YVRIFFTANAAELSLFANLHM*GPHCSLEST---VIPRKTVESTSSSVSPLTMILVSTCL 251 YV A + EL LF + G H +L+ + VIP KT ++ + ++ ++ T Sbjct: 686 YVLAAVCALSCELQLFPFISKNGNHSNLKDSIKIVIPGKTTGISNELHNSISSAILHTRR 745 Query: 250 TLGVVKAQ*PSRLEAVGRQKKYRDN 176 LG+++A + +VG Y N Sbjct: 746 ILGILEALFSLKPSSVGTSWSYSSN 770 >06_03_1380 + 29747187-29747267,29747349-29747481,29747758-29747770, 29748027-29748118,29749011-29749831,29750375-29750677 Length = 480 Score = 29.1 bits (62), Expect = 3.0 Identities = 12/20 (60%), Positives = 14/20 (70%), Gaps = 1/20 (5%) Frame = +3 Query: 312 VFLGITVDSRLQWGPH-ICK 368 +F G T D RL WGPH IC+ Sbjct: 163 IFEGGTPDGRLDWGPHMICR 182 >07_03_1756 - 29239137-29239325,29239741-29240259,29240693-29240800, 29240856-29241155,29241730-29241831,29243042-29243209, 29243878-29243991,29244184-29244288,29244372-29244502, 29244794-29244918,29245001-29245172,29245277-29245316, 29245636-29245722,29245803-29245868,29246412-29246510, 29246714-29246836,29247066-29247107,29247195-29247260, 29247362-29247553,29247672-29247737,29248839-29249141 Length = 1038 Score = 28.7 bits (61), Expect = 4.0 Identities = 13/37 (35%), Positives = 26/37 (70%), Gaps = 3/37 (8%) Frame = +1 Query: 175 YYLDIFFAYPQLL---TSKVIELLPHPMLDK*TLISL 276 +YLD+ ++L T+ VIE++P+P+LD+ +I++ Sbjct: 567 HYLDVPIDLSKVLFVCTANVIEMIPNPLLDRMEIIAI 603 >04_01_0097 - 998766-999383,999479-999861,1000021-1000398, 1000486-1000711,1000799-1001323,1003032-1003164, 1004353-1004435,1004645-1005349,1005483-1005556, 1006290-1006392,1006485-1006727 Length = 1156 Score = 27.9 bits (59), Expect = 7.0 Identities = 18/62 (29%), Positives = 25/62 (40%), Gaps = 1/62 (1%) Frame = +3 Query: 366 KLANRLSSAAFAVKKIRTYTDEDTAR-LVYFSYFHSVMSYGILLWGNAADVETIFILQKR 542 +L +RL + V +E A L HSV S G L W + V F + R Sbjct: 530 RLCSRLKNKGLLVDTFHVSVEEQVAMFLKKVGQHHSVPSVGFLFWRSGETVSRYFHIVLR 589 Query: 543 AI 548 A+ Sbjct: 590 AM 591 >09_04_0391 + 17248698-17248790,17248913-17249851,17249942-17250223 Length = 437 Score = 27.5 bits (58), Expect = 9.2 Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 5/50 (10%) Frame = +3 Query: 231 AFTTPNVRQVDTNIIVSGETLELVDST----VFLGITVDSRLQWGPH-IC 365 AF + +++ V +I+++ + DS +F G T DSRL WGP IC Sbjct: 102 AFHSKSIKCV-ADIVINHRCADYKDSRGIYCIFEGGTPDSRLDWGPDMIC 150 >06_03_1455 + 30264023-30264174,30265930-30266070,30266328-30266430, 30266510-30266659,30267184-30267229,30267383-30267738 Length = 315 Score = 27.5 bits (58), Expect = 9.2 Identities = 13/26 (50%), Positives = 15/26 (57%) Frame = -1 Query: 187 YRDNIKDYLVHYLASHYFGGRGGCAY 110 YRD +DY H A Y+ GRGG Y Sbjct: 247 YRDT-RDYSPHRDARDYYDGRGGRGY 271 >03_02_0741 - 10857656-10857844,10858315-10858848,10859516-10859824, 10860521-10860622,10861446-10861613,10862734-10862847, 10863003-10863107,10863206-10863336,10863680-10863804, 10863890-10864061,10864411-10864505,10864771-10864841, 10864923-10865009,10865119-10865184,10865401-10865499, 10866631-10866672,10866757-10866822,10866910-10867101, 10867224-10867289,10868473-10868811 Length = 1023 Score = 27.5 bits (58), Expect = 9.2 Identities = 13/37 (35%), Positives = 25/37 (67%), Gaps = 3/37 (8%) Frame = +1 Query: 175 YYLDIFFAYPQLL---TSKVIELLPHPMLDK*TLISL 276 +YLD+ ++L T+ VIE++P P+LD+ +I++ Sbjct: 580 HYLDVPIDLSKVLFVCTANVIEMIPGPLLDRMEIITI 616 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,849,496 Number of Sequences: 37544 Number of extensions: 293763 Number of successful extensions: 656 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 646 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 655 length of database: 14,793,348 effective HSP length: 79 effective length of database: 11,827,372 effective search space used: 1525730988 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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