BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= an--0610 (500 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPAC637.13c |||cytoskeletal signaling protein|Schizosaccharomyce... 31 0.13 SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 28 0.91 SPBC2F12.05c |||sterol binding ankyrin repeat protein|Schizosacc... 27 1.2 SPBC16D10.04c |dna2||DNA replication endonuclease-helicase Dna2|... 27 1.6 SPAC1B3.05 |||CCR4-Not complex subunit Not3/5 |Schizosaccharomyc... 27 2.1 SPBC14C8.07c |cdc18||MCM loader|Schizosaccharomyces pombe|chr 2|... 27 2.1 SPAC24C9.14 |otu1|mug141|ubiquitin-specific protease |Schizosacc... 27 2.1 SPBC1289.02c |uap2||U2 snRNP-associated protein Uap2|Schizosacch... 26 2.8 SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces pom... 26 2.8 SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 26 2.8 SPCC320.03 |||transcription factor |Schizosaccharomyces pombe|ch... 26 3.7 SPAC1805.02c |||electron transfer flavoprotein beta subunit |Sch... 26 3.7 SPBC14C8.15 |||triglyceride lipase-cholesterol esterase |Schizos... 26 3.7 SPAC1F3.02c |mkh1||MEK kinase |Schizosaccharomyces pombe|chr 1||... 25 6.4 SPBC428.20c |alp6|SPBC902.01c|gamma tubulin complex Spc98/GCP3 s... 25 6.4 SPBC18H10.18c |||sequence orphan|Schizosaccharomyces pombe|chr 2... 25 6.4 SPCC1682.06 |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 25 6.4 SPBC3E7.12c |chr1|cfh4|chitin synthase regulatory factor |Schizo... 25 8.4 SPBC20F10.05 |||DuF1740 family protein|Schizosaccharomyces pombe... 25 8.4 >SPAC637.13c |||cytoskeletal signaling protein|Schizosaccharomyces pombe|chr 1|||Manual Length = 498 Score = 30.7 bits (66), Expect = 0.13 Identities = 21/86 (24%), Positives = 39/86 (45%) Frame = -2 Query: 481 KILQCCDNNDISKKCSLPPENNETLNSDPLNLCTLVQNCNQLKISSESNEPPTKSTHSDS 302 K L D + + S PP N + +DP + V NC ++ E+N + + Sbjct: 159 KYLSLLDRALLPWRASSPPTVN--IKNDPFIVDRQVLNCLARQVQEENNHSVAVAQLQEF 216 Query: 301 STKWWRNDIAKLKEKNQAKQSTQNNS 224 S ++ +N IAK+K+ + + N + Sbjct: 217 SFRFEQNLIAKIKDTVKQFEGMMNQT 242 >SPCC162.08c |nup211||nuclear pore complex associated protein|Schizosaccharomyces pombe|chr 3|||Manual Length = 1837 Score = 27.9 bits (59), Expect = 0.91 Identities = 20/75 (26%), Positives = 31/75 (41%), Gaps = 5/75 (6%) Frame = -2 Query: 400 DPLNLCTLVQNCNQLKISSESNEPPTKSTHSDSSTKWWRNDIAKLKE-----KNQAKQST 236 DP L L +NC L+ E E TK + T ++ + L E K + +Q+ Sbjct: 1350 DPTQLEELKKNCEALE--KEKQELETKLQETAKETDTFKQQVNSLNEEVENLKKEVEQAN 1407 Query: 235 QNNSCCQQALNPPCD 191 N+ A N C+ Sbjct: 1408 TKNTRLAAAWNEKCE 1422 >SPBC2F12.05c |||sterol binding ankyrin repeat protein|Schizosaccharomyces pombe|chr 2|||Manual Length = 1310 Score = 27.5 bits (58), Expect = 1.2 Identities = 14/64 (21%), Positives = 28/64 (43%) Frame = -2 Query: 424 ENNETLNSDPLNLCTLVQNCNQLKISSESNEPPTKSTHSDSSTKWWRNDIAKLKEKNQAK 245 +NN ++P V + SSE P+ T +D S+ + +IA +++ Sbjct: 574 DNNHANKAEPSQTANNVHEIREPSFSSEHKPQPSLKTTTDVSSPETKQNIADIRKTTLTD 633 Query: 244 QSTQ 233 Q+ + Sbjct: 634 QTEE 637 >SPBC16D10.04c |dna2||DNA replication endonuclease-helicase Dna2|Schizosaccharomyces pombe|chr 2|||Manual Length = 1398 Score = 27.1 bits (57), Expect = 1.6 Identities = 12/33 (36%), Positives = 19/33 (57%) Frame = -2 Query: 454 DISKKCSLPPENNETLNSDPLNLCTLVQNCNQL 356 D+ CS ++ T+N +P+NL L + CN L Sbjct: 300 DLQSYCSATKASDATINEEPVNL-ALDKACNSL 331 >SPAC1B3.05 |||CCR4-Not complex subunit Not3/5 |Schizosaccharomyces pombe|chr 1|||Manual Length = 630 Score = 26.6 bits (56), Expect = 2.1 Identities = 19/83 (22%), Positives = 39/83 (46%), Gaps = 3/83 (3%) Frame = -2 Query: 376 VQNCNQLKISSESNEPPTKSTHSD---SSTKWWRNDIAKLKEKNQAKQSTQNNSCCQQAL 206 V++ +Q ++E+N PTK ++D SS + ++ + L + + + +AL Sbjct: 433 VRSVSQSSATTETNVKPTKEENADVPVSSPDYLKDLVNALNTSKEQHKGAIDKEKLTEAL 492 Query: 205 NPPCDVTIDELASYFETLVHIPK 137 N C V + + + +IPK Sbjct: 493 NISC-VYVPDATDAAKPQYYIPK 514 >SPBC14C8.07c |cdc18||MCM loader|Schizosaccharomyces pombe|chr 2|||Manual Length = 577 Score = 26.6 bits (56), Expect = 2.1 Identities = 11/33 (33%), Positives = 15/33 (45%) Frame = +1 Query: 151 PGFRNN*LIHQLLHHKVDSKPADNMNYFGCFVL 249 PG L+H +L H V P N+ Y C + Sbjct: 201 PGTGKTVLLHNVLDHVVSDYPKVNVCYINCMTI 233 >SPAC24C9.14 |otu1|mug141|ubiquitin-specific protease |Schizosaccharomyces pombe|chr 1|||Manual Length = 329 Score = 26.6 bits (56), Expect = 2.1 Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 5/60 (8%) Frame = -2 Query: 457 NDISKKCSLPPENNETLNSDPLNLCTLVQNCNQLKI-----SSESNEPPTKSTHSDSSTK 293 N I+ K PP++ +NSD + L TLV + Q+ + +S S P K +++TK Sbjct: 41 NSIALKFGFPPQDIPLVNSD-VPLSTLVSSGQQILVLKNAATSFSTNEPAKPPIPNAATK 99 >SPBC1289.02c |uap2||U2 snRNP-associated protein Uap2|Schizosaccharomyces pombe|chr 2|||Manual Length = 367 Score = 26.2 bits (55), Expect = 2.8 Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 4/81 (4%) Frame = -2 Query: 355 KISSESNEPPTKSTHSDSSTKWWRNDIAKLKEKNQAKQSTQ----NNSCCQQALNPPCDV 188 K SS + TK + +S + + + K K++ +++ N + Q L P DV Sbjct: 64 KESSNGEDRHTKRLYESTSAEGYPSGSRNKKSKSENSEASPAPVINKAVYIQGL--PLDV 121 Query: 187 TIDELASYFETLVHIPKKMSS 125 T+DE+ F+ I K + + Sbjct: 122 TVDEIEEVFKKCGVIAKNIDN 142 >SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces pombe|chr 2|||Manual Length = 569 Score = 26.2 bits (55), Expect = 2.8 Identities = 12/41 (29%), Positives = 22/41 (53%) Frame = -2 Query: 349 SSESNEPPTKSTHSDSSTKWWRNDIAKLKEKNQAKQSTQNN 227 S ++NE P K + +++ K + D +KEK + QN+ Sbjct: 525 SKDTNEKPAKDDNKEANEKAEKVDSKDVKEKIEEAADLQNS 565 >SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces pombe|chr 1|||Manual Length = 1957 Score = 26.2 bits (55), Expect = 2.8 Identities = 20/79 (25%), Positives = 37/79 (46%) Frame = -2 Query: 463 DNNDISKKCSLPPENNETLNSDPLNLCTLVQNCNQLKISSESNEPPTKSTHSDSSTKWWR 284 +NND+ K E+N++L ++ +L +N LK +E + S K R Sbjct: 659 ENNDLRTKLLKLEESNKSLIKKQEDVDSLEKNIQTLKEDLRKSEEALR--FSKLEAKNLR 716 Query: 283 NDIAKLKEKNQAKQSTQNN 227 I LK K++ ++ +N+ Sbjct: 717 EVIDNLKGKHETLEAQRND 735 Score = 25.4 bits (53), Expect = 4.8 Identities = 13/42 (30%), Positives = 23/42 (54%) Frame = -2 Query: 352 ISSESNEPPTKSTHSDSSTKWWRNDIAKLKEKNQAKQSTQNN 227 ++S SNE KS D + N ++KE+ + +STQ++ Sbjct: 471 LNSSSNELKEKSALIDKKDQELNNLREQIKEQKKVSESTQSS 512 >SPCC320.03 |||transcription factor |Schizosaccharomyces pombe|chr 3|||Manual Length = 867 Score = 25.8 bits (54), Expect = 3.7 Identities = 12/44 (27%), Positives = 22/44 (50%) Frame = -2 Query: 433 LPPENNETLNSDPLNLCTLVQNCNQLKISSESNEPPTKSTHSDS 302 LPP N T+N N+ + + + + SN P T ++++ S Sbjct: 323 LPPRGNPTVNDRVSNVLPSITSFDSSVTTVPSNSPATLNSYTTS 366 >SPAC1805.02c |||electron transfer flavoprotein beta subunit |Schizosaccharomyces pombe|chr 1|||Manual Length = 254 Score = 25.8 bits (54), Expect = 3.7 Identities = 12/39 (30%), Positives = 22/39 (56%) Frame = -2 Query: 268 LKEKNQAKQSTQNNSCCQQALNPPCDVTIDELASYFETL 152 LK + A ++ + S + ++NP CD+ ++E ETL Sbjct: 18 LKPRINATKTAVDLSGQKMSINPFCDIAVEEAIRMKETL 56 >SPBC14C8.15 |||triglyceride lipase-cholesterol esterase |Schizosaccharomyces pombe|chr 2|||Manual Length = 460 Score = 25.8 bits (54), Expect = 3.7 Identities = 16/70 (22%), Positives = 30/70 (42%) Frame = +1 Query: 277 YHFATILCYYHYALI*LVVHSTLKISSTGYNFAPMYTNLMGRYSMFHYFLVVDYISLIYR 456 Y F ++ C+ H+A I L++ F P Y + R + + + I+L+Y Sbjct: 322 YSFTSVKCFVHWAQI--TRRKVLQMYDDSPGFKPSYYTNLNRIARYPIENIRLPITLVYG 379 Query: 457 YYHNIAEFLT 486 N+ + T Sbjct: 380 SNDNMVDIET 389 >SPAC1F3.02c |mkh1||MEK kinase |Schizosaccharomyces pombe|chr 1|||Manual Length = 1116 Score = 25.0 bits (52), Expect = 6.4 Identities = 13/46 (28%), Positives = 21/46 (45%) Frame = -2 Query: 265 KEKNQAKQSTQNNSCCQQALNPPCDVTIDELASYFETLVHIPKKMS 128 K K + + Q +SC ++ L P + S +ETL + K S Sbjct: 78 KNKLSKESAIQLSSCIRKTLLAPSSTRVPSKNSSYETLTYSAKDSS 123 >SPBC428.20c |alp6|SPBC902.01c|gamma tubulin complex Spc98/GCP3 subunit Alp6|Schizosaccharomyces pombe|chr 2|||Manual Length = 821 Score = 25.0 bits (52), Expect = 6.4 Identities = 8/24 (33%), Positives = 15/24 (62%) Frame = -2 Query: 217 QQALNPPCDVTIDELASYFETLVH 146 Q + NP TI+ + S+F+ ++H Sbjct: 19 QNSKNPSVPYTIETIVSFFQEIIH 42 >SPBC18H10.18c |||sequence orphan|Schizosaccharomyces pombe|chr 2|||Manual Length = 242 Score = 25.0 bits (52), Expect = 6.4 Identities = 14/32 (43%), Positives = 18/32 (56%) Frame = +1 Query: 400 RYSMFHYFLVVDYISLIYRYYHNIAEFLTQAL 495 RY++FH FL +I L YHN + QAL Sbjct: 74 RYAIFHIFL--PFI-LTLLLYHNFYNYFDQAL 102 >SPCC1682.06 |||sequence orphan|Schizosaccharomyces pombe|chr 3|||Manual Length = 238 Score = 25.0 bits (52), Expect = 6.4 Identities = 14/32 (43%), Positives = 18/32 (56%) Frame = +1 Query: 400 RYSMFHYFLVVDYISLIYRYYHNIAEFLTQAL 495 RY++FH FL +I L YHN + QAL Sbjct: 74 RYAIFHIFL--PFI-LTLLLYHNFYNYFDQAL 102 >SPBC3E7.12c |chr1|cfh4|chitin synthase regulatory factor |Schizosaccharomyces pombe|chr 2|||Manual Length = 456 Score = 24.6 bits (51), Expect = 8.4 Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 2/45 (4%) Frame = -2 Query: 352 ISSESNEPPTKSTHSDSSTKWWRNDIAKLKE--KNQAKQSTQNNS 224 I+S SN S+HS SS+ W AKL K+ +K S +NS Sbjct: 107 IASFSNSAADVSSHSRSSSSW----SAKLSRFTKHASKPSLSSNS 147 >SPBC20F10.05 |||DuF1740 family protein|Schizosaccharomyces pombe|chr 2|||Manual Length = 972 Score = 24.6 bits (51), Expect = 8.4 Identities = 10/27 (37%), Positives = 15/27 (55%) Frame = -2 Query: 334 EPPTKSTHSDSSTKWWRNDIAKLKEKN 254 E ST +S +K+W +D K E+N Sbjct: 369 EKKLDSTFFESFSKFWNSDTPKFSEEN 395 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 1,999,719 Number of Sequences: 5004 Number of extensions: 41821 Number of successful extensions: 180 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 179 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 180 length of database: 2,362,478 effective HSP length: 68 effective length of database: 2,022,206 effective search space used: 198176188 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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