Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0610
(500 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81494-13|CAN99682.1| 116|Caenorhabditis elegans Hypothetical p... 41 4e-04
Z81494-12|CAB04054.3| 199|Caenorhabditis elegans Hypothetical p... 41 4e-04
AC006832-8|AAF40000.1| 465|Caenorhabditis elegans Hypothetical ... 29 1.4
Z68218-4|CAA92474.1| 329|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z68131-2|CAA92218.1| 614|Caenorhabditis elegans Hypothetical pr... 29 2.5
AF106582-7|ABD94096.1| 806|Caenorhabditis elegans Hypothetical ... 28 4.4
AF106582-6|ABD94095.1| 834|Caenorhabditis elegans Hypothetical ... 28 4.4
AC090999-11|ABD63207.1| 356|Caenorhabditis elegans Hypothetical... 28 4.4
AF039045-8|AAB94199.1| 300|Caenorhabditis elegans Hypothetical ... 27 5.8
>Z81494-13|CAN99682.1| 116|Caenorhabditis elegans Hypothetical
protein F02E9.5b protein.
Length = 116
Score = 41.1 bits (92), Expect = 4e-04
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = -2
Query: 286 RNDIAKLKEKNQAKQSTQNNSCCQQALNPPCDVT--IDELASYFETLVHIPKKMSSMAEM 113
+ D+ L+ K++ C QA PP +DEL+ YF V + KMSS+AE
Sbjct: 54 KGDVESLRMCIFDKENILPKPCSVQAARPPSPEAEEVDELSEYFTHFVRVELKMSSLAES 113
Query: 112 MYI 104
MY+
Sbjct: 114 MYV 116
>Z81494-12|CAB04054.3| 199|Caenorhabditis elegans Hypothetical
protein F02E9.5a protein.
Length = 199
Score = 41.1 bits (92), Expect = 4e-04
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = -2
Query: 286 RNDIAKLKEKNQAKQSTQNNSCCQQALNPPCDVT--IDELASYFETLVHIPKKMSSMAEM 113
+ D+ L+ K++ C QA PP +DEL+ YF V + KMSS+AE
Sbjct: 137 KGDVESLRMCIFDKENILPKPCSVQAARPPSPEAEEVDELSEYFTHFVRVELKMSSLAES 196
Query: 112 MYI 104
MY+
Sbjct: 197 MYV 199
>AC006832-8|AAF40000.1| 465|Caenorhabditis elegans Hypothetical
protein ZK355.6 protein.
Length = 465
Score = 29.5 bits (63), Expect = 1.4
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = -2
Query: 463 DNNDISKKCSLPPENNETLNSDPLNLCTLVQNCNQLKISSESNE 332
+ + +SK+C+ ENNE LN+ + +Q LK+S +
Sbjct: 135 ETDRLSKECAFRVENNEKLNASSVCQSWFLQGMYSLKVSGNRRD 178
>Z68218-4|CAA92474.1| 329|Caenorhabditis elegans Hypothetical
protein K01H12.4 protein.
Length = 329
Score = 28.7 bits (61), Expect = 2.5
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = -2
Query: 328 PTKSTHSDSSTKWWRNDIAKLKEKNQAKQSTQNNSCCQQALNPP 197
P + SD K W + K K+KN K S + C A PP
Sbjct: 232 PMEFVSSDGRVKLWLQPLEKQKKKNSEK-SKKRERCIDDAPIPP 274
>Z68131-2|CAA92218.1| 614|Caenorhabditis elegans Hypothetical
protein B0395.3 protein.
Length = 614
Score = 28.7 bits (61), Expect = 2.5
Identities = 22/81 (27%), Positives = 34/81 (41%), Gaps = 7/81 (8%)
Frame = -2
Query: 406 NSDPLNLCTLVQNCNQLKISSESNEP-PTKSTHSDSSTKWWRNDIAKLKEKNQAKQSTQN 230
N PL++ + Q ++ S++ P P SDS KW N + LK+ N +S +
Sbjct: 205 NEQPLSIFAITQQLAKVVSESQTPNPHPVGIVSSDSRDKW-ANVYSSLKKDNNNAKSLEA 263
Query: 229 NS------CCQQALNPPCDVT 185
C +A PP T
Sbjct: 264 VEKSLFVVCLDKASEPPVGYT 284
>AF106582-7|ABD94096.1| 806|Caenorhabditis elegans Hypothetical
protein W05F2.4b protein.
Length = 806
Score = 27.9 bits (59), Expect = 4.4
Identities = 25/98 (25%), Positives = 38/98 (38%), Gaps = 7/98 (7%)
Frame = -2
Query: 454 DISKKCSLPPENNETLNSDPLN----LCTLVQNCNQLKISSESNEPPTKSTHSDSSTKWW 287
D+ K+C +NN N+ P + + + L SS S P S S +K
Sbjct: 53 DLKKECDPDDKNNNDENNKPFDPPPTFVAVKKKPTPLATSSASTTAPAAKIASASDSKKP 112
Query: 286 RNDIAKLKEKNQAKQSTQNNS---CCQQALNPPCDVTI 182
+ + + K +Q T S QQA P +V I
Sbjct: 113 ASSSSTISVKPTVRQKTSETSKSKPLQQAPPSPVEVVI 150
>AF106582-6|ABD94095.1| 834|Caenorhabditis elegans Hypothetical
protein W05F2.4a protein.
Length = 834
Score = 27.9 bits (59), Expect = 4.4
Identities = 25/98 (25%), Positives = 38/98 (38%), Gaps = 7/98 (7%)
Frame = -2
Query: 454 DISKKCSLPPENNETLNSDPLN----LCTLVQNCNQLKISSESNEPPTKSTHSDSSTKWW 287
D+ K+C +NN N+ P + + + L SS S P S S +K
Sbjct: 81 DLKKECDPDDKNNNDENNKPFDPPPTFVAVKKKPTPLATSSASTTAPAAKIASASDSKKP 140
Query: 286 RNDIAKLKEKNQAKQSTQNNS---CCQQALNPPCDVTI 182
+ + + K +Q T S QQA P +V I
Sbjct: 141 ASSSSTISVKPTVRQKTSETSKSKPLQQAPPSPVEVVI 178
>AC090999-11|ABD63207.1| 356|Caenorhabditis elegans Hypothetical
protein Y82E9BR.4 protein.
Length = 356
Score = 27.9 bits (59), Expect = 4.4
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = -2
Query: 361 QLKISSESNEPPTKSTHSDSSTKWWRNDIAKLKEKNQAKQSTQNNSCCQQALNPPCDVTI 182
Q+K ++ E PT + K ND+ L+E ++ +N S A+N D I
Sbjct: 3 QIKYRRKNREKPTNLARERENIK---NDVTHLRETSRVLMLCRNVSAQFCAINETVDGII 59
Query: 181 DEL 173
D+L
Sbjct: 60 DKL 62
>AF039045-8|AAB94199.1| 300|Caenorhabditis elegans Hypothetical
protein F15E11.2 protein.
Length = 300
Score = 27.5 bits (58), Expect = 5.8
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = -2
Query: 223 CCQQALNPPCDVTIDELASYFETLVHI 143
C A+N CD++ D+L + F+ + H+
Sbjct: 64 CADIAINSRCDLSEDQLVATFQNMKHL 90
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,115,004
Number of Sequences: 27780
Number of extensions: 237735
Number of successful extensions: 832
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 804
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 831
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 956602620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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