BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0615
(683 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC031485-1|AAH31485.1| 690|Homo sapiens ACACA protein protein. 30 6.7
AY315627-1|AAP94122.1| 2346|Homo sapiens acetyl-CoA carboxylase ... 30 6.7
AY237919-1|AAP69841.1| 2346|Homo sapiens acetyl-CoA carboxylase ... 30 6.7
AB209325-1|BAD92562.1| 998|Homo sapiens acetyl-Coenzyme A carbo... 30 6.7
U19822-1|AAC50139.1| 2346|Homo sapiens acetyl-CoA carboxylase pr... 30 8.8
>BC031485-1|AAH31485.1| 690|Homo sapiens ACACA protein protein.
Length = 690
Score = 30.3 bits (65), Expect = 6.7
Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = -1
Query: 638 FDFLKLVPQGFPRVHIINSTNSPLLQD--ENRFDIGSIAPQQNAIGHNTMK 492
+ +L L PQ + RV +NS + ++D E+R+ I I ++ IG ++
Sbjct: 92 YRYLYLTPQDYKRVSALNSVHCEHVEDEGESRYKITDIIGKEEGIGPENLR 142
>AY315627-1|AAP94122.1| 2346|Homo sapiens acetyl-CoA carboxylase 1
protein.
Length = 2346
Score = 30.3 bits (65), Expect = 6.7
Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = -1
Query: 638 FDFLKLVPQGFPRVHIINSTNSPLLQD--ENRFDIGSIAPQQNAIGHNTMK 492
+ +L L PQ + RV +NS + ++D E+R+ I I ++ IG ++
Sbjct: 1748 YRYLYLTPQDYKRVSALNSVHCEHVEDEGESRYKITDIIGKEEGIGPENLR 1798
>AY237919-1|AAP69841.1| 2346|Homo sapiens acetyl-CoA carboxylase alpha
protein.
Length = 2346
Score = 30.3 bits (65), Expect = 6.7
Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = -1
Query: 638 FDFLKLVPQGFPRVHIINSTNSPLLQD--ENRFDIGSIAPQQNAIGHNTMK 492
+ +L L PQ + RV +NS + ++D E+R+ I I ++ IG ++
Sbjct: 1748 YRYLYLTPQDYKRVSALNSVHCEHVEDEGESRYKITDIIGKEEGIGPENLR 1798
>AB209325-1|BAD92562.1| 998|Homo sapiens acetyl-Coenzyme A
carboxylase alpha isoform 2 variant protein.
Length = 998
Score = 30.3 bits (65), Expect = 6.7
Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = -1
Query: 638 FDFLKLVPQGFPRVHIINSTNSPLLQD--ENRFDIGSIAPQQNAIGHNTMK 492
+ +L L PQ + RV +NS + ++D E+R+ I I ++ IG ++
Sbjct: 400 YRYLYLTPQDYKRVSALNSVHCEHVEDEGESRYKITDIIGKEEGIGPENLR 450
>U19822-1|AAC50139.1| 2346|Homo sapiens acetyl-CoA carboxylase
protein.
Length = 2346
Score = 29.9 bits (64), Expect = 8.8
Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = -1
Query: 638 FDFLKLVPQGFPRVHIINSTNSPLLQD--ENRFDIGSIAPQQNAIGHNTMK 492
+ +L L PQ + RV +NS + ++D E+R+ I I ++ IG ++
Sbjct: 1748 YRYLYLTPQDYKRVGALNSVHCEHVEDEGESRYKITDIIGKEEGIGPENLR 1798
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,313,887
Number of Sequences: 237096
Number of extensions: 2074408
Number of successful extensions: 4090
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3940
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4090
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7783251346
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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