Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0604
         (753 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    23   2.6  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    23   3.5  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    23   3.5  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    23   3.5  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    23   3.5  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    23   3.5  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    23   3.5  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           23   3.5  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    23   3.5  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    23   3.5  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    22   4.6  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   8.0  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   8.0  

>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +1

Query: 112 LAGNNAPANKVAQLFKRSRTYINRTT 189
           LAG ++P+N+  +   + RT+   TT
Sbjct: 259 LAGTSSPSNRFTRHLIQRRTHTRHTT 284


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +2

Query: 89  PTDLPEIFSPATMHPPIKSPSFSN 160
           P DL    +P    PP+ +PS SN
Sbjct: 113 PQDLSTNGAPPRSTPPLSTPSNSN 136


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +2

Query: 89  PTDLPEIFSPATMHPPIKSPSFSN 160
           P DL    +P    PP+ +PS SN
Sbjct: 113 PQDLSTNGAPPRSTPPLSTPSNSN 136


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +2

Query: 89  PTDLPEIFSPATMHPPIKSPSFSN 160
           P DL    +P    PP+ +PS SN
Sbjct: 113 PQDLSTNGAPPRSTPPLSTPSNSN 136


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +2

Query: 89  PTDLPEIFSPATMHPPIKSPSFSN 160
           P DL    +P    PP+ +PS SN
Sbjct: 113 PQDLSTNGAPPRSTPPLSTPSNSN 136


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +2

Query: 89  PTDLPEIFSPATMHPPIKSPSFSN 160
           P DL    +P    PP+ +PS SN
Sbjct: 113 PQDLSTNGAPPRSTPPLSTPSNSN 136


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +2

Query: 89  PTDLPEIFSPATMHPPIKSPSFSN 160
           P DL    +P    PP+ +PS SN
Sbjct: 69  PQDLSTNGAPPRSTPPLSTPSNSN 92


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +2

Query: 89  PTDLPEIFSPATMHPPIKSPSFSN 160
           P DL    +P    PP+ +PS SN
Sbjct: 113 PQDLSTNGAPPRSTPPLSTPSNSN 136


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +2

Query: 89  PTDLPEIFSPATMHPPIKSPSFSN 160
           P DL    +P    PP+ +PS SN
Sbjct: 113 PQDLSTNGAPPRSTPPLSTPSNSN 136


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +2

Query: 89  PTDLPEIFSPATMHPPIKSPSFSN 160
           P DL    +P    PP+ +PS SN
Sbjct: 113 PQDLSTNGAPPRSTPPLSTPSNSN 136


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +3

Query: 693 YK*VGVVCTLSHFVFYCIL 749
           Y  +G+V T+++FV + IL
Sbjct: 34  YSKIGIVQTVAYFVIFIIL 52


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 11/48 (22%), Positives = 25/48 (52%)
 Frame = -1

Query: 519 YLCNNIELLLIIWSTLIYSYRIHHSNLK*HYIHLF*LQCNVC*NSELS 376
           +LC     + I+W  L+   +++H  ++ +Y  L+  +  V  NS ++
Sbjct: 300 FLCLIPFRVFILWIILVPEEQVYHLEIEKYYNILYFCRIMVYLNSAIN 347


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 10/34 (29%), Positives = 19/34 (55%)
 Frame = +1

Query: 559 FQQHLNLNHS*IFILTSQTRKSQEFRYR*NTILA 660
           F+  +  ++S +F+ T++    Q +RYR   I A
Sbjct: 254 FKHFVGADNSTVFVPTARFTVEQGYRYRFRVINA 287


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,240
Number of Sequences: 336
Number of extensions: 3336
Number of successful extensions: 19
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20131186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)