BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= an--0615 (683 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 02_05_0854 - 32267047-32267298,32267383-32268194,32268289-322684... 33 0.21 02_05_0853 + 32261705-32261794,32261895-32262027,32262117-322629... 33 0.21 06_03_1380 + 29747187-29747267,29747349-29747481,29747758-297477... 29 3.4 08_01_0025 - 184899-185384,185707-185940,187156-187341,188108-18... 28 7.9 04_01_0097 - 998766-999383,999479-999861,1000021-1000398,1000486... 28 7.9 >02_05_0854 - 32267047-32267298,32267383-32268194,32268289-32268421, 32268530-32268619 Length = 428 Score = 33.1 bits (72), Expect = 0.21 Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 5/43 (11%) Frame = +3 Query: 285 QVDTNIIVSGETLELVDST----VFLGITVDSRLQWGPH-ICK 398 QV +I+++ T E D +F G T DSRL WGPH IC+ Sbjct: 108 QVIADIVINHRTAEHKDGRGIYCLFEGGTPDSRLDWGPHMICR 150 >02_05_0853 + 32261705-32261794,32261895-32262027,32262117-32262928, 32263020-32263271 Length = 428 Score = 33.1 bits (72), Expect = 0.21 Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 5/43 (11%) Frame = +3 Query: 285 QVDTNIIVSGETLELVDST----VFLGITVDSRLQWGPH-ICK 398 QV +I+++ T E D +F G T DSRL WGPH IC+ Sbjct: 108 QVIADIVINHRTAEHKDGRGIYCLFEGGTPDSRLDWGPHMICR 150 >06_03_1380 + 29747187-29747267,29747349-29747481,29747758-29747770, 29748027-29748118,29749011-29749831,29750375-29750677 Length = 480 Score = 29.1 bits (62), Expect = 3.4 Identities = 12/20 (60%), Positives = 14/20 (70%), Gaps = 1/20 (5%) Frame = +3 Query: 342 VFLGITVDSRLQWGPH-ICK 398 +F G T D RL WGPH IC+ Sbjct: 163 IFEGGTPDGRLDWGPHMICR 182 >08_01_0025 - 184899-185384,185707-185940,187156-187341,188108-188158 Length = 318 Score = 27.9 bits (59), Expect = 7.9 Identities = 13/44 (29%), Positives = 25/44 (56%) Frame = -1 Query: 254 FCFFVI**QIINTKPMYHARDSIIHIVIIFQLSFNFKQ*GCIIS 123 FC+FV +I+ P Y+A +I+ + I+ + N++ C +S Sbjct: 48 FCYFVAR-HLIHMFPAYNAGYAILAVTIVLSIYRNYRYFFCFVS 90 >04_01_0097 - 998766-999383,999479-999861,1000021-1000398, 1000486-1000711,1000799-1001323,1003032-1003164, 1004353-1004435,1004645-1005349,1005483-1005556, 1006290-1006392,1006485-1006727 Length = 1156 Score = 27.9 bits (59), Expect = 7.9 Identities = 18/62 (29%), Positives = 25/62 (40%), Gaps = 1/62 (1%) Frame = +3 Query: 396 KLANRLSSAAFAVKKIRTYTDEDTAR-LVYFSYFHSVMSYGILLWGNAADVETIFILQKR 572 +L +RL + V +E A L HSV S G L W + V F + R Sbjct: 530 RLCSRLKNKGLLVDTFHVSVEEQVAMFLKKVGQHHSVPSVGFLFWRSGETVSRYFHIVLR 589 Query: 573 AI 578 A+ Sbjct: 590 AM 591 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,465,715 Number of Sequences: 37544 Number of extensions: 342985 Number of successful extensions: 761 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 747 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 760 length of database: 14,793,348 effective HSP length: 80 effective length of database: 11,789,828 effective search space used: 1733104716 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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