Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0613
         (603 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    23   2.0  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    21   6.1  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   8.0  

>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -3

Query: 91  RYFWFLNCILYQSLTTLFY 35
           +Y+W   C L  S+ T+F+
Sbjct: 54  KYYWLNVCCLNLSIVTIFF 72


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 11/38 (28%), Positives = 17/38 (44%)
 Frame = -3

Query: 184 KNPVVNGAPDYRLCLL*AEQFFEVAKFYLILRYFWFLN 71
           K+     APDYR   +   + F   K + +LR +   N
Sbjct: 334 KHEQQGAAPDYRHWQIPLGRRFRALKLWFVLRLYGIEN 371


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 7/24 (29%), Positives = 13/24 (54%)
 Frame = -1

Query: 534 RCNYCMKNISFL*IMECHCHFLVI 463
           R  + MKN  +L ++    HF+ +
Sbjct: 12  RSTHSMKNFKYLKVLVTFAHFICL 35


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,962
Number of Sequences: 336
Number of extensions: 3271
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15248386
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)