BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= an--0617 (628 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 21 7.4 EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase p... 21 9.8 AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 21 9.8 >AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor protein. Length = 1370 Score = 21.4 bits (43), Expect = 7.4 Identities = 7/25 (28%), Positives = 14/25 (56%) Frame = +3 Query: 531 LQKRAIRAIYNMHTRESLTDKFKEI 605 ++ A +YN+HT E +K + + Sbjct: 374 IESNAFLPLYNLHTLELSDNKLRTV 398 >EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase protein. Length = 620 Score = 21.0 bits (42), Expect = 9.8 Identities = 10/21 (47%), Positives = 10/21 (47%) Frame = -2 Query: 372 LTCICEDPTAAWNQLLYQEKL 310 LT C D A WN L Q L Sbjct: 431 LTMSCSDKIARWNVLGVQGAL 451 >AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic acetylcholine receptoralpha-3 protein. Length = 537 Score = 21.0 bits (42), Expect = 9.8 Identities = 11/36 (30%), Positives = 17/36 (47%) Frame = +3 Query: 417 TYTDEDTARLVYFSYFHSVMSYGILLWGNAADVETI 524 TY D + FS+ SV Y + L G+ E++ Sbjct: 377 TYMDSGYTNEIDFSFPDSVSDYPLELKGSPDGFESV 412 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 156,751 Number of Sequences: 438 Number of extensions: 3286 Number of successful extensions: 5 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 5 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5 length of database: 146,343 effective HSP length: 55 effective length of database: 122,253 effective search space used: 18704709 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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