Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0600
         (380 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    20   9.6  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    20   9.6  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    20   9.6  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    20   9.6  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           20   9.6  

>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 19.8 bits (39), Expect = 9.6
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -3

Query: 303 FDNLYMQIINHIFSLNVS 250
           FDN    ++NH F+ ++S
Sbjct: 70  FDNSVTPMVNHDFTQHLS 87


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 19.8 bits (39), Expect = 9.6
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -3

Query: 303 FDNLYMQIINHIFSLNVS 250
           FDN    ++NH F+ ++S
Sbjct: 70  FDNSVTPMVNHDFTQHLS 87


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 19.8 bits (39), Expect = 9.6
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +2

Query: 62  YSIILYVNFSYL 97
           Y IIL+ +F+YL
Sbjct: 78  YLIILFADFAYL 89


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 19.8 bits (39), Expect = 9.6
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +2

Query: 62  YSIILYVNFSYL 97
           Y IIL+ +F+YL
Sbjct: 96  YLIILFADFAYL 107


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 19.8 bits (39), Expect = 9.6
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -3

Query: 303 FDNLYMQIINHIFSLNVS 250
           FDN    ++NH F+ ++S
Sbjct: 70  FDNSVTPMVNHDFTQHLS 87


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,664
Number of Sequences: 336
Number of extensions: 1196
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  7908675
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)