Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0601
         (701 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BX538061-1|CAD97992.1|  311|Homo sapiens hypothetical protein pr...    30   9.2  
BC034033-1|AAH34033.1|  409|Homo sapiens chromosome 9 open readi...    30   9.2  
AL158825-4|CAI12577.1|  409|Homo sapiens chromosome 9 open readi...    30   9.2  
AK098661-1|BAC05369.1|  277|Homo sapiens protein ( Homo sapiens ...    30   9.2  
AF005070-1|AAB61615.1|  348|Homo sapiens neural cell adhesion mo...    30   9.2  

>BX538061-1|CAD97992.1|  311|Homo sapiens hypothetical protein
           protein.
          Length = 311

 Score = 29.9 bits (64), Expect = 9.2
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = +1

Query: 154 LSTRVGSQEAYHQIFFVTRCYSFTVEVNREHLLSTYFIRNI 276
           L+  +  + +Y  I  V   Y F VEV +E +LSTY + ++
Sbjct: 253 LANELSIELSYEDIKNVVLQYGFKVEVEKESVLSTYTVNDL 293


>BC034033-1|AAH34033.1|  409|Homo sapiens chromosome 9 open reading
           frame 41 protein.
          Length = 409

 Score = 29.9 bits (64), Expect = 9.2
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = +1

Query: 154 LSTRVGSQEAYHQIFFVTRCYSFTVEVNREHLLSTYFIRNI 276
           L+  +  + +Y  I  V   Y F VEV +E +LSTY + ++
Sbjct: 351 LANELSIELSYEDIKNVVLQYGFKVEVEKESVLSTYTVNDL 391


>AL158825-4|CAI12577.1|  409|Homo sapiens chromosome 9 open reading
           frame 41 protein.
          Length = 409

 Score = 29.9 bits (64), Expect = 9.2
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = +1

Query: 154 LSTRVGSQEAYHQIFFVTRCYSFTVEVNREHLLSTYFIRNI 276
           L+  +  + +Y  I  V   Y F VEV +E +LSTY + ++
Sbjct: 351 LANELSIELSYEDIKNVVLQYGFKVEVEKESVLSTYTVNDL 391


>AK098661-1|BAC05369.1|  277|Homo sapiens protein ( Homo sapiens
           cDNA FLJ25795 fis, clone TST07031. ).
          Length = 277

 Score = 29.9 bits (64), Expect = 9.2
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = +1

Query: 154 LSTRVGSQEAYHQIFFVTRCYSFTVEVNREHLLSTYFIRNI 276
           L+  +  + +Y  I  V   Y F VEV +E +LSTY + ++
Sbjct: 219 LANELSIELSYEDIKNVVLQYGFKVEVEKESVLSTYTVNDL 259


>AF005070-1|AAB61615.1|  348|Homo sapiens neural cell adhesion
           molecule protein.
          Length = 348

 Score = 29.9 bits (64), Expect = 9.2
 Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
 Frame = +3

Query: 165 CGLTRSLPPDFFCYTMLFLHRGSQS*TS--VKYVFH*KYWYPSAGFKNRCITTYECTGRL 338
           C +  SLPP     T+++ H+G        V+++F    + P  G K     TY C GR+
Sbjct: 139 CDVVSSLPP-----TIIWKHKGRDVILKKDVRFIFLSNNYLPIPGIKKTDEGTYRCEGRI 193

Query: 339 I 341
           +
Sbjct: 194 L 194


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,065,598
Number of Sequences: 237096
Number of extensions: 2149018
Number of successful extensions: 3060
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2961
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3060
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8119219030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)