Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0605
         (462 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P85195 Cluster: Lipocalin-2; n=2; Obtectomera|Rep: Lipo...    44   0.001
UniRef50_O52057 Cluster: Sulfur globule protein CV1 precursor; n...    36   0.56 
UniRef50_A7SFM6 Cluster: Predicted protein; n=1; Nematostella ve...    31   9.2  

>UniRef50_P85195 Cluster: Lipocalin-2; n=2; Obtectomera|Rep:
           Lipocalin-2 - Lonomia obliqua (Moth)
          Length = 53

 Score = 44.4 bits (100), Expect = 0.001
 Identities = 19/31 (61%), Positives = 24/31 (77%)
 Frame = +2

Query: 179 EGHARAAEAVVQHNTEAVRQAAEASREIHET 271
           + HARA EA VQ+NT+A RQ AEA+R  HE+
Sbjct: 16  QDHARAVEAAVQYNTDATRQVAEANRAAHES 46


>UniRef50_O52057 Cluster: Sulfur globule protein CV1 precursor; n=1;
           Allochromatium vinosum|Rep: Sulfur globule protein CV1
           precursor - Chromatium vinosum (Allochromatium vinosum)
          Length = 127

 Score = 35.5 bits (78), Expect = 0.56
 Identities = 17/23 (73%), Positives = 17/23 (73%), Gaps = 1/23 (4%)
 Frame = +2

Query: 395 APYGIGAPYGIAAPYTAYGA-YG 460
           APYG GAPYG  APY  YGA YG
Sbjct: 76  APYGYGAPYGYGAPY-GYGAPYG 97



 Score = 35.5 bits (78), Expect = 0.56
 Identities = 17/23 (73%), Positives = 17/23 (73%), Gaps = 1/23 (4%)
 Frame = +2

Query: 395 APYGIGAPYGIAAPYTAYGA-YG 460
           APYG GAPYG  APY  YGA YG
Sbjct: 82  APYGYGAPYGYGAPY-GYGAPYG 103



 Score = 34.7 bits (76), Expect = 0.99
 Identities = 16/22 (72%), Positives = 16/22 (72%), Gaps = 2/22 (9%)
 Frame = +2

Query: 395 APYGIGAPYGIAAPYTA--YGA 454
           APYG GAPYG  APY A  YGA
Sbjct: 88  APYGYGAPYGYGAPYGAMPYGA 109


>UniRef50_A7SFM6 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 163

 Score = 31.5 bits (68), Expect = 9.2
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -1

Query: 261 ISREASAAWRTASVLCWTTASAARACPSLMAR 166
           + + + A W T S+ CW T S AR C + +AR
Sbjct: 82  LCKNSLARWCTDSLSCWCTNSLARWCTNSLAR 113


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 229,764,246
Number of Sequences: 1657284
Number of extensions: 2400726
Number of successful extensions: 10058
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9616
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10046
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 24771286585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)