BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= an--0610 (500 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At3g57380.1 68416.m06387 expressed protein contains Pfam domain,... 29 1.8 At1g23710.1 68414.m02993 expressed protein 28 3.1 At5g55920.1 68418.m06975 nucleolar protein, putative similar to ... 28 4.1 At1g70950.1 68414.m08185 expressed protein 28 4.1 At1g28280.1 68414.m03471 VQ motif-containing protein contains PF... 28 4.1 At5g48520.1 68418.m05999 expressed protein similar to unknown pr... 27 5.4 At5g58140.4 68418.m07274 protein kinase family protein / non pho... 27 7.1 At5g58140.3 68418.m07277 protein kinase family protein / non pho... 27 7.1 At5g58140.2 68418.m07276 protein kinase family protein / non pho... 27 7.1 At5g58140.1 68418.m07275 protein kinase family protein / non pho... 27 7.1 At5g43560.2 68418.m05326 meprin and TRAF homology domain-contain... 27 7.1 At5g43560.1 68418.m05325 meprin and TRAF homology domain-contain... 27 7.1 At4g34900.1 68417.m04949 xanthine dehydrogenase, putative simila... 27 7.1 At2g07070.1 68415.m00807 AT hook motif-containing protein contai... 27 7.1 At4g11900.1 68417.m01893 S-locus lectin protein kinase family pr... 27 9.4 At3g06540.1 68416.m00758 GDP dissociation inhibitor family prote... 27 9.4 At2g33670.1 68415.m04126 seven transmembrane MLO family protein ... 27 9.4 >At3g57380.1 68416.m06387 expressed protein contains Pfam domain, PF04577: Protein of unknown function (DUF563) Length = 504 Score = 29.1 bits (62), Expect = 1.8 Identities = 14/47 (29%), Positives = 24/47 (51%) Frame = -2 Query: 295 KWWRNDIAKLKEKNQAKQSTQNNSCCQQALNPPCDVTIDELASYFET 155 KW + + ++E N + +NNS ++N CDV + A +F T Sbjct: 144 KWETSVMQTVQELNLVYRDEENNSLVVSSVNDICDVFYNVPAVFFST 190 >At1g23710.1 68414.m02993 expressed protein Length = 295 Score = 28.3 bits (60), Expect = 3.1 Identities = 13/43 (30%), Positives = 25/43 (58%) Frame = -2 Query: 352 ISSESNEPPTKSTHSDSSTKWWRNDIAKLKEKNQAKQSTQNNS 224 +++ +++ T+S+ S SST ND + EK + K+ T +S Sbjct: 199 LNNSNDKTRTRSSSSSSSTAAEENDKKVITEKKKGKEKTSTSS 241 >At5g55920.1 68418.m06975 nucleolar protein, putative similar to SP|P46087 Proliferating-cell nucleolar antigen p120 (Proliferation-associated nucleolar protein p120) {Homo sapiens}, SP|P40991 Nucleolar protein NOP2 {Saccharomyces cerevisiae}; contains Pfam profile PF01189: NOL1/NOP2/sun family Length = 682 Score = 27.9 bits (59), Expect = 4.1 Identities = 11/35 (31%), Positives = 20/35 (57%) Frame = -2 Query: 355 KISSESNEPPTKSTHSDSSTKWWRNDIAKLKEKNQ 251 K SE+ E P+K + W+N+IA+ +E+ + Sbjct: 637 KSKSENVEEPSKPRKQKKKRREWKNEIAQAREEKR 671 >At1g70950.1 68414.m08185 expressed protein Length = 478 Score = 27.9 bits (59), Expect = 4.1 Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 4/73 (5%) Frame = -2 Query: 352 ISSESNEPPTKSTHSDSSTKWWRNDIAKLKEKNQAKQ----STQNNSCCQQALNPPCDVT 185 + SNEP ++ H+ S + +R+D + ++ +Q+ S + C Q D Sbjct: 88 VHQTSNEPDDEAVHATESFEDYRSDGSFSEDTSQSNSVCNYSHEQEKCGQGKSQCEFDEE 147 Query: 184 IDELASYFETLVH 146 D SY E LV+ Sbjct: 148 SDHCVSYDEILVN 160 >At1g28280.1 68414.m03471 VQ motif-containing protein contains PF05678: VQ motif Length = 247 Score = 27.9 bits (59), Expect = 4.1 Identities = 15/38 (39%), Positives = 17/38 (44%) Frame = -2 Query: 427 PENNETLNSDPLNLCTLVQNCNQLKISSESNEPPTKST 314 P E N P C N + SSESN+PPT T Sbjct: 5 PRYREATNLIPSPRCHNSNNSCGMSSSSESNKPPTTPT 42 >At5g48520.1 68418.m05999 expressed protein similar to unknown protein (gb|AAB97010.1) Length = 671 Score = 27.5 bits (58), Expect = 5.4 Identities = 14/37 (37%), Positives = 19/37 (51%) Frame = -2 Query: 436 SLPPENNETLNSDPLNLCTLVQNCNQLKISSESNEPP 326 SLP + N +N LCT +QN QL +S + P Sbjct: 557 SLPDDRNRCINE----LCTHIQNLQQLLFASSTTAQP 589 >At5g58140.4 68418.m07274 protein kinase family protein / non phototropic hypocotyl 1-like protein (NPL1) contains Pfam domains, PF00069: Protein kinase domain and PF00785: PAC motif; similar to SP:O48963 Nonphototropic hypocotyl protein 1 (Phototropin) [Mouse-ear cress] {Arabidopsis thaliana}; identical to cDNA non phototropic hypocotyl 1-like (NPL1) GI:5391441 Length = 689 Score = 27.1 bits (57), Expect = 7.1 Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%) Frame = -2 Query: 349 SSESNEPPTKSTHSDSSTKWWR-NDIAKLKEK 257 +S S++PP + SS+KW D AK+ E+ Sbjct: 38 TSSSSKPPLDGNNKGSSSKWMEFQDSAKITER 69 >At5g58140.3 68418.m07277 protein kinase family protein / non phototropic hypocotyl 1-like protein (NPL1) contains Pfam domains, PF00069: Protein kinase domain and PF00785: PAC motif; similar to SP:O48963 Nonphototropic hypocotyl protein 1 (Phototropin) [Mouse-ear cress] {Arabidopsis thaliana}; identical to cDNA non phototropic hypocotyl 1-like (NPL1) GI:5391441 Length = 915 Score = 27.1 bits (57), Expect = 7.1 Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%) Frame = -2 Query: 349 SSESNEPPTKSTHSDSSTKWWR-NDIAKLKEK 257 +S S++PP + SS+KW D AK+ E+ Sbjct: 38 TSSSSKPPLDGNNKGSSSKWMEFQDSAKITER 69 >At5g58140.2 68418.m07276 protein kinase family protein / non phototropic hypocotyl 1-like protein (NPL1) contains Pfam domains, PF00069: Protein kinase domain and PF00785: PAC motif; similar to SP:O48963 Nonphototropic hypocotyl protein 1 (Phototropin) [Mouse-ear cress] {Arabidopsis thaliana}; identical to cDNA non phototropic hypocotyl 1-like (NPL1) GI:5391441 Length = 915 Score = 27.1 bits (57), Expect = 7.1 Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%) Frame = -2 Query: 349 SSESNEPPTKSTHSDSSTKWWR-NDIAKLKEK 257 +S S++PP + SS+KW D AK+ E+ Sbjct: 38 TSSSSKPPLDGNNKGSSSKWMEFQDSAKITER 69 >At5g58140.1 68418.m07275 protein kinase family protein / non phototropic hypocotyl 1-like protein (NPL1) contains Pfam domains, PF00069: Protein kinase domain and PF00785: PAC motif; similar to SP:O48963 Nonphototropic hypocotyl protein 1 (Phototropin) [Mouse-ear cress] {Arabidopsis thaliana}; identical to cDNA non phototropic hypocotyl 1-like (NPL1) GI:5391441 Length = 915 Score = 27.1 bits (57), Expect = 7.1 Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%) Frame = -2 Query: 349 SSESNEPPTKSTHSDSSTKWWR-NDIAKLKEK 257 +S S++PP + SS+KW D AK+ E+ Sbjct: 38 TSSSSKPPLDGNNKGSSSKWMEFQDSAKITER 69 >At5g43560.2 68418.m05326 meprin and TRAF homology domain-containing protein / MATH domain-containing protein weak similarity to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471; contains Pfam profile PF00917: MATH domain Length = 1055 Score = 27.1 bits (57), Expect = 7.1 Identities = 9/21 (42%), Positives = 15/21 (71%) Frame = -2 Query: 340 SNEPPTKSTHSDSSTKWWRND 278 SN+ P KS HSD+ ++W+ + Sbjct: 140 SNKDPKKSKHSDTLHRFWKKE 160 >At5g43560.1 68418.m05325 meprin and TRAF homology domain-containing protein / MATH domain-containing protein weak similarity to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471; contains Pfam profile PF00917: MATH domain Length = 1055 Score = 27.1 bits (57), Expect = 7.1 Identities = 9/21 (42%), Positives = 15/21 (71%) Frame = -2 Query: 340 SNEPPTKSTHSDSSTKWWRND 278 SN+ P KS HSD+ ++W+ + Sbjct: 140 SNKDPKKSKHSDTLHRFWKKE 160 >At4g34900.1 68417.m04949 xanthine dehydrogenase, putative similar to xanthine dehydrogenase from Gallus gallus, PIR:XOCHDH [SP|P47990], from Calliphora vicina [SP|P08793]; contains Pfam profile PF02738 Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding domain Length = 1364 Score = 27.1 bits (57), Expect = 7.1 Identities = 16/63 (25%), Positives = 29/63 (46%) Frame = -2 Query: 445 KKCSLPPENNETLNSDPLNLCTLVQNCNQLKISSESNEPPTKSTHSDSSTKWWRNDIAKL 266 K+ + E + T L CTL Q +LK+SS + ++ +S +W + +A + Sbjct: 974 KEMNFQVEGSITHYFQSLQHCTLHQLWKELKVSSNFLKTRREADEFNSHNRWKKRGVAMV 1033 Query: 265 KEK 257 K Sbjct: 1034 PTK 1036 >At2g07070.1 68415.m00807 AT hook motif-containing protein contains Pfam profile PF02178: AT hook motif Length = 501 Score = 27.1 bits (57), Expect = 7.1 Identities = 17/38 (44%), Positives = 22/38 (57%) Frame = -2 Query: 394 LNLCTLVQNCNQLKISSESNEPPTKSTHSDSSTKWWRN 281 L L +++C L SSE ++PPT STHS S RN Sbjct: 96 LRLSHDIKDCPGLISSSEKSKPPT-STHSRGSGGVSRN 132 >At4g11900.1 68417.m01893 S-locus lectin protein kinase family protein contains Pfam domains, PF00954: S-locus glycoprotein family, PF00069: Protein kinase domain, and PF01453: Lectin (probable mannose binding) Length = 849 Score = 26.6 bits (56), Expect = 9.4 Identities = 10/26 (38%), Positives = 14/26 (53%) Frame = -2 Query: 403 SDPLNLCTLVQNCNQLKISSESNEPP 326 S P N C + +C I +E+ EPP Sbjct: 309 SQPDNRCDVYNSCGSFGICNENREPP 334 >At3g06540.1 68416.m00758 GDP dissociation inhibitor family protein / Rab GTPase activator family protein similar to SP|P26374 Rab proteins geranylgeranyltransferase component A 2 (Rab escort protein 2) {Homo sapiens}; contains Pfam profile PF00996: GDP dissociation inhibitor Length = 563 Score = 26.6 bits (56), Expect = 9.4 Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%) Frame = +3 Query: 375 TNVHKF-NGSLFNVSLFSGGRLHFFDISLLSQHCRIFN 485 +N H F + L N SL+S + F+ +L +H R FN Sbjct: 84 SNNHDFISVDLVNRSLYSSVEISSFESEILEEHSRRFN 121 >At2g33670.1 68415.m04126 seven transmembrane MLO family protein / MLO-like protein 5 (MLO5) identical to MLO-like protein 5 (AtMlo5) [Arabidopsis thaliana] SWISS-PROT:O22815; similar to MLO protein SWISS-PROT:P93766, NCBI_gi:1877221 [Hordeum vulgare][Barley] Length = 501 Score = 26.6 bits (56), Expect = 9.4 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 2/38 (5%) Frame = +3 Query: 231 FWVLCFAW-FFSFSLAISFRHHFVLLSLCVDL-VGGSF 338 F + F W ++ F L F HHF L+ + V L VG F Sbjct: 370 FEITYFFWIWYEFGLRSCFHHHFALIIIRVALGVGVQF 407 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 10,184,425 Number of Sequences: 28952 Number of extensions: 209689 Number of successful extensions: 707 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 698 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 707 length of database: 12,070,560 effective HSP length: 76 effective length of database: 9,870,208 effective search space used: 888318720 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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