Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0598
         (749 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0618 + 25565780-25566064,25566855-25567046,25567144-255674...    31   1.3  
02_05_0008 + 24934917-24935229,24936387-24936608,24936876-249375...    29   5.2  
04_04_0072 + 22524974-22525310,22526334-22526552,22526826-225275...    28   6.9  
02_04_0317 + 21996324-21996681,21996833-21996859,21997299-219982...    28   6.9  

>11_06_0618 +
           25565780-25566064,25566855-25567046,25567144-25567416,
           25567636-25567738,25568273-25568391,25568615-25568782,
           25568908-25569386,25569742-25569850,25569905-25570070,
           25571405-25571433
          Length = 640

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = +2

Query: 383 CVIFRKGPDSPQSTVTIASQIVSMNYMVRYLKRIIVLV 496
           CV   + P S  S + +A  ++  +YM RY+K ++ LV
Sbjct: 512 CVALYETPRSMYSKIRLARSMIRDHYMPRYIKDVLTLV 549


>02_05_0008 +
           24934917-24935229,24936387-24936608,24936876-24937591,
           24937646-24937728,24938448-24938514,24938833-24939228,
           24939276-24939318,24939380-24939474,24940287-24940314,
           24940636-24940754
          Length = 693

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -1

Query: 230 PWLWGSKYVWD 198
           PW WG KY WD
Sbjct: 373 PWTWGMKYFWD 383


>04_04_0072 +
           22524974-22525310,22526334-22526552,22526826-22527532,
           22527664-22528482
          Length = 693

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -1

Query: 230 PWLWGSKYVWD 198
           PW WG KY WD
Sbjct: 377 PWRWGMKYFWD 387


>02_04_0317 +
           21996324-21996681,21996833-21996859,21997299-21998227,
           21998317-21999162
          Length = 719

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -1

Query: 230 PWLWGSKYVWD 198
           PW WG KY WD
Sbjct: 394 PWRWGMKYFWD 404


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,620,083
Number of Sequences: 37544
Number of extensions: 301083
Number of successful extensions: 442
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 436
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 442
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1992480932
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)