Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0615
         (683 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    22   5.4  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   9.4  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   9.4  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   9.4  

>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +1

Query: 13  YLIWVFLRVPYWV 51
           YLI++F+ V +WV
Sbjct: 96  YLIFIFVNVFFWV 108



 Score = 21.0 bits (42), Expect = 9.4
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = -3

Query: 483 NKLDVPYLHQYTFVFFLPQTLQN 415
           + +D PYL  YT++  +   L +
Sbjct: 41  SSIDRPYLKSYTYIKLVVSVLMD 63


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +3

Query: 378 WGPHICKLANR 410
           W PH CKL ++
Sbjct: 493 WVPHSCKLTSK 503


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +3

Query: 483 FSYFHSVMSYGILLW 527
           ++ +  V S+G+LLW
Sbjct: 671 YTTYSDVWSFGVLLW 685


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 682 YNKFSKMYWDAKVR 641
           YN F+K + DAK R
Sbjct: 196 YNPFAKAFLDAKER 209


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,087
Number of Sequences: 336
Number of extensions: 3675
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)