BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0599
(596 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ230894-1|ABD94313.1| 315|Anopheles gambiae zinc finger protei... 36 8e-04
DQ230893-1|ABD94311.1| 315|Anopheles gambiae zinc finger protei... 36 8e-04
AF043439-1|AAC05664.1| 239|Anopheles gambiae putative pupal-spe... 27 0.61
AF043433-2|AAC05657.1| 239|Anopheles gambiae putative pupal-spe... 27 0.61
AF043441-1|AAC05666.1| 231|Anopheles gambiae putative pupal-spe... 26 1.1
AF043437-1|AAC05662.1| 239|Anopheles gambiae putative pupal-spe... 26 1.1
AY255856-1|AAP13482.1| 248|Anopheles gambiae glutathione transf... 24 3.2
AY578803-1|AAT07308.1| 474|Anopheles gambiae mothers against Dp... 23 5.7
AJ439353-11|CAD27933.1| 615|Anopheles gambiae 30E5.11 protein. 23 7.5
AY341235-1|AAR13799.1| 196|Anopheles gambiae transferrin-like p... 23 9.9
AY341234-1|AAR13798.1| 196|Anopheles gambiae transferrin-like p... 23 9.9
AY341233-1|AAR13797.1| 196|Anopheles gambiae transferrin-like p... 23 9.9
AY341232-1|AAR13796.1| 196|Anopheles gambiae transferrin-like p... 23 9.9
AB090823-1|BAC57921.1| 429|Anopheles gambiae gag-like protein p... 23 9.9
>DQ230894-1|ABD94313.1| 315|Anopheles gambiae zinc finger protein
183 protein.
Length = 315
Score = 36.3 bits (80), Expect = 8e-04
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +2
Query: 185 YKTELCRPFEEAGVCKYGDKCQFAH 259
Y+ ++C+ ++E G C +GD C+F H
Sbjct: 176 YQPDICKDYKETGYCGFGDSCKFLH 200
Score = 32.7 bits (71), Expect = 0.009
Identities = 8/29 (27%), Positives = 18/29 (62%)
Frame = +2
Query: 299 YKTELCRTFHSVGFCPYGPRCHFVHNAEE 385
Y+ ++C+ + G+C +G C F+H+ +
Sbjct: 176 YQPDICKDYKETGYCGFGDSCKFLHDRSD 204
>DQ230893-1|ABD94311.1| 315|Anopheles gambiae zinc finger protein
183 protein.
Length = 315
Score = 36.3 bits (80), Expect = 8e-04
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +2
Query: 185 YKTELCRPFEEAGVCKYGDKCQFAH 259
Y+ ++C+ ++E G C +GD C+F H
Sbjct: 176 YQPDICKDYKETGYCGFGDSCKFLH 200
Score = 32.7 bits (71), Expect = 0.009
Identities = 8/29 (27%), Positives = 18/29 (62%)
Frame = +2
Query: 299 YKTELCRTFHSVGFCPYGPRCHFVHNAEE 385
Y+ ++C+ + G+C +G C F+H+ +
Sbjct: 176 YQPDICKDYKETGYCGFGDSCKFLHDRSD 204
>AF043439-1|AAC05664.1| 239|Anopheles gambiae putative
pupal-specific cuticular proteinCP2b protein.
Length = 239
Score = 26.6 bits (56), Expect = 0.61
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 142 HHQ*TGSSATSHKSLQDRALPTV*RSGGL 228
HH GS ATSH ++Q A PT+ G +
Sbjct: 24 HH---GSIATSHSTIQHHAAPTIQHVGSV 49
>AF043433-2|AAC05657.1| 239|Anopheles gambiae putative
pupal-specific cuticular proteinprotein.
Length = 239
Score = 26.6 bits (56), Expect = 0.61
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 142 HHQ*TGSSATSHKSLQDRALPTV*RSGGL 228
HH GS ATSH ++Q A PT+ G +
Sbjct: 24 HH---GSIATSHSTIQHHAAPTIQHVGSV 49
>AF043441-1|AAC05666.1| 231|Anopheles gambiae putative
pupal-specific cuticular proteinCP2b protein.
Length = 231
Score = 25.8 bits (54), Expect = 1.1
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +1
Query: 157 GSSATSHKSLQDRALPTV*RSGGL 228
GS ATSH S+Q A P + G +
Sbjct: 26 GSIATSHSSIQHHAAPAIHHVGSI 49
>AF043437-1|AAC05662.1| 239|Anopheles gambiae putative
pupal-specific cuticular proteinCP2b protein.
Length = 239
Score = 25.8 bits (54), Expect = 1.1
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +1
Query: 142 HHQ*TGSSATSHKSLQDRALPTV*RSGGL 228
HH GS ATSH S+Q A P + G +
Sbjct: 24 HH---GSIATSHSSIQHHAAPAIHHVGSV 49
>AY255856-1|AAP13482.1| 248|Anopheles gambiae glutathione
transferase o1 protein.
Length = 248
Score = 24.2 bits (50), Expect = 3.2
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +2
Query: 326 HSVGFCPYGPRCHFVHNAEE 385
+S+ FCPY R H + +A++
Sbjct: 25 YSMRFCPYAQRVHLMLDAKK 44
Score = 22.6 bits (46), Expect = 9.9
Identities = 12/25 (48%), Positives = 13/25 (52%), Gaps = 2/25 (8%)
Frame = -3
Query: 423 NEPPG--DDGSLRLASSALCTKWQR 355
+ PP DDG LRL S C QR
Sbjct: 11 SSPPSLPDDGKLRLYSMRFCPYAQR 35
>AY578803-1|AAT07308.1| 474|Anopheles gambiae mothers against Dpp
protein.
Length = 474
Score = 23.4 bits (48), Expect = 5.7
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +2
Query: 479 SPRSPHSPLTPYSSPAMSPPAQ 544
+P+SP+ L PA SPP +
Sbjct: 226 NPQSPYGALPETPPPAYSPPEE 247
>AJ439353-11|CAD27933.1| 615|Anopheles gambiae 30E5.11 protein.
Length = 615
Score = 23.0 bits (47), Expect = 7.5
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +2
Query: 254 AHGVRELRNLQRHPKYKTELCRT 322
+HG R L + QR YK EL T
Sbjct: 233 SHGDRLLEDRQRFDNYKRELKET 255
>AY341235-1|AAR13799.1| 196|Anopheles gambiae transferrin-like
protein.
Length = 196
Score = 22.6 bits (46), Expect = 9.9
Identities = 12/21 (57%), Positives = 13/21 (61%), Gaps = 2/21 (9%)
Frame = -3
Query: 447 DPPDESDANEPP--GDDGSLR 391
D P E DA EPP G D +LR
Sbjct: 156 DSPLEDDAEEPPVEGIDPALR 176
>AY341234-1|AAR13798.1| 196|Anopheles gambiae transferrin-like
protein.
Length = 196
Score = 22.6 bits (46), Expect = 9.9
Identities = 12/21 (57%), Positives = 13/21 (61%), Gaps = 2/21 (9%)
Frame = -3
Query: 447 DPPDESDANEPP--GDDGSLR 391
D P E DA EPP G D +LR
Sbjct: 156 DSPLEDDAEEPPVEGIDPALR 176
>AY341233-1|AAR13797.1| 196|Anopheles gambiae transferrin-like
protein.
Length = 196
Score = 22.6 bits (46), Expect = 9.9
Identities = 12/21 (57%), Positives = 13/21 (61%), Gaps = 2/21 (9%)
Frame = -3
Query: 447 DPPDESDANEPP--GDDGSLR 391
D P E DA EPP G D +LR
Sbjct: 156 DSPLEDDAEEPPVEGIDPALR 176
>AY341232-1|AAR13796.1| 196|Anopheles gambiae transferrin-like
protein.
Length = 196
Score = 22.6 bits (46), Expect = 9.9
Identities = 12/21 (57%), Positives = 13/21 (61%), Gaps = 2/21 (9%)
Frame = -3
Query: 447 DPPDESDANEPP--GDDGSLR 391
D P E DA EPP G D +LR
Sbjct: 156 DSPLEDDAEEPPVEGIDPALR 176
>AB090823-1|BAC57921.1| 429|Anopheles gambiae gag-like protein
protein.
Length = 429
Score = 22.6 bits (46), Expect = 9.9
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +3
Query: 354 RVAISCITQRKQDAENHRRQEVHWHRSHRAD 446
+V I + Q + H+RQ+ H R H D
Sbjct: 169 QVVIGTQQECLQPEQQHQRQQQHTVRRHNVD 199
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 592,885
Number of Sequences: 2352
Number of extensions: 11489
Number of successful extensions: 124
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 119
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 124
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57609459
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -