Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0611
         (752 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q22CB6 Cluster: Putative uncharacterized protein; n=1; ...    34   3.3  
UniRef50_Q6FIT1 Cluster: Similar to sp|P13365 Saccharomyces cere...    33   7.6  
UniRef50_Q3LW86 Cluster: Putative uncharacterized protein; n=1; ...    33   10.0 

>UniRef50_Q22CB6 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1091

 Score = 34.3 bits (75), Expect = 3.3
 Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
 Frame = -3

Query: 549 TTLG*RHRFTLMLFCVCM*LI*RIVNLYKEALHKSNKNL--KKHSFFS----YTLSKFNM 388
           +TLG +  + L +F  C  L  +IVN  ++ L + NK++   K+SFFS    ++LS F +
Sbjct: 359 STLGCKFHYFLSIFSQCQELRNKIVNFDQKYL-QDNKSILENKNSFFSNFKNFSLSSFPL 417

Query: 387 GEIVS*ATIYIHYLPE 340
            E    + ++I+ LP+
Sbjct: 418 YETKQLSEMFINILPQ 433


>UniRef50_Q6FIT1 Cluster: Similar to sp|P13365 Saccharomyces
           cerevisiae YAL040c CLN3; n=1; Candida glabrata|Rep:
           Similar to sp|P13365 Saccharomyces cerevisiae YAL040c
           CLN3 - Candida glabrata (Yeast) (Torulopsis glabrata)
          Length = 617

 Score = 33.1 bits (72), Expect = 7.6
 Identities = 17/44 (38%), Positives = 27/44 (61%)
 Frame = -2

Query: 229 VINLMTNP*IVQLKPIKSKAAKSNSVKYSGKLQKSALNTSLRIL 98
           V+N+ + P   + K I SK    NS ++SG+ Q++ + TS RIL
Sbjct: 294 VVNIDSLPSSFKFKYISSKMPAGNSKRFSGREQQNGIPTSKRIL 337


>UniRef50_Q3LW86 Cluster: Putative uncharacterized protein; n=1;
           Bigelowiella natans|Rep: Putative uncharacterized
           protein - Bigelowiella natans (Pedinomonas minutissima)
           (Chlorarachnion sp.(strain CCMP 621))
          Length = 224

 Score = 32.7 bits (71), Expect = 10.0
 Identities = 18/59 (30%), Positives = 34/59 (57%)
 Frame = +1

Query: 199 LFMDWSLSLLRSITRNNFVKF*IWPRIEKRLYKLNL*LSIIISYFKYFW*IMYVNRRLA 375
           L +DW L L + ++ N   KF IW ++EK + K N  L ++++ + YF  I  ++ + +
Sbjct: 144 LSIDWILLLKKELSYNQ--KFYIWKKVEKTIKKDNFFL-LLLNKYSYFKNIFQLSHKFS 199


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 637,699,791
Number of Sequences: 1657284
Number of extensions: 11112207
Number of successful extensions: 21480
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 20820
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21477
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62146450145
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)