Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0601
         (701 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-2|CAD29631.1|  208|Anopheles gambiae hypothetical prote...    25   3.0  
AJ439398-1|CAD28124.1|  208|Anopheles gambiae hypothetical prote...    25   3.0  
AJ439061-1|CAD27770.1|   89|Anopheles gambiae hypothetical prote...    25   3.0  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   7.0  
Y17702-1|CAA76822.2|  260|Anopheles gambiae putative gVAG protei...    23   9.3  

>AJ441131-2|CAD29631.1|  208|Anopheles gambiae hypothetical protein
           protein.
          Length = 208

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
 Frame = +1

Query: 235 NREHLLSTYFIRNIGTHLRDL--KTGASLHTNAPDVLSFRPRRLRVYPTE 378
           +REHL  + F+R  G+H +    K   + +T  P    + P     +PT+
Sbjct: 24  HREHLHESGFVRRQGSHAKSSVHKLCHARNTTQPRTRWYIPAFFAAHPTD 73


>AJ439398-1|CAD28124.1|  208|Anopheles gambiae hypothetical protein
           protein.
          Length = 208

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
 Frame = +1

Query: 235 NREHLLSTYFIRNIGTHLRDL--KTGASLHTNAPDVLSFRPRRLRVYPTE 378
           +REHL  + F+R  G+H +    K   + +T  P    + P     +PT+
Sbjct: 24  HREHLHESGFVRRQGSHAKSSVHKLCHAKNTTRPRTRWYIPAFFAAHPTD 73


>AJ439061-1|CAD27770.1|   89|Anopheles gambiae hypothetical protein
           protein.
          Length = 89

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
 Frame = +1

Query: 235 NREHLLSTYFIRNIGTHLRDL--KTGASLHTNAPDVLSFRPRRLRVYPTE 378
           +REHL  + F+R  G+H +    K   + +T  P    + P     +PT+
Sbjct: 24  HREHLHESGFVRRQGSHAKSSVHKLCHAKNTTRPRTRWYIPAFFAAHPTD 73


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -1

Query: 212  HRVTKKIWW*ASCEP 168
            HR+  K+WW  + +P
Sbjct: 1162 HRIQYKVWWFVTSQP 1176


>Y17702-1|CAA76822.2|  260|Anopheles gambiae putative gVAG protein
           precursor protein.
          Length = 260

 Score = 23.0 bits (47), Expect = 9.3
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +1

Query: 331 DVLSFRPRRLRVYPTEYSAR 390
           + L  RP  +R YP+ YS +
Sbjct: 160 EYLDARPEHVRKYPSSYSGK 179


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 750,644
Number of Sequences: 2352
Number of extensions: 15414
Number of successful extensions: 74
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 74
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71504505
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)