Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0617
(628 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81113-6|CAD21647.2| 295|Caenorhabditis elegans Hypothetical pr... 29 2.1
U56961-3|AAK39294.1| 634|Caenorhabditis elegans Hypothetical pr... 28 4.8
U28941-4|AAM98024.1| 484|Caenorhabditis elegans Temporarily ass... 28 6.3
U28941-3|AAM98025.1| 799|Caenorhabditis elegans Temporarily ass... 28 6.3
U28941-2|AAC71103.1| 1091|Caenorhabditis elegans Temporarily ass... 28 6.3
U28941-1|AAC71102.1| 1107|Caenorhabditis elegans Temporarily ass... 28 6.3
Z81538-1|CAB04383.1| 569|Caenorhabditis elegans Hypothetical pr... 27 8.3
AF000196-9|AAO61448.1| 395|Caenorhabditis elegans Hypothetical ... 27 8.3
AF000196-8|AAL11096.1| 624|Caenorhabditis elegans Hypothetical ... 27 8.3
AF000196-7|AAC24251.2| 706|Caenorhabditis elegans Hypothetical ... 27 8.3
>Z81113-6|CAD21647.2| 295|Caenorhabditis elegans Hypothetical
protein T03F6.6 protein.
Length = 295
Score = 29.5 bits (63), Expect = 2.1
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 12/80 (15%)
Frame = +3
Query: 360 ICKLANRLSSAAFAVKKIRTY-TDEDTARLVYFSYF----------HSVMSYGILLW-GN 503
+C L A +VK IRT TD+DT L+Y++ F S+MSY + W
Sbjct: 80 VCNLIGVAYPAYVSVKAIRTEGTDDDTMWLIYWTVFGAFSIIDFFAASIMSYFPIYWVAK 139
Query: 504 AADVETIFILQKRAIRAIYN 563
AA + +++ + IY+
Sbjct: 140 AAFLLYLYLPETHGSHVIYH 159
>U56961-3|AAK39294.1| 634|Caenorhabditis elegans Hypothetical
protein T19D7.4 protein.
Length = 634
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = -3
Query: 341 PGINCYTKKNCRINKLQCLSTYNDISVYLSNIGCGKSSITFEVR 210
PG+ C+ K+ K LS D+ +Y N+ G+ + VR
Sbjct: 472 PGLGCFVAKSSADEKSTSLSHIWDVILYFYNLKTGRDTTDAPVR 515
>U28941-4|AAM98024.1| 484|Caenorhabditis elegans Temporarily
assigned gene nameprotein 149, isoform c protein.
Length = 484
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = -3
Query: 557 NSTNSPLLQDENRFD-IGSIAPQQNAIGHN 471
N SP +D +F+ I SIAP+++A GH+
Sbjct: 162 NMDLSPTSRDSTQFEQIPSIAPEESAFGHD 191
>U28941-3|AAM98025.1| 799|Caenorhabditis elegans Temporarily
assigned gene nameprotein 149, isoform d protein.
Length = 799
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = -3
Query: 557 NSTNSPLLQDENRFD-IGSIAPQQNAIGHN 471
N SP +D +F+ I SIAP+++A GH+
Sbjct: 162 NMDLSPTSRDSTQFEQIPSIAPEESAFGHD 191
>U28941-2|AAC71103.1| 1091|Caenorhabditis elegans Temporarily
assigned gene nameprotein 149, isoform a protein.
Length = 1091
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = -3
Query: 557 NSTNSPLLQDENRFD-IGSIAPQQNAIGHN 471
N SP +D +F+ I SIAP+++A GH+
Sbjct: 162 NMDLSPTSRDSTQFEQIPSIAPEESAFGHD 191
>U28941-1|AAC71102.1| 1107|Caenorhabditis elegans Temporarily
assigned gene nameprotein 149, isoform b protein.
Length = 1107
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = -3
Query: 557 NSTNSPLLQDENRFD-IGSIAPQQNAIGHN 471
N SP +D +F+ I SIAP+++A GH+
Sbjct: 162 NMDLSPTSRDSTQFEQIPSIAPEESAFGHD 191
>Z81538-1|CAB04383.1| 569|Caenorhabditis elegans Hypothetical
protein F45H10.1 protein.
Length = 569
Score = 27.5 bits (58), Expect = 8.3
Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 3/26 (11%)
Frame = +1
Query: 463 FIVLC---PMAFCCGAMLPMSKRFSS 531
FI+LC P+ FC + PM KRF S
Sbjct: 533 FILLCCFPPVFFCFSQLFPMLKRFPS 558
>AF000196-9|AAO61448.1| 395|Caenorhabditis elegans Hypothetical
protein B0041.2c protein.
Length = 395
Score = 27.5 bits (58), Expect = 8.3
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = -1
Query: 334 STVIPRKTV---ESTSSSVSPLTMILVSTCLTLGVVKAQ*PSRLEAVGRQKKYRDNIK 170
S V P T+ S SSS P+ M+++S +G S L+ G QKK +N+K
Sbjct: 164 SMVPPHPTMGVGSSASSSSIPIGMLMMSGSGNVGGGPPSSSSLLDEDGSQKKLAENLK 221
>AF000196-8|AAL11096.1| 624|Caenorhabditis elegans Hypothetical
protein B0041.2b protein.
Length = 624
Score = 27.5 bits (58), Expect = 8.3
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = -1
Query: 334 STVIPRKTV---ESTSSSVSPLTMILVSTCLTLGVVKAQ*PSRLEAVGRQKKYRDNIK 170
S V P T+ S SSS P+ M+++S +G S L+ G QKK +N+K
Sbjct: 393 SMVPPHPTMGVGSSASSSSIPIGMLMMSGSGNVGGGPPSSSSLLDEDGSQKKLAENLK 450
>AF000196-7|AAC24251.2| 706|Caenorhabditis elegans Hypothetical
protein B0041.2a protein.
Length = 706
Score = 27.5 bits (58), Expect = 8.3
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = -1
Query: 334 STVIPRKTV---ESTSSSVSPLTMILVSTCLTLGVVKAQ*PSRLEAVGRQKKYRDNIK 170
S V P T+ S SSS P+ M+++S +G S L+ G QKK +N+K
Sbjct: 475 SMVPPHPTMGVGSSASSSSIPIGMLMMSGSGNVGGGPPSSSSLLDEDGSQKKLAENLK 532
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,307,261
Number of Sequences: 27780
Number of extensions: 282627
Number of successful extensions: 716
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 699
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 716
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1374536540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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