Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0601
         (701 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0816 + 6360526-6360802,6360902-6361117,6361231-6361379,636...    29   4.7  
01_06_1083 - 34403769-34403774,34403819-34403918,34404235-344043...    28   8.3  

>01_01_0816 +
           6360526-6360802,6360902-6361117,6361231-6361379,
           6361474-6361750,6362228-6362457
          Length = 382

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = -1

Query: 701 MITTENTSANISSLQSRQLCLEKFGSYIKYHNKKLIQPI 585
           +I T   SAN +  +S   CL +F    +YHN  L   +
Sbjct: 237 IILTLYASANATDYESGAGCLRRFNELARYHNAALFAAV 275


>01_06_1083 -
           34403769-34403774,34403819-34403918,34404235-34404318,
           34404427-34404506,34404614-34404707,34404796-34404887,
           34405335-34405425,34405617-34405719,34405919-34406008,
           34406154-34406235,34406434-34406481,34406601-34406897,
           34406992-34407078,34408047-34408247,34408329-34408533,
           34409362-34410152
          Length = 816

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 20/93 (21%), Positives = 35/93 (37%)
 Frame = +3

Query: 357 TSCIPDRVLCALDTFWLGGILVTSKGYAGFAERVREPTGSNQRKFV*CATFIFVIKSAFY 536
           +SC+P   L A D  W+   L+ +K   G+     E  G           F  ++  AF 
Sbjct: 111 SSCLPSAPLSAADRTWMDEYLLEAKQALGYPLAPSETLGDGDDDGCPARHFDVLLYLAFQ 170

Query: 537 LVSASTVRLQLSLLHSNRLNKFFVMIFYIRTEF 635
            +  S  R +   + S     +F+  + +   F
Sbjct: 171 HLDTSCERTRTRHVRSGHSRLWFLGQYVLELAF 203


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,584,296
Number of Sequences: 37544
Number of extensions: 384205
Number of successful extensions: 763
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 753
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 763
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1803843684
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)