Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0613
         (603 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0030 + 5129234-5129568,5130020-5130651,5130936-5131243,513...    28   6.5  
01_05_0121 - 18361285-18361560,18361828-18362073,18362331-18362519     27   8.7  

>03_02_0030 +
           5129234-5129568,5130020-5130651,5130936-5131243,
           5131396-5131504,5131871-5131956,5132173-5132232,
           5133164-5133340,5133742-5133780
          Length = 581

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 15/39 (38%), Positives = 18/39 (46%)
 Frame = -1

Query: 315 TKNDFFWH*YNFTSIFAAVTQGSLLCNRYPRSTDSVESG 199
           TKN F WH Y F S F + +      + Y  S DS   G
Sbjct: 169 TKNPFSWHRYPFLSRFRSNSGDKKDTSHYVSSMDSEYEG 207


>01_05_0121 - 18361285-18361560,18361828-18362073,18362331-18362519
          Length = 236

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -2

Query: 476 ISLLLCTYVLNSCTSHHIVKCIHNPNKVFC 387
           + LLL T   N+CTSHH      N   +FC
Sbjct: 10  LELLLSTQFFNTCTSHH--NSPRNECNLFC 37


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,828,868
Number of Sequences: 37544
Number of extensions: 261527
Number of successful extensions: 436
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 429
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 436
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1431112012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)