Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0617
(628 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 37 6e-04
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript... 35 0.002
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 35 0.002
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript... 33 0.006
M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles ... 32 0.013
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript... 32 0.013
AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcript... 32 0.013
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript... 32 0.017
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript... 31 0.030
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 30 0.052
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 30 0.069
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript... 29 0.12
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript... 29 0.12
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein. 24 4.5
AF364132-1|AAL35508.1| 397|Anopheles gambiae putative odorant r... 23 6.0
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 36.7 bits (81), Expect = 6e-04
Identities = 18/69 (26%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = +3
Query: 315 FLGITVDSRLQWGPHICKLANRLSSAAFAVKKI-RTYTDEDTARLVYFSYF-HSVMSYGI 488
+LG+ + L+W H+ K++ + S AV ++ + ++ TA+ +Y SV+ Y
Sbjct: 792 YLGVQLQDHLKWRDHVTKVSEKASRVVAAVTRLMQNHSGPRTAKSRLLAYVAESVLRYAA 851
Query: 489 LLWGNAADV 515
+W A V
Sbjct: 852 PVWAEATQV 860
>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
protein.
Length = 1099
Score = 35.1 bits (77), Expect = 0.002
Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = +3
Query: 315 FLGITVDSRLQWGPHICKLANRLSSAAFAVKK-IRTYTDEDTARL-VYFSYFHSVMSYGI 488
+LG+T+ +L W PH+ ++ R A A + +R +++ ++ + S SVM Y
Sbjct: 732 YLGVTLQDKLSWLPHVKEVTERAGKIADATSRLLRNHSEPRASKAKLLASVSESVMRYAA 791
Query: 489 LLW 497
+W
Sbjct: 792 PVW 794
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 34.7 bits (76), Expect = 0.002
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = +3
Query: 315 FLGITVDSRLQWGPHICKLANRLSSAAFAVKK-IRTYTDEDTARL-VYFSYFHSVMSYGI 488
+LG+T+ L W PH+ ++ R A AV + +R ++ T++ + S SV+ Y
Sbjct: 799 YLGVTLHDHLSWLPHVREVTTRARKIADAVTRLLRNHSGPKTSKARLLASVAESVIRYAA 858
Query: 489 LLW 497
+W
Sbjct: 859 PIW 861
>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
protein.
Length = 1168
Score = 33.5 bits (73), Expect = 0.006
Identities = 22/91 (24%), Positives = 43/91 (47%), Gaps = 2/91 (2%)
Frame = +3
Query: 252 RQVDTNIIVSGETLELVDSTVFLGITVDSRLQWGPHICKLANRLSSAAFAVKKI-RTYTD 428
R + NI G + S +LG+ + L W PH+ +A++ A++ I R ++
Sbjct: 723 RNIPVNIC--GVEVRSKRSIRYLGVMLHDHLSWRPHVEMVADKALRVVRALRGIMRNHSG 780
Query: 429 EDTA-RLVYFSYFHSVMSYGILLWGNAADVE 518
+ R + + S++ YG +W A D++
Sbjct: 781 PQVSKRKLLAAVAASIIRYGAPVWTEATDLQ 811
>M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles
gambiae T1 retroposon. ).
Length = 975
Score = 32.3 bits (70), Expect = 0.013
Identities = 21/83 (25%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Frame = +3
Query: 258 VDTNIIVSGETLELVDSTVFLGITVDSRLQWGPHICKL---ANRLSSAAFAVKKIRTYTD 428
+ N +S +L V S LGI +DSRL + + ++ ANR + F ++ + D
Sbjct: 756 ISFNYTLSNSSLSRVLSIRDLGIILDSRLNFKLQLDEVLLKANR--TLGFILRFTSIFRD 813
Query: 429 EDTARLVYFSYFHSVMSYGILLW 497
+ R +Y++ ++ Y ++W
Sbjct: 814 QSFLRNLYYALVRPLLEYASIIW 836
>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
protein.
Length = 1022
Score = 32.3 bits (70), Expect = 0.013
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +3
Query: 261 DTNIIVSGETLELVDSTVFLGITVDSRLQWGPHICKLANR 380
++ IIV G T+ +LGI +D RL++ HI +A R
Sbjct: 698 ESQIIVEGHTIRSSRHLKYLGIMIDDRLEYTQHIKYVAER 737
>AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcriptase
protein.
Length = 988
Score = 32.3 bits (70), Expect = 0.013
Identities = 24/111 (21%), Positives = 50/111 (45%), Gaps = 3/111 (2%)
Frame = +3
Query: 198 LPTASNLEGY*AFTTPNVRQVDTNIIVSGETLELVDSTVFLGITVDSRLQWGPHICKLAN 377
L A G+ F T +V Q+ + G +++ ++ +LG+ + + H+ ++AN
Sbjct: 690 LELAHQKTGFMIFCTHHVPQL-AELQAGGHSIQSTETLKYLGVDLCRKQHHSRHLERVAN 748
Query: 378 RLSSAAFAVKKI--RTYTDEDTARLVYFSYFHSVMSYGILLWGN-AADVET 521
+ S A+ + + +R + +S++ YG+ WG D ET
Sbjct: 749 KASRITNALTCLMPNKRGPKSRSRRQLINVGNSIIRYGVATWGRWVLDKET 799
>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
protein.
Length = 1222
Score = 31.9 bits (69), Expect = 0.017
Identities = 16/70 (22%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Frame = +3
Query: 315 FLGITVDSRLQWGPHI-CKLANRLSSAAFAVKKIRTYTDEDTA-RLVYFSYFHSVMSYGI 488
+LG+ + L W PH+ A L +R ++ A R + + S++ Y
Sbjct: 739 YLGVQIHDHLSWKPHVELSTAKALRVVGVVTAVMRNHSGPQVAKRRLLAAVAESIIRYAA 798
Query: 489 LLWGNAADVE 518
+W A D++
Sbjct: 799 PVWSEATDLQ 808
>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 31.1 bits (67), Expect = 0.030
Identities = 18/85 (21%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Frame = +3
Query: 258 VDTNIIVSGETLELVDSTVFLGITVDSRLQWGPHICKLANRLSSAAFAVK-KIRTYTDED 434
++ ++++G S +LG+ +D++L W H+ + A A+ +R ++
Sbjct: 734 INVPVVINGVERRTTRSIRYLGVVIDNQLSWKSHVEYCTTKALRTAKALGCLMRNHSGPK 793
Query: 435 TA-RLVYFSYFHSVMSYGILLWGNA 506
A R + S S++ Y +W A
Sbjct: 794 CAKRRLLASVVDSILRYAAPVWHEA 818
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 30.3 bits (65), Expect = 0.052
Identities = 17/83 (20%), Positives = 33/83 (39%), Gaps = 2/83 (2%)
Frame = +3
Query: 270 IIVSGETLELVDSTVFLGITVDSRLQWGPHICKLANRLSSAAFAVKKI-RTYTDEDTA-R 443
I V G + + +LG+ + W PH+ + + V + R ++ A R
Sbjct: 721 IRVGGLEIRSKQAIRYLGVMIHDHFLWRPHVTMAVEKANRVVKVVTNVMRNHSGPRVAKR 780
Query: 444 LVYFSYFHSVMSYGILLWGNAAD 512
+ +++ YG +W A D
Sbjct: 781 RLLAGVSEAIIRYGAPIWAEATD 803
>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
protein.
Length = 1154
Score = 29.9 bits (64), Expect = 0.069
Identities = 23/99 (23%), Positives = 39/99 (39%), Gaps = 2/99 (2%)
Frame = +3
Query: 261 DTNIIVSGETLELVDSTVFLGITVDSRLQWGPHICKLANRLSSAAFAVKKIR-TYTDEDT 437
D I V G + + +LG+ + L W PH+ + + + AV ++ + T
Sbjct: 729 DITITVGGTEVPFSRTLKYLGVRLHYNLSWVPHVKAVIQKATQIVQAVTQLMPNHRGPKT 788
Query: 438 ARL-VYFSYFHSVMSYGILLWGNAADVETIFILQKRAIR 551
+R + + S M Y +W A L KR R
Sbjct: 789 SRCRLLAAVADSTMRYAAPVWHGALTNRECRSLLKRVQR 827
>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
protein.
Length = 1201
Score = 29.1 bits (62), Expect = 0.12
Identities = 20/96 (20%), Positives = 38/96 (39%), Gaps = 2/96 (2%)
Frame = +3
Query: 270 IIVSGETLELVDSTVFLGITVDSRLQWGPHICKLANRLSSAAFAVKKI--RTYTDEDTAR 443
I G + S +LG+ V + L W PH+ ++ + + AV ++ + +
Sbjct: 793 ITFGGVNVPFSRSIKYLGVRVHAHLSWVPHVKEITLKATRIVHAVNRLMPNLHGPRTSMS 852
Query: 444 LVYFSYFHSVMSYGILLWGNAADVETIFILQKRAIR 551
+ + S M Y +W A + L +R R
Sbjct: 853 RLLANVADSTMRYAAPVWHEAIGNQECCRLLRRVQR 888
>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 29.1 bits (62), Expect = 0.12
Identities = 26/98 (26%), Positives = 39/98 (39%), Gaps = 3/98 (3%)
Frame = +3
Query: 267 NIIVSGETLELVDSTVFLGITVDSRLQWGPHICKLANRLSSAAFAVKKI---RTYTDEDT 437
+I V G + S LG+ V L W PH+ + R A AV ++
Sbjct: 736 SIDVRGTAVPYSRSIKHLGVLVHDHLSWIPHVTAVTQRAVQIAQAVGRLMPNHRGPKMSK 795
Query: 438 ARLVYFSYFHSVMSYGILLWGNAADVETIFILQKRAIR 551
+RL+ + SVM Y +W A + L +R R
Sbjct: 796 SRLL-AAVADSVMRYAAPVWHEALNTRECRRLLERVQR 832
>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
Length = 1664
Score = 23.8 bits (49), Expect = 4.5
Identities = 10/28 (35%), Positives = 18/28 (64%), Gaps = 3/28 (10%)
Frame = -1
Query: 556 IARIALFCRMKI---VSTSAALPHSKMP 482
+A + LFCR+K+ +++ A LP +P
Sbjct: 346 VASLQLFCRLKVQTSLASEALLPRLPLP 373
>AF364132-1|AAL35508.1| 397|Anopheles gambiae putative odorant
receptor Or4 protein.
Length = 397
Score = 23.4 bits (48), Expect = 6.0
Identities = 10/41 (24%), Positives = 20/41 (48%)
Frame = -3
Query: 335 INCYTKKNCRINKLQCLSTYNDISVYLSNIGCGKSSITFEV 213
+N + + L C+ ++ +YL+N+G S+T V
Sbjct: 262 LNTSIRSMLMLQWLTCVLNWSISLIYLTNVGISLQSVTVVV 302
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 608,025
Number of Sequences: 2352
Number of extensions: 12712
Number of successful extensions: 61
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 61
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61050630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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