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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0599
         (596 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC1718.07c |zfs1|moc4|transcription factor Zfs1 |Schizosacchar...    98   1e-21
SPBC13E7.02 |cwf24||GCN5-related N acetyltransferase|Schizosacch...    34   0.018
SPAC227.08c |yth1||zinc finger protein Yth1|Schizosaccharomyces ...    34   0.018
SPAC16.04 |dus3||tRNA dihydrouridine synthase Dus3 |Schizosaccha...    31   0.097
SPCC1739.01 ||SPCC1906.05|zf-CCCH type zinc finger protein|Schiz...    29   0.52 
SPAC25B8.14 |mal2||kinetochore protein Mal2 |Schizosaccharomyces...    28   0.90 
SPBC16C6.07c |rpt1||19S proteasome regulatory subunit Rpt1|Schiz...    27   1.6  
SPAPB17E12.11 |||N-oligosaccharyltransferase gamma subunit |Schi...    27   2.7  
SPAPB1E7.05 |gde1||glycerophosphoryl diester phosphodiesterase G...    27   2.7  
SPBC337.12 |||human ZC3H3 homolog|Schizosaccharomyces pombe|chr ...    27   2.7  
SPAC3A11.02 |cps3|mug188|zinc finger protein Cps3|Schizosaccharo...    26   3.6  
SPCC613.09 |sen54||tRNA-splicing endonuclease subunit Sen54 |Sch...    26   4.8  

>SPBC1718.07c |zfs1|moc4|transcription factor Zfs1
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 404

 Score = 97.9 bits (233), Expect = 1e-21
 Identities = 38/70 (54%), Positives = 52/70 (74%)
 Frame = +2

Query: 185 YKTELCRPFEEAGVCKYGDKCQFAHGVRELRNLQRHPKYKTELCRTFHSVGFCPYGPRCH 364
           YKTE C+ ++ +G C+YG KCQFAHG +EL+   RHPKYK+E CR+F   G+CPYG RC 
Sbjct: 327 YKTEPCKNWQISGTCRYGSKCQFAHGNQELKEPPRHPKYKSERCRSFMMYGYCPYGLRCC 386

Query: 365 FVHNAEEARR 394
           F+H+   A++
Sbjct: 387 FLHDESNAQK 396


>SPBC13E7.02 |cwf24||GCN5-related N
           acetyltransferase|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 533

 Score = 33.9 bits (74), Expect = 0.018
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = +2

Query: 299 YKTELCRTFHSVGFCPYGPRCHFVHNAEE 385
           Y+ ++C+ +   G+C YG  C F+H  E+
Sbjct: 185 YQPDVCKDYKLTGYCGYGDTCKFLHMRED 213



 Score = 33.9 bits (74), Expect = 0.018
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = +2

Query: 185 YKTELCRPFEEAGVCKYGDKCQFAH 259
           Y+ ++C+ ++  G C YGD C+F H
Sbjct: 185 YQPDVCKDYKLTGYCGYGDTCKFLH 209


>SPAC227.08c |yth1||zinc finger protein Yth1|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 170

 Score = 33.9 bits (74), Expect = 0.018
 Identities = 17/58 (29%), Positives = 27/58 (46%)
 Frame = +2

Query: 200 CRPFEEAGVCKYGDKCQFAHGVRELRNLQRHPKYKTELCRTFHSVGFCPYGPRCHFVH 373
           C  + E G C  G++C + H           P  +  +C  ++++GFCP GP C   H
Sbjct: 82  CHFYAERGWCSNGEECLYLH---------LDPSKQVGVC-AWYNMGFCPLGPICRGKH 129



 Score = 31.9 bits (69), Expect = 0.073
 Identities = 16/51 (31%), Positives = 25/51 (49%)
 Frame = +2

Query: 221 GVCKYGDKCQFAHGVRELRNLQRHPKYKTELCRTFHSVGFCPYGPRCHFVH 373
           G+CK G++C F H      NL++ P      C  +   G+C  G  C ++H
Sbjct: 60  GLCKKGEQCDFLHEY----NLKKMPP-----CHFYAERGWCSNGEECLYLH 101


>SPAC16.04 |dus3||tRNA dihydrouridine synthase Dus3
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 617

 Score = 31.5 bits (68), Expect = 0.097
 Identities = 17/58 (29%), Positives = 24/58 (41%)
 Frame = +2

Query: 197 LCRPFEEAGVCKYGDKCQFAHGVRELRNLQRHPKYKTELCRTFHSVGFCPYGPRCHFV 370
           LC        C Y + C+F H V E     + P    + C  F   G CP G +C ++
Sbjct: 47  LCPAISIGNECPYKENCKFPHDV-EAYLATKAPDI-GDKCPIFERYGVCPAGFKCRWL 102



 Score = 26.6 bits (56), Expect = 2.7
 Identities = 11/31 (35%), Positives = 12/31 (38%)
 Frame = +2

Query: 290 HPKYKTELCRTFHSVGFCPYGPRCHFVHNAE 382
           H K    LC        CPY   C F H+ E
Sbjct: 40  HVKENNALCPAISIGNECPYKENCKFPHDVE 70


>SPCC1739.01 ||SPCC1906.05|zf-CCCH type zinc finger
           protein|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 547

 Score = 29.1 bits (62), Expect = 0.52
 Identities = 17/58 (29%), Positives = 25/58 (43%)
 Frame = +2

Query: 200 CRPFEEAGVCKYGDKCQFAHGVRELRNLQRHPKYKTELCRTFHSVGFCPYGPRCHFVH 373
           C+ F   G C  G+ C F+H +   R           +C+ F   G C +GP+C   H
Sbjct: 47  CKFFRN-GTCTAGENCPFSHSLETER----------PICKYFLK-GNCKFGPKCALSH 92



 Score = 27.1 bits (57), Expect = 2.1
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = +2

Query: 257 HGVRELRNLQRHPKYKTELCRTFHSVGFCPYGPRCHFVHNAEEAR 391
           +GV  ++NLQ  P      C+ F + G C  G  C F H+ E  R
Sbjct: 34  NGVSTVKNLQHVP------CKFFRN-GTCTAGENCPFSHSLETER 71



 Score = 25.4 bits (53), Expect = 6.3
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +2

Query: 197 LCRPFEEAGVCKYGDKCQFAHGVRELRNL 283
           +C+ F + G CK+G KC  +H +    NL
Sbjct: 73  ICKYFLK-GNCKFGPKCALSHALPGNTNL 100


>SPAC25B8.14 |mal2||kinetochore protein Mal2 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 303

 Score = 28.3 bits (60), Expect = 0.90
 Identities = 15/66 (22%), Positives = 30/66 (45%)
 Frame = +3

Query: 252 LLTASANYAIFSVILNTRRSCVALSIRLASVLMDRVAISCITQRKQDAENHRRQEVHWHR 431
           LL  + +  I    ++   SC  L I++  V+   +  S  + R   +  ++  + +W R
Sbjct: 213 LLQINKSLTIDGTNISANLSCTHLVIQIPKVIQATLVCSSESTRVVKSRIYQYSDENWKR 272

Query: 432 SHRADL 449
            HR +L
Sbjct: 273 DHRLEL 278


>SPBC16C6.07c |rpt1||19S proteasome regulatory subunit
           Rpt1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 438

 Score = 27.5 bits (58), Expect = 1.6
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -3

Query: 450 IDPPDESDANEPPGDDGSLRLASS 379
           +D  +E+D N PP D+G + L  S
Sbjct: 14  VDTEEENDKNPPPLDEGDIELLKS 37


>SPAPB17E12.11 |||N-oligosaccharyltransferase gamma subunit
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 309

 Score = 26.6 bits (56), Expect = 2.7
 Identities = 12/44 (27%), Positives = 20/44 (45%)
 Frame = +1

Query: 427 IALIGRIYGVVYERRVAIATLAAFSIDALLFTCDVATSTSHSFR 558
           I + GR++  +   +    T+A FS D+    CDV       F+
Sbjct: 33  IQITGRLFHRIVNGKQDFTTVALFSADSSTMNCDVCRLIEPEFK 76


>SPAPB1E7.05 |gde1||glycerophosphoryl diester phosphodiesterase
           Gde1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1076

 Score = 26.6 bits (56), Expect = 2.7
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = +3

Query: 237 GINANLLTASANYAIFSVILNTRRSCVALSIRLAS 341
           G N N + AS+N A+ + +   R  CV + ++L +
Sbjct: 357 GFNPNEVDASSNTALHTAVRYNRPECVKMLLKLGA 391


>SPBC337.12 |||human ZC3H3 homolog|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 377

 Score = 26.6 bits (56), Expect = 2.7
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +2

Query: 314 CRTFHSVGFCPYGPRCHFVH 373
           CR +++ G C  G  C FVH
Sbjct: 209 CRYYNANGICGKGAACRFVH 228



 Score = 25.0 bits (52), Expect = 8.4
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +2

Query: 200 CRPFEEAGVCKYGDKCQFAH 259
           CR +   G+C  G  C+F H
Sbjct: 209 CRYYNANGICGKGAACRFVH 228


>SPAC3A11.02 |cps3|mug188|zinc finger protein
           Cps3|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 583

 Score = 26.2 bits (55), Expect = 3.6
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = +2

Query: 197 LCRPFEEAGVCKYGDKCQFAHGVRELRNLQ 286
           +C+ F++ G CK+G KC   H + + R ++
Sbjct: 69  ICKYFQK-GNCKFGSKCALEHVLPDGRKVK 97


>SPCC613.09 |sen54||tRNA-splicing endonuclease subunit Sen54
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 384

 Score = 25.8 bits (54), Expect = 4.8
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = -1

Query: 221 PLLQTVGRARSCSDLWLVAEEPVH 150
           PL +T+G A S + +WL+ EE ++
Sbjct: 103 PLFKTMGTADSQNRMWLLPEETLY 126


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,241,422
Number of Sequences: 5004
Number of extensions: 40274
Number of successful extensions: 180
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 156
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 174
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 260219058
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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