Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0610
         (500 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    26   0.25 
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          24   0.77 
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   4.1  
AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    21   5.5  
DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.              21   9.5  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    21   9.5  

>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 25.8 bits (54), Expect = 0.25
 Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 5/74 (6%)
 Frame = -2

Query: 451 ISKKCSLPPENNETLNSDPLNLCTLVQNCNQLKISSESNEPPTKSTHSDSS-----TKWW 287
           I +  S  P N+E + +D       +  C  L  ++ S+E  + +TH         T+ +
Sbjct: 187 IVRSLSKSPPNDEGIETDSDRRKGSIARCWSLDSTAASDEDISLTTHQQKRHKLRVTRCY 246

Query: 286 RNDIAKLKEKNQAK 245
            +D A L +++Q K
Sbjct: 247 SSDSAVLSDEDQTK 260


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 24.2 bits (50), Expect = 0.77
 Identities = 16/51 (31%), Positives = 24/51 (47%)
 Frame = -2

Query: 400 DPLNLCTLVQNCNQLKISSESNEPPTKSTHSDSSTKWWRNDIAKLKEKNQA 248
           DP +  T +QNC+ +KI  E+      S   D  +    +D A +  KN A
Sbjct: 315 DPDHHSTDIQNCDSVKIKFETLHTMDSSDTIDIDSH--MSDRASVSSKNAA 363


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 15/44 (34%), Positives = 22/44 (50%)
 Frame = -2

Query: 463 DNNDISKKCSLPPENNETLNSDPLNLCTLVQNCNQLKISSESNE 332
           ++N I    SL   + E L  D LNL T + + +    SSE N+
Sbjct: 343 NSNQIVSDNSLS-SSEEKLKQDILNLRTDISSSSSSISSSEEND 385


>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = +2

Query: 221 T*IILGALFCLVFLF*LSNIISPPFCATITMR*F 322
           T I+LG++  ++  F     I    C TIT   F
Sbjct: 54  TLIVLGSIIFVISFFGCCGAIRESHCMTITFASF 87


>DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.
          Length = 143

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -2

Query: 496 KEPVLKILQCCDNNDISKKC 437
           KE  ++++  C N D S KC
Sbjct: 103 KEIGVEMIDSCSNVDSSDKC 122


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 9/42 (21%), Positives = 21/42 (50%)
 Frame = -2

Query: 373 QNCNQLKISSESNEPPTKSTHSDSSTKWWRNDIAKLKEKNQA 248
           +  NQL+I S++++        +      RND+ + + K ++
Sbjct: 73  EKLNQLEIESDNSKEVNDKKEENFIVDRLRNDLFECENKEKS 114


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,005
Number of Sequences: 438
Number of extensions: 3077
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13741392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)