BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= an--0614 (505 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPBC4.06 |||acid phosphatase |Schizosaccharomyces pombe|chr 2|||... 29 0.30 SPAC6G9.04 |mug79||meiotically upregulated gene Mug79|Schizosacc... 26 3.7 SPAPB1A10.11c |||glutamyl-tRNA synthetase, mitochondrial|Schizos... 25 8.5 >SPBC4.06 |||acid phosphatase |Schizosaccharomyces pombe|chr 2|||Manual Length = 462 Score = 29.5 bits (63), Expect = 0.30 Identities = 15/42 (35%), Positives = 23/42 (54%) Frame = -3 Query: 356 RIQYRYLQVDLLSHGRYVPAKTRVVTNRVI*DYKLVQNGDMF 231 ++Q +YLQV + HG P K R+ + + D+KL N F Sbjct: 23 QLQLKYLQV-IFRHGERAPVKERLGSAGIPKDWKLCNNARRF 63 >SPAC6G9.04 |mug79||meiotically upregulated gene Mug79|Schizosaccharomyces pombe|chr 1|||Manual Length = 1318 Score = 25.8 bits (54), Expect = 3.7 Identities = 12/43 (27%), Positives = 22/43 (51%) Frame = +3 Query: 258 IVSYNTVCHNTRLCRNVSTV*KEVYL*VPILYPTIPPSVQATR 386 ++ Y + + C NVS + +E L + P +PPS+ + R Sbjct: 1080 LIFYKSDHLDPNACSNVSPIHREFGLQSCLASPNLPPSINSNR 1122 >SPAPB1A10.11c |||glutamyl-tRNA synthetase, mitochondrial|Schizosaccharomyces pombe|chr 1|||Manual Length = 526 Score = 24.6 bits (51), Expect = 8.5 Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 2/39 (5%) Frame = -1 Query: 433 KRMLSDSQIFIYFI--NLRVAWTEGGIVGYNIGTYR*TS 323 KR ++ S + IY + + W EG IVG G Y +S Sbjct: 78 KRKVTGSDLEIYKVLKQFNLQWDEGPIVGGPYGPYEQSS 116 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,028,739 Number of Sequences: 5004 Number of extensions: 41485 Number of successful extensions: 80 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 80 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 80 length of database: 2,362,478 effective HSP length: 68 effective length of database: 2,022,206 effective search space used: 200198394 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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