Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0604
         (753 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-1139|AAF54523.3|  674|Drosophila melanogaster CG12592-P...    29   9.0  
AE014297-1138|AAN13466.1| 1420|Drosophila melanogaster CG12819-P...    29   9.0  
AE014297-1137|AAF54522.2| 1430|Drosophila melanogaster CG12819-P...    29   9.0  
AE014297-57|AAF52145.3|   97|Drosophila melanogaster CG14645-PA ...    29   9.0  

>AE014297-1139|AAF54523.3|  674|Drosophila melanogaster CG12592-PA
           protein.
          Length = 674

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 25/69 (36%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
 Frame = +2

Query: 8   NVELTAEKPSENERSSKIPQIQIYEVRPTDLP-EIFSPATMHPPIKSPSFSND--REPTS 178
           N E   +KP+EN +S K  Q +  E+   D P EI SP+T+   I S +       E  S
Sbjct: 280 NEESDKDKPAENGKSDKDKQAET-EMSDEDKPSEIKSPSTIKKSIISTADEEALLAELAS 338

Query: 179 TGLPFLEDM 205
           + L  LE M
Sbjct: 339 SDLSHLEKM 347


>AE014297-1138|AAN13466.1| 1420|Drosophila melanogaster CG12819-PA,
            isoform A protein.
          Length = 1420

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 25/69 (36%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
 Frame = +2

Query: 8    NVELTAEKPSENERSSKIPQIQIYEVRPTDLP-EIFSPATMHPPIKSPSFSND--REPTS 178
            N E   +KP+EN +S K  Q +  E+   D P EI SP+T+   I S +       E  S
Sbjct: 921  NEESDKDKPAENGKSDKDKQAET-EMSDEDKPSEIKSPSTIKKSIISTADEEALLAELAS 979

Query: 179  TGLPFLEDM 205
            + L  LE M
Sbjct: 980  SDLSHLEKM 988


>AE014297-1137|AAF54522.2| 1430|Drosophila melanogaster CG12819-PB,
            isoform B protein.
          Length = 1430

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 25/69 (36%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
 Frame = +2

Query: 8    NVELTAEKPSENERSSKIPQIQIYEVRPTDLP-EIFSPATMHPPIKSPSFSND--REPTS 178
            N E   +KP+EN +S K  Q +  E+   D P EI SP+T+   I S +       E  S
Sbjct: 931  NEESDKDKPAENGKSDKDKQAET-EMSDEDKPSEIKSPSTIKKSIISTADEEALLAELAS 989

Query: 179  TGLPFLEDM 205
            + L  LE M
Sbjct: 990  SDLSHLEKM 998


>AE014297-57|AAF52145.3|   97|Drosophila melanogaster CG14645-PA
           protein.
          Length = 97

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 12/36 (33%), Positives = 16/36 (44%)
 Frame = +3

Query: 351 NNWDSIIVWKALNFNKHYIVVKISVYSAILDYCDVC 458
           NNWD+   WK    NK  I +K    +  +D    C
Sbjct: 42  NNWDATSYWKCETLNKPAIEIKCPSETGFMDSLKNC 77


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,500,647
Number of Sequences: 53049
Number of extensions: 502947
Number of successful extensions: 1269
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1228
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1268
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3437745267
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)