Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0610
(500 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g57380.1 68416.m06387 expressed protein contains Pfam domain,... 29 1.8
At1g23710.1 68414.m02993 expressed protein 28 3.1
At5g55920.1 68418.m06975 nucleolar protein, putative similar to ... 28 4.1
At1g70950.1 68414.m08185 expressed protein 28 4.1
At1g28280.1 68414.m03471 VQ motif-containing protein contains PF... 28 4.1
At5g48520.1 68418.m05999 expressed protein similar to unknown pr... 27 5.4
At5g58140.4 68418.m07274 protein kinase family protein / non pho... 27 7.1
At5g58140.3 68418.m07277 protein kinase family protein / non pho... 27 7.1
At5g58140.2 68418.m07276 protein kinase family protein / non pho... 27 7.1
At5g58140.1 68418.m07275 protein kinase family protein / non pho... 27 7.1
At5g43560.2 68418.m05326 meprin and TRAF homology domain-contain... 27 7.1
At5g43560.1 68418.m05325 meprin and TRAF homology domain-contain... 27 7.1
At4g34900.1 68417.m04949 xanthine dehydrogenase, putative simila... 27 7.1
At2g07070.1 68415.m00807 AT hook motif-containing protein contai... 27 7.1
At4g11900.1 68417.m01893 S-locus lectin protein kinase family pr... 27 9.4
At3g06540.1 68416.m00758 GDP dissociation inhibitor family prote... 27 9.4
At2g33670.1 68415.m04126 seven transmembrane MLO family protein ... 27 9.4
>At3g57380.1 68416.m06387 expressed protein contains Pfam domain,
PF04577: Protein of unknown function (DUF563)
Length = 504
Score = 29.1 bits (62), Expect = 1.8
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = -2
Query: 295 KWWRNDIAKLKEKNQAKQSTQNNSCCQQALNPPCDVTIDELASYFET 155
KW + + ++E N + +NNS ++N CDV + A +F T
Sbjct: 144 KWETSVMQTVQELNLVYRDEENNSLVVSSVNDICDVFYNVPAVFFST 190
>At1g23710.1 68414.m02993 expressed protein
Length = 295
Score = 28.3 bits (60), Expect = 3.1
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = -2
Query: 352 ISSESNEPPTKSTHSDSSTKWWRNDIAKLKEKNQAKQSTQNNS 224
+++ +++ T+S+ S SST ND + EK + K+ T +S
Sbjct: 199 LNNSNDKTRTRSSSSSSSTAAEENDKKVITEKKKGKEKTSTSS 241
>At5g55920.1 68418.m06975 nucleolar protein, putative similar to
SP|P46087 Proliferating-cell nucleolar antigen p120
(Proliferation-associated nucleolar protein p120) {Homo
sapiens}, SP|P40991 Nucleolar protein NOP2
{Saccharomyces cerevisiae}; contains Pfam profile
PF01189: NOL1/NOP2/sun family
Length = 682
Score = 27.9 bits (59), Expect = 4.1
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = -2
Query: 355 KISSESNEPPTKSTHSDSSTKWWRNDIAKLKEKNQ 251
K SE+ E P+K + W+N+IA+ +E+ +
Sbjct: 637 KSKSENVEEPSKPRKQKKKRREWKNEIAQAREEKR 671
>At1g70950.1 68414.m08185 expressed protein
Length = 478
Score = 27.9 bits (59), Expect = 4.1
Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 4/73 (5%)
Frame = -2
Query: 352 ISSESNEPPTKSTHSDSSTKWWRNDIAKLKEKNQAKQ----STQNNSCCQQALNPPCDVT 185
+ SNEP ++ H+ S + +R+D + ++ +Q+ S + C Q D
Sbjct: 88 VHQTSNEPDDEAVHATESFEDYRSDGSFSEDTSQSNSVCNYSHEQEKCGQGKSQCEFDEE 147
Query: 184 IDELASYFETLVH 146
D SY E LV+
Sbjct: 148 SDHCVSYDEILVN 160
>At1g28280.1 68414.m03471 VQ motif-containing protein contains
PF05678: VQ motif
Length = 247
Score = 27.9 bits (59), Expect = 4.1
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = -2
Query: 427 PENNETLNSDPLNLCTLVQNCNQLKISSESNEPPTKST 314
P E N P C N + SSESN+PPT T
Sbjct: 5 PRYREATNLIPSPRCHNSNNSCGMSSSSESNKPPTTPT 42
>At5g48520.1 68418.m05999 expressed protein similar to unknown
protein (gb|AAB97010.1)
Length = 671
Score = 27.5 bits (58), Expect = 5.4
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -2
Query: 436 SLPPENNETLNSDPLNLCTLVQNCNQLKISSESNEPP 326
SLP + N +N LCT +QN QL +S + P
Sbjct: 557 SLPDDRNRCINE----LCTHIQNLQQLLFASSTTAQP 589
>At5g58140.4 68418.m07274 protein kinase family protein / non
phototropic hypocotyl 1-like protein (NPL1) contains
Pfam domains, PF00069: Protein kinase domain and
PF00785: PAC motif; similar to SP:O48963 Nonphototropic
hypocotyl protein 1 (Phototropin) [Mouse-ear
cress] {Arabidopsis thaliana}; identical to cDNA non
phototropic hypocotyl 1-like (NPL1) GI:5391441
Length = 689
Score = 27.1 bits (57), Expect = 7.1
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = -2
Query: 349 SSESNEPPTKSTHSDSSTKWWR-NDIAKLKEK 257
+S S++PP + SS+KW D AK+ E+
Sbjct: 38 TSSSSKPPLDGNNKGSSSKWMEFQDSAKITER 69
>At5g58140.3 68418.m07277 protein kinase family protein / non
phototropic hypocotyl 1-like protein (NPL1) contains
Pfam domains, PF00069: Protein kinase domain and
PF00785: PAC motif; similar to SP:O48963 Nonphototropic
hypocotyl protein 1 (Phototropin) [Mouse-ear
cress] {Arabidopsis thaliana}; identical to cDNA non
phototropic hypocotyl 1-like (NPL1) GI:5391441
Length = 915
Score = 27.1 bits (57), Expect = 7.1
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = -2
Query: 349 SSESNEPPTKSTHSDSSTKWWR-NDIAKLKEK 257
+S S++PP + SS+KW D AK+ E+
Sbjct: 38 TSSSSKPPLDGNNKGSSSKWMEFQDSAKITER 69
>At5g58140.2 68418.m07276 protein kinase family protein / non
phototropic hypocotyl 1-like protein (NPL1) contains
Pfam domains, PF00069: Protein kinase domain and
PF00785: PAC motif; similar to SP:O48963 Nonphototropic
hypocotyl protein 1 (Phototropin) [Mouse-ear
cress] {Arabidopsis thaliana}; identical to cDNA non
phototropic hypocotyl 1-like (NPL1) GI:5391441
Length = 915
Score = 27.1 bits (57), Expect = 7.1
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = -2
Query: 349 SSESNEPPTKSTHSDSSTKWWR-NDIAKLKEK 257
+S S++PP + SS+KW D AK+ E+
Sbjct: 38 TSSSSKPPLDGNNKGSSSKWMEFQDSAKITER 69
>At5g58140.1 68418.m07275 protein kinase family protein / non
phototropic hypocotyl 1-like protein (NPL1) contains
Pfam domains, PF00069: Protein kinase domain and
PF00785: PAC motif; similar to SP:O48963 Nonphototropic
hypocotyl protein 1 (Phototropin) [Mouse-ear
cress] {Arabidopsis thaliana}; identical to cDNA non
phototropic hypocotyl 1-like (NPL1) GI:5391441
Length = 915
Score = 27.1 bits (57), Expect = 7.1
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = -2
Query: 349 SSESNEPPTKSTHSDSSTKWWR-NDIAKLKEK 257
+S S++PP + SS+KW D AK+ E+
Sbjct: 38 TSSSSKPPLDGNNKGSSSKWMEFQDSAKITER 69
>At5g43560.2 68418.m05326 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein weak similarity
to ubiquitin-specific protease 12 [Arabidopsis thaliana]
GI:11993471; contains Pfam profile PF00917: MATH domain
Length = 1055
Score = 27.1 bits (57), Expect = 7.1
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = -2
Query: 340 SNEPPTKSTHSDSSTKWWRND 278
SN+ P KS HSD+ ++W+ +
Sbjct: 140 SNKDPKKSKHSDTLHRFWKKE 160
>At5g43560.1 68418.m05325 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein weak similarity
to ubiquitin-specific protease 12 [Arabidopsis thaliana]
GI:11993471; contains Pfam profile PF00917: MATH domain
Length = 1055
Score = 27.1 bits (57), Expect = 7.1
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = -2
Query: 340 SNEPPTKSTHSDSSTKWWRND 278
SN+ P KS HSD+ ++W+ +
Sbjct: 140 SNKDPKKSKHSDTLHRFWKKE 160
>At4g34900.1 68417.m04949 xanthine dehydrogenase, putative similar to
xanthine dehydrogenase from Gallus gallus, PIR:XOCHDH
[SP|P47990], from Calliphora vicina [SP|P08793]; contains
Pfam profile PF02738 Aldehyde oxidase and xanthine
dehydrogenase, molybdopterin binding domain
Length = 1364
Score = 27.1 bits (57), Expect = 7.1
Identities = 16/63 (25%), Positives = 29/63 (46%)
Frame = -2
Query: 445 KKCSLPPENNETLNSDPLNLCTLVQNCNQLKISSESNEPPTKSTHSDSSTKWWRNDIAKL 266
K+ + E + T L CTL Q +LK+SS + ++ +S +W + +A +
Sbjct: 974 KEMNFQVEGSITHYFQSLQHCTLHQLWKELKVSSNFLKTRREADEFNSHNRWKKRGVAMV 1033
Query: 265 KEK 257
K
Sbjct: 1034 PTK 1036
>At2g07070.1 68415.m00807 AT hook motif-containing protein contains
Pfam profile PF02178: AT hook motif
Length = 501
Score = 27.1 bits (57), Expect = 7.1
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = -2
Query: 394 LNLCTLVQNCNQLKISSESNEPPTKSTHSDSSTKWWRN 281
L L +++C L SSE ++PPT STHS S RN
Sbjct: 96 LRLSHDIKDCPGLISSSEKSKPPT-STHSRGSGGVSRN 132
>At4g11900.1 68417.m01893 S-locus lectin protein kinase family
protein contains Pfam domains, PF00954: S-locus
glycoprotein family, PF00069: Protein kinase domain, and
PF01453: Lectin (probable mannose binding)
Length = 849
Score = 26.6 bits (56), Expect = 9.4
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -2
Query: 403 SDPLNLCTLVQNCNQLKISSESNEPP 326
S P N C + +C I +E+ EPP
Sbjct: 309 SQPDNRCDVYNSCGSFGICNENREPP 334
>At3g06540.1 68416.m00758 GDP dissociation inhibitor family protein
/ Rab GTPase activator family protein similar to
SP|P26374 Rab proteins geranylgeranyltransferase
component A 2 (Rab escort protein 2) {Homo sapiens};
contains Pfam profile PF00996: GDP dissociation
inhibitor
Length = 563
Score = 26.6 bits (56), Expect = 9.4
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +3
Query: 375 TNVHKF-NGSLFNVSLFSGGRLHFFDISLLSQHCRIFN 485
+N H F + L N SL+S + F+ +L +H R FN
Sbjct: 84 SNNHDFISVDLVNRSLYSSVEISSFESEILEEHSRRFN 121
>At2g33670.1 68415.m04126 seven transmembrane MLO family protein /
MLO-like protein 5 (MLO5) identical to MLO-like protein
5 (AtMlo5) [Arabidopsis thaliana] SWISS-PROT:O22815;
similar to MLO protein SWISS-PROT:P93766,
NCBI_gi:1877221 [Hordeum vulgare][Barley]
Length = 501
Score = 26.6 bits (56), Expect = 9.4
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +3
Query: 231 FWVLCFAW-FFSFSLAISFRHHFVLLSLCVDL-VGGSF 338
F + F W ++ F L F HHF L+ + V L VG F
Sbjct: 370 FEITYFFWIWYEFGLRSCFHHHFALIIIRVALGVGVQF 407
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,184,425
Number of Sequences: 28952
Number of extensions: 209689
Number of successful extensions: 707
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 707
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 888318720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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