Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0601
         (701 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8T107 Cluster: Putative uncharacterized protein Bmhig;...    35   1.7  
UniRef50_Q84K15 Cluster: Putative uncharacterized protein OSJNBa...    34   2.9  
UniRef50_A5C6N4 Cluster: Putative uncharacterized protein; n=1; ...    34   2.9  
UniRef50_A1UGE8 Cluster: AMP-dependent synthetase and ligase; n=...    33   5.1  

>UniRef50_Q8T107 Cluster: Putative uncharacterized protein Bmhig;
           n=1; Bombyx mori|Rep: Putative uncharacterized protein
           Bmhig - Bombyx mori (Silk moth)
          Length = 786

 Score = 35.1 bits (77), Expect = 1.7
 Identities = 22/36 (61%), Positives = 23/36 (63%)
 Frame = +1

Query: 235 NREHLLSTYFIRNIGTHLRDLKTGASLHTNAPDVLS 342
           NR  LLSTYFIRN          GASL+TNAPD LS
Sbjct: 386 NRGRLLSTYFIRN----------GASLNTNAPDDLS 411


>UniRef50_Q84K15 Cluster: Putative uncharacterized protein
           OSJNBa0037J17.9; n=1; Oryza sativa (japonica
           cultivar-group)|Rep: Putative uncharacterized protein
           OSJNBa0037J17.9 - Oryza sativa subsp. japonica (Rice)
          Length = 190

 Score = 34.3 bits (75), Expect = 2.9
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = +3

Query: 243 TSVKYVFH*KYWYPSAGFKNRCITTYECTG 332
           T V++VF  + W+PS G   RC  T EC G
Sbjct: 67  TDVRWVFGDEKWWPSYGGMQRCRVTLECAG 96


>UniRef50_A5C6N4 Cluster: Putative uncharacterized protein; n=1;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 941

 Score = 34.3 bits (75), Expect = 2.9
 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
 Frame = +2

Query: 272 ILVPICGI*KPVHHYIRMHRTSYPLGHDDFVYTRPST--LRVRHFLAGW 412
           ++ P  GI     HYIR   ++  + H +F Y R ST    +R+F AGW
Sbjct: 516 LIPPGVGIPSGCRHYIRPPLSTPDVSHPEFCYRRHSTQMFHIRNFDAGW 564


>UniRef50_A1UGE8 Cluster: AMP-dependent synthetase and ligase; n=7;
           Actinomycetales|Rep: AMP-dependent synthetase and ligase
           - Mycobacterium sp. (strain KMS)
          Length = 539

 Score = 33.5 bits (73), Expect = 5.1
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = +3

Query: 348 ATTTSCIPDRVLCALDTFWLGGILVTS 428
           A T S  P R+LCA+  FW+GG+L  +
Sbjct: 243 AVTGSAGPVRILCAMPFFWIGGLLAAT 269


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 712,462,022
Number of Sequences: 1657284
Number of extensions: 14559676
Number of successful extensions: 30071
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 29220
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30057
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55785129165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)