Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0598
         (749 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U00067-9|AAK20073.1|  364|Caenorhabditis elegans Hypothetical pr...    31   0.66 
U50300-1|AAC48108.2|  349|Caenorhabditis elegans Serpentine rece...    29   3.5  
Z93383-7|CAB07621.1|  285|Caenorhabditis elegans Hypothetical pr...    28   8.1  

>U00067-9|AAK20073.1|  364|Caenorhabditis elegans Hypothetical
           protein F54E7.1a protein.
          Length = 364

 Score = 31.5 bits (68), Expect = 0.66
 Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
 Frame = -2

Query: 307 TRCVIHDT*SIEKYTQKLKKMLDPIH-LGFG-AQNTYGINSFLIGLALFSCYIG 152
           T   IH   S+    + +K+ ++PIH LGF  A+    +   L+ LA+F  YIG
Sbjct: 2   TAAQIHSDCSVHMLPRHVKEDVEPIHLLGFNIARKPKWLQFVLLSLAIFILYIG 55


>U50300-1|AAC48108.2|  349|Caenorhabditis elegans Serpentine
           receptor, class x protein3 protein.
          Length = 349

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
 Frame = -1

Query: 380 FSMVFLRVIPIKL---RLKWFRRLKIFYTMR-YTRYIVH*KIYAKTKKNA*PHS 231
           F  VFLRV+P+ L    ++WF  +  FYT+   +  I++  +  + +KN  P S
Sbjct: 239 FVWVFLRVLPVMLENRHVEWFILVPFFYTVNCSSAAIINIGLNNEVQKNLLPKS 292


>Z93383-7|CAB07621.1|  285|Caenorhabditis elegans Hypothetical
           protein F54B8.8 protein.
          Length = 285

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -2

Query: 691 NHDHR*KKYYFIMFIEPIYTLNYYII 614
           NH H+   Y F++FI  +  L+ Y++
Sbjct: 122 NHRHKLSNYIFLIFISSVVILDQYVL 147


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,031,491
Number of Sequences: 27780
Number of extensions: 328224
Number of successful extensions: 566
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 555
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 566
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)