Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0614
         (505 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U56244-1|AAC25432.1|  722|Homo sapiens hypoxia-inducible HIG-1 p...    33   0.75 
U42391-1|AAC50402.1| 2022|Homo sapiens myosin-IXb protein.             29   9.2  
AB209997-1|BAE06079.1| 2028|Homo sapiens MYO9B variant protein p...    29   9.2  

>U56244-1|AAC25432.1|  722|Homo sapiens hypoxia-inducible HIG-1
           protein.
          Length = 722

 Score = 32.7 bits (71), Expect = 0.75
 Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
 Frame = -1

Query: 481 LLSRYP*R-AHCYLIRTKRMLSDSQIFIYFINLRVAWTEGGIVGYNIGTYR*TSFHTVDT 305
           +L  Y  R A+C ++ T+     +     +I+   AWT GG+VGY +G  +  +  T   
Sbjct: 92  ILDHYVQRSAYCSIVVTQPRKIGASSIARWISKERAWTLGGVVGYQVGLEKIATEDTRLI 151

Query: 304 FLQRRVL*QTVL 269
           ++   VL Q ++
Sbjct: 152 YMTTGVLLQKIV 163


>U42391-1|AAC50402.1| 2022|Homo sapiens myosin-IXb protein.
          Length = 2022

 Score = 29.1 bits (62), Expect = 9.2
 Identities = 15/59 (25%), Positives = 26/59 (44%)
 Frame = +2

Query: 284 QHASLQERIYRVKGGLPVGTYIVSDNTAFCPSYTKIYEINKNLRIGQHAFSAYQITVCT 460
           +H  LQ++IY   G + V          + P Y K+YE  +  ++  H F+   +   T
Sbjct: 167 KHRFLQQKIYTYAGSILVAINPFKFLPIYNPKYVKMYENQQLGKLEPHVFALADVAYYT 225


>AB209997-1|BAE06079.1| 2028|Homo sapiens MYO9B variant protein
           protein.
          Length = 2028

 Score = 29.1 bits (62), Expect = 9.2
 Identities = 15/59 (25%), Positives = 26/59 (44%)
 Frame = +2

Query: 284 QHASLQERIYRVKGGLPVGTYIVSDNTAFCPSYTKIYEINKNLRIGQHAFSAYQITVCT 460
           +H  LQ++IY   G + V          + P Y K+YE  +  ++  H F+   +   T
Sbjct: 173 KHRFLQQKIYTYAGSILVAINPFKFLPIYNPKYVKMYENQQLGKLEPHVFALADVAYYT 231


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,271,870
Number of Sequences: 237096
Number of extensions: 1282425
Number of successful extensions: 1912
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1856
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1912
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4649883964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)