Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0608
         (765 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    24   1.3  
AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.              22   5.4  
AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta...    22   5.4  
DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channe...    22   7.2  
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    21   9.5  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    21   9.5  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    21   9.5  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    21   9.5  

>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 13/42 (30%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
 Frame = -3

Query: 172 LWILLVVTMCRYIL--SSILTYV*TCIYHKK*KSCRCATHYY 53
           L+I+L +T+   ++  + ++  V TC+   + KS   AT+YY
Sbjct: 50  LYIVLPITVIYAVIFVTGLVGNVSTCVVIARNKSMHTATNYY 91


>AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.
          Length = 145

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = +1

Query: 496 DNFTILFVLSHLILFCIYILS 558
           +NF+I+F+ S  ++  I+I S
Sbjct: 3   ENFSIMFIHSIFLILIIFIYS 23


>AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta
           protein precursor protein.
          Length = 145

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = +1

Query: 496 DNFTILFVLSHLILFCIYILS 558
           +NF+I+F+ S  ++  I+I S
Sbjct: 3   ENFSIMFIHSIFLILIIFIYS 23


>DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channel
           protein.
          Length = 489

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -1

Query: 255 YVITRSIRNYFKDEKYKVISWESFVLYFCG 166
           Y IT  +  Y+KDE+    S E  VL   G
Sbjct: 82  YTITMYLNQYWKDERL-AFSQEEEVLTLSG 110


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +1

Query: 187 TFPRYYFVFLVLKIITY 237
           TFP  YF+FL    I Y
Sbjct: 469 TFPVAYFMFLTFFFIHY 485


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +1

Query: 187 TFPRYYFVFLVLKIITY 237
           TFP  YF+FL    I Y
Sbjct: 455 TFPVAYFMFLTFFFIHY 471


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +1

Query: 187 TFPRYYFVFLVLKIITY 237
           TFP  YF+FL    I Y
Sbjct: 489 TFPVAYFMFLTFFFIHY 505


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +1

Query: 187 TFPRYYFVFLVLKIITY 237
           TFP  YF+FL    I Y
Sbjct: 438 TFPVAYFMFLTFFFIHY 454


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,497
Number of Sequences: 438
Number of extensions: 2504
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23911269
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)