Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0610
         (500 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_43690| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.53 
SB_27793| Best HMM Match : Alpha_GJ (HMM E-Value=7.6)                  30   0.93 
SB_20441| Best HMM Match : DUF1394 (HMM E-Value=0)                     30   0.93 
SB_8748| Best HMM Match : Astacin (HMM E-Value=0)                      29   1.6  
SB_33335| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.2  
SB_915| Best HMM Match : GIY-YIG (HMM E-Value=0.67)                    29   2.8  
SB_33045| Best HMM Match : RVT_1 (HMM E-Value=3.4e-18)                 28   3.8  
SB_32608| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.0  
SB_39437| Best HMM Match : TLP-20 (HMM E-Value=1.5)                    27   6.6  
SB_31516| Best HMM Match : ATP-synt_E (HMM E-Value=7.1)                27   6.6  
SB_17994| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   6.6  
SB_2103| Best HMM Match : No HMM Matches (HMM E-Value=.)               27   6.6  
SB_2013| Best HMM Match : Lipase_GDSL (HMM E-Value=2.7)                27   6.6  
SB_51100| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   8.7  
SB_22454| Best HMM Match : Ribosomal_L35p (HMM E-Value=4.5)            27   8.7  
SB_19778| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   8.7  
SB_11081| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   8.7  

>SB_43690| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 780

 Score = 31.1 bits (67), Expect = 0.53
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = -2

Query: 373 QNCNQLKISSESNEPPTKSTHSDSSTKWWRNDI 275
           QNC+Q+ +     +  T+    DS TK+W++D+
Sbjct: 427 QNCSQMPLPLRMLKATTRQQKRDSITKFWKSDV 459


>SB_27793| Best HMM Match : Alpha_GJ (HMM E-Value=7.6)
          Length = 165

 Score = 30.3 bits (65), Expect = 0.93
 Identities = 19/87 (21%), Positives = 34/87 (39%)
 Frame = -2

Query: 418 NETLNSDPLNLCTLVQNCNQLKISSESNEPPTKSTHSDSSTKWWRNDIAKLKEKNQAKQS 239
           N+T  +   N   +  N N   +++ SN+    +  +D++     ND A     N    +
Sbjct: 42  NDTAMNTNANDTAMNTNANDTAMNTNSNDTAMNTNANDTAMNTNANDTAMNTNANDTAMN 101

Query: 238 TQNNSCCQQALNPPCDVTIDELASYFE 158
           T +N    Q  N   ++ I      FE
Sbjct: 102 TNSNDTAIQLNNDVLEIIIKTTLLSFE 128


>SB_20441| Best HMM Match : DUF1394 (HMM E-Value=0)
          Length = 522

 Score = 30.3 bits (65), Expect = 0.93
 Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = -2

Query: 490 PVLKILQCCDNNDISKKCSLPPENNETLNSDPLNLC-TLVQN 368
           P+LKIL       +S+  SLP EN     S   NLC T+++N
Sbjct: 160 PLLKILSDATTKFVSENKSLPIENTTDCLSTLANLCRTMIEN 201


>SB_8748| Best HMM Match : Astacin (HMM E-Value=0)
          Length = 757

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -2

Query: 250 AKQSTQNNSCCQQALNPPCDVT 185
           A Q++  +SCCQ A  PPC +T
Sbjct: 413 AGQASTGSSCCQSAAPPPCCMT 434



 Score = 28.7 bits (61), Expect = 2.8
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -2

Query: 250 AKQSTQNNSCCQQALNPPCDVTI 182
           A Q++  +SCCQ    PPC +T+
Sbjct: 462 AGQASMGSSCCQSPAPPPCCMTL 484


>SB_33335| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 262

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 18/68 (26%), Positives = 31/68 (45%)
 Frame = -2

Query: 436 SLPPENNETLNSDPLNLCTLVQNCNQLKISSESNEPPTKSTHSDSSTKWWRNDIAKLKEK 257
           SL   NN+T N    N C L  NC Q  +  ++      +  S++      N+  K + +
Sbjct: 187 SLATANNKTCNCRQKNACPLDGNCLQSSVIYQATVTRKDNNTSETYVGLTENEF-KTRYR 245

Query: 256 NQAKQSTQ 233
           N+ +Q+ Q
Sbjct: 246 NRQQQNMQ 253


>SB_915| Best HMM Match : GIY-YIG (HMM E-Value=0.67)
          Length = 336

 Score = 28.7 bits (61), Expect = 2.8
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = -2

Query: 436 SLPPENNETLNSDPLNLCTLVQNCNQLKISSESNEPPTKSTH 311
           SL   NN+T N    N C L  NC Q  +  ++ +  T  T+
Sbjct: 191 SLATANNKTCNCRQKNACPLDGNCLQSSVIYQATDNNTSETY 232


>SB_33045| Best HMM Match : RVT_1 (HMM E-Value=3.4e-18)
          Length = 1061

 Score = 28.3 bits (60), Expect = 3.8
 Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
 Frame = -2

Query: 382 TLVQNCNQLK--ISSESNEP-PTKSTHSDSSTKWWRNDIAKLKEKNQAKQSTQ 233
           +L +N N LK  +SS   E  P K + S  +  W+ +++ KLK K Q   +TQ
Sbjct: 538 SLQENWNMLKGKLSSLMEEYIPAKMSSSRYNLPWFTHNLKKLKRKVQRLYNTQ 590


>SB_32608| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 909

 Score = 27.9 bits (59), Expect = 5.0
 Identities = 12/44 (27%), Positives = 25/44 (56%)
 Frame = -2

Query: 346 SESNEPPTKSTHSDSSTKWWRNDIAKLKEKNQAKQSTQNNSCCQ 215
           S+ +  P  S+  D+++      I +  E+N ++ ST+N+S C+
Sbjct: 606 SQCSRDPLHSSSEDANSTGMLVGITQENERNSSEHSTRNSSNCE 649


>SB_39437| Best HMM Match : TLP-20 (HMM E-Value=1.5)
          Length = 424

 Score = 27.5 bits (58), Expect = 6.6
 Identities = 19/67 (28%), Positives = 35/67 (52%)
 Frame = -2

Query: 424 ENNETLNSDPLNLCTLVQNCNQLKISSESNEPPTKSTHSDSSTKWWRNDIAKLKEKNQAK 245
           +N+ T + +  ++  +VQN     I S+          +DS+T     ++AK+KEK   +
Sbjct: 109 QNSRTEHHENKDIWKMVQN-----ILSKLERIEEAIVKADSTTAETNFEVAKIKEKLANE 163

Query: 244 QSTQNNS 224
           ++T NNS
Sbjct: 164 EATINNS 170


>SB_31516| Best HMM Match : ATP-synt_E (HMM E-Value=7.1)
          Length = 179

 Score = 27.5 bits (58), Expect = 6.6
 Identities = 12/47 (25%), Positives = 24/47 (51%)
 Frame = -2

Query: 394 LNLCTLVQNCNQLKISSESNEPPTKSTHSDSSTKWWRNDIAKLKEKN 254
           L++ +LV N  Q  +S  +NE    +      T+W R+++ +   K+
Sbjct: 103 LDVASLVYNARQFYLSEFNNEEKAVAEQDFRPTRWIRSNLLRAPSKD 149


>SB_17994| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 766

 Score = 27.5 bits (58), Expect = 6.6
 Identities = 16/47 (34%), Positives = 23/47 (48%)
 Frame = -2

Query: 436 SLPPENNETLNSDPLNLCTLVQNCNQLKISSESNEPPTKSTHSDSST 296
           SL   NN+T N    N C L  NC Q  +  ++N   T+  ++ S T
Sbjct: 403 SLATANNKTCNCRQKNTCPLDGNCLQSSVIYQAN--VTRKDNNTSET 447


>SB_2103| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 219

 Score = 27.5 bits (58), Expect = 6.6
 Identities = 12/43 (27%), Positives = 21/43 (48%)
 Frame = -2

Query: 367 CNQLKISSESNEPPTKSTHSDSSTKWWRNDIAKLKEKNQAKQS 239
           C+  + S + N  P  S HSD  +     D + L ++NQ + +
Sbjct: 56  CSSSRSSLDENTTPVASDHSDQESNQRLFDTSNLVQQNQRRSN 98


>SB_2013| Best HMM Match : Lipase_GDSL (HMM E-Value=2.7)
          Length = 518

 Score = 27.5 bits (58), Expect = 6.6
 Identities = 14/50 (28%), Positives = 24/50 (48%)
 Frame = -2

Query: 415 ETLNSDPLNLCTLVQNCNQLKISSESNEPPTKSTHSDSSTKWWRNDIAKL 266
           + L+  P+NL  ++   N      +  E   +ST+    T+WWR  IA +
Sbjct: 113 KALDKKPVNLL-IIGGSNSAGGGIDRREGNIESTYYGIFTRWWRRTIAPI 161


>SB_51100| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 362

 Score = 27.1 bits (57), Expect = 8.7
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = -2

Query: 436 SLPPENNETLNSDPLNLCTLVQNCNQLKI 350
           SL   NN+T N    N C L  NC QL +
Sbjct: 124 SLATANNKTCNCIQKNACPLDGNCLQLSV 152


>SB_22454| Best HMM Match : Ribosomal_L35p (HMM E-Value=4.5)
          Length = 214

 Score = 27.1 bits (57), Expect = 8.7
 Identities = 19/69 (27%), Positives = 26/69 (37%)
 Frame = -2

Query: 436 SLPPENNETLNSDPLNLCTLVQNCNQLKISSESNEPPTKSTHSDSSTKWWRNDIAKLKEK 257
           SL   NN+T N    N C L  NC Q  +  ++      +  SD       N+  K +E 
Sbjct: 141 SLATANNKTCNCRQKNACPLDGNCLQSSVIYQATVTRKDNNTSDPYVGLTENEF-KTRET 199

Query: 256 NQAKQSTQN 230
                 T N
Sbjct: 200 TPPHSDTLN 208


>SB_19778| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 767

 Score = 27.1 bits (57), Expect = 8.7
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = -2

Query: 424 ENNETLNSDPLNLCTLVQNCNQLKISSESNEPP 326
           ENN+T   + ++L   +  C   + + E+N+PP
Sbjct: 31  ENNDTKKEENVSLADTITPCEPEEKARENNQPP 63


>SB_11081| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 226

 Score = 27.1 bits (57), Expect = 8.7
 Identities = 12/42 (28%), Positives = 22/42 (52%)
 Frame = -2

Query: 346 SESNEPPTKSTHSDSSTKWWRNDIAKLKEKNQAKQSTQNNSC 221
           +E +E   +  HS  + +  R   +K+K+KN   +   +NSC
Sbjct: 65  TEQHEDKQECIHSIGAYRTTRRQTSKVKKKNAVTRIRTSNSC 106


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,396,567
Number of Sequences: 59808
Number of extensions: 292302
Number of successful extensions: 1000
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 889
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 997
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1087245449
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)