BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= an--0597 (638 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value X59589-1|CAA42159.1| 395|Caenorhabditis elegans calreticulin pr... 251 4e-67 AF125963-7|AAD14746.1| 395|Caenorhabditis elegans Calreticulin ... 251 4e-67 Z22181-5|CAA80183.1| 619|Caenorhabditis elegans Hypothetical pr... 94 7e-20 Z83116-11|CAM84819.1| 278|Caenorhabditis elegans Hypothetical p... 31 0.53 U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical p... 30 1.2 AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin p... 30 1.2 U80033-2|AAM15608.1| 1009|Caenorhabditis elegans Hypothetical pr... 29 3.7 U64844-9|AAB18309.1| 330|Caenorhabditis elegans Serpentine rece... 28 4.9 Z66494-5|CAA91259.1| 473|Caenorhabditis elegans Hypothetical pr... 28 6.5 AY349016-1|AAQ55496.1| 394|Caenorhabditis elegans NHR-41 protein. 27 8.6 AY349015-1|AAQ55495.1| 459|Caenorhabditis elegans NHR-41B protein. 27 8.6 AY349014-1|AAQ55494.1| 583|Caenorhabditis elegans NHR-41A protein. 27 8.6 >X59589-1|CAA42159.1| 395|Caenorhabditis elegans calreticulin protein. Length = 395 Score = 251 bits (614), Expect = 4e-67 Identities = 112/189 (59%), Positives = 143/189 (75%), Gaps = 1/189 (0%) Frame = +3 Query: 72 INCDVFFEEKFPDDSWESNWVYSEHPGKEFGKFKLTAGKFFSDPEDDKGLKTSEDARFYA 251 ++ +V+F+E+F D SWE WV S+H +FG FKL+AGKFF D+G++TS+DA+FY+ Sbjct: 13 VSAEVYFKEEFNDASWEKRWVQSKHKD-DFGAFKLSAGKFFDVESRDQGIQTSQDAKFYS 71 Query: 252 LSRKF-KPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEIMFGPD 428 + KF K FSN+GK LV+Q+TVKHEQ IDCGGGY+KV + D HGETPY +MFGPD Sbjct: 72 RAAKFDKDFSNKGKTLVIQYTVKHEQGIDCGGGYVKVMRADADLGDFHGETPYNVMFGPD 131 Query: 429 ICGPGTKKVHVIFSYKGKNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGD 608 ICGP T++VHVI +YKG+N LIKK+I CK D THLYTLI+ DNTYEV ID E ++G Sbjct: 132 ICGP-TRRVHVILNYKGENKLIKKEITCKSDELTHLYTLILNSDNTYEVKIDGESAQTGS 190 Query: 609 LKADWDFLP 635 L+ DWD LP Sbjct: 191 LEEDWDLLP 199 >AF125963-7|AAD14746.1| 395|Caenorhabditis elegans Calreticulin protein 1 protein. Length = 395 Score = 251 bits (614), Expect = 4e-67 Identities = 112/189 (59%), Positives = 143/189 (75%), Gaps = 1/189 (0%) Frame = +3 Query: 72 INCDVFFEEKFPDDSWESNWVYSEHPGKEFGKFKLTAGKFFSDPEDDKGLKTSEDARFYA 251 ++ +V+F+E+F D SWE WV S+H +FG FKL+AGKFF D+G++TS+DA+FY+ Sbjct: 13 VSAEVYFKEEFNDASWEKRWVQSKHKD-DFGAFKLSAGKFFDVESRDQGIQTSQDAKFYS 71 Query: 252 LSRKF-KPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEIMFGPD 428 + KF K FSN+GK LV+Q+TVKHEQ IDCGGGY+KV + D HGETPY +MFGPD Sbjct: 72 RAAKFDKDFSNKGKTLVIQYTVKHEQGIDCGGGYVKVMRADADLGDFHGETPYNVMFGPD 131 Query: 429 ICGPGTKKVHVIFSYKGKNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGD 608 ICGP T++VHVI +YKG+N LIKK+I CK D THLYTLI+ DNTYEV ID E ++G Sbjct: 132 ICGP-TRRVHVILNYKGENKLIKKEITCKSDELTHLYTLILNSDNTYEVKIDGESAQTGS 190 Query: 609 LKADWDFLP 635 L+ DWD LP Sbjct: 191 LEEDWDLLP 199 >Z22181-5|CAA80183.1| 619|Caenorhabditis elegans Hypothetical protein ZK632.6 protein. Length = 619 Score = 94.3 bits (224), Expect = 7e-20 Identities = 55/152 (36%), Positives = 80/152 (52%), Gaps = 13/152 (8%) Frame = +3 Query: 204 EDDKGLKTSEDARFYALSRKFK-PFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFD--CKL 374 E D GL AR +A++ K PF+ + VVQ+ +K E+ +CGGGYLK+ + Sbjct: 107 EGDLGLIVKTKARHHAIAAKLNTPFAFDANTFVVQYDIKFEEGQECGGGYLKLLSEGAEK 166 Query: 375 EQKDMHGETPYEIMFGPDICGPGTKKVHVIFSYKGKNHLIKKDIRCK----------DDV 524 + + +T Y IMFGPD CG T KVH+IF YK + + DD Sbjct: 167 DLANFQDKTAYTIMFGPDKCG-ATGKVHLIFRYKNPINGTISEYHANQPTTIGSTYWDDH 225 Query: 525 YTHLYTLIVKPDNTYEVLIDNEKVESGDLKAD 620 THL+TL+VKP Y V +D + + G++ +D Sbjct: 226 NTHLFTLVVKPTGEYSVSVDGKSLYYGNMMSD 257 >Z83116-11|CAM84819.1| 278|Caenorhabditis elegans Hypothetical protein M01B2.12 protein. Length = 278 Score = 31.5 bits (68), Expect = 0.53 Identities = 16/57 (28%), Positives = 29/57 (50%) Frame = -1 Query: 491 EVVLTLVTEDYVYLLGSWTTDVRAEHNLIWSLSVHVLLLQFAVKDLEVSASTVNVLF 321 E+ + +V+ D+ LL W+ +VRAE L ++ L F +D + S + L+ Sbjct: 36 EIRIQMVSADFGILLAEWSKEVRAEFTSAELLELYKKCLNFVKEDNKPSMVEITQLY 92 >U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical protein K07E12.1a protein. Length = 13100 Score = 30.3 bits (65), Expect = 1.2 Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 1/42 (2%) Frame = +3 Query: 480 KNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEV-LIDNEKVES 602 K I+K++ C+D THL L D+TY V ++ NE+V++ Sbjct: 12856 KEKWIRKEVTCRDSFGTHLNEL--PSDHTYTVCVMTNERVDN 12895 >AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin protein. Length = 13100 Score = 30.3 bits (65), Expect = 1.2 Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 1/42 (2%) Frame = +3 Query: 480 KNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEV-LIDNEKVES 602 K I+K++ C+D THL L D+TY V ++ NE+V++ Sbjct: 12856 KEKWIRKEVTCRDSFGTHLNEL--PSDHTYTVCVMTNERVDN 12895 >U80033-2|AAM15608.1| 1009|Caenorhabditis elegans Hypothetical protein T23H2.3 protein. Length = 1009 Score = 28.7 bits (61), Expect = 3.7 Identities = 18/52 (34%), Positives = 26/52 (50%) Frame = -1 Query: 380 LLQFAVKDLEVSASTVNVLFMFDSELDDQGFTLITERFELTGESIEPRIFRG 225 L + ++K+LE + L F S L D G + + E+T E IE RI G Sbjct: 233 LQKLSIKELEANKDKKLKLLKFSSNLPDNGARVKLQVDEIT-EEIERRIING 283 >U64844-9|AAB18309.1| 330|Caenorhabditis elegans Serpentine receptor, class h protein212 protein. Length = 330 Score = 28.3 bits (60), Expect = 4.9 Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Frame = -1 Query: 590 LIVNEDFIGVVG---FHNQSVQMCVDIIFAADIFFDEVVLTLVTEDYVYLLGSWTT 432 LI+ ++GV FHNQ++ + II ++ FF +V+ + Y W T Sbjct: 255 LIIPIIYVGVTSLLYFHNQAINNFIVIIVSSHGFFSTIVMICIHVPYREFTLRWLT 310 >Z66494-5|CAA91259.1| 473|Caenorhabditis elegans Hypothetical protein C34C6.5a protein. Length = 473 Score = 27.9 bits (59), Expect = 6.5 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 2/52 (3%) Frame = +1 Query: 295 WSSSSLSNMNKTLTVEADTSRSLTANWSRRTCTERLHM--RLCSALTSVVQE 444 W SS L+ + T+ + T RS+ + S+ TCTE HM +C S +E Sbjct: 15 WYSSLLTIFSLTIKRKLKTIRSMQDSTSKCTCTEH-HMGGTICCCCRSDAEE 65 >AY349016-1|AAQ55496.1| 394|Caenorhabditis elegans NHR-41 protein. Length = 394 Score = 27.5 bits (58), Expect = 8.6 Identities = 22/82 (26%), Positives = 45/82 (54%), Gaps = 1/82 (1%) Frame = -2 Query: 310 VNWTTKGLPSLLNGLNLRERA*NLASSEVFKPLSSSGSLKNFPA-VNLNFPNSFPGCSLY 134 +++T + LPS + R +AS E+F+ +SSS S +N + ++N +S + Sbjct: 245 ISFTAQDLPSSMASPETRS-VNQMASQELFEYVSSSKSTQNHMSNEHINVDDSTSEDN-D 302 Query: 133 TQLLSHESSGNFSSKNTSQFIE 68 T + S +SS N +++ S+ ++ Sbjct: 303 THVTSQQSSVNIAAERFSRILQ 324 >AY349015-1|AAQ55495.1| 459|Caenorhabditis elegans NHR-41B protein. Length = 459 Score = 27.5 bits (58), Expect = 8.6 Identities = 22/82 (26%), Positives = 45/82 (54%), Gaps = 1/82 (1%) Frame = -2 Query: 310 VNWTTKGLPSLLNGLNLRERA*NLASSEVFKPLSSSGSLKNFPA-VNLNFPNSFPGCSLY 134 +++T + LPS + R +AS E+F+ +SSS S +N + ++N +S + Sbjct: 342 ISFTAQDLPSSMASPETRS-VNQMASQELFEYVSSSKSTQNHMSNEHINVDDSTSEDN-D 399 Query: 133 TQLLSHESSGNFSSKNTSQFIE 68 T + S +SS N +++ S+ ++ Sbjct: 400 THVTSQQSSVNIAAERFSRILQ 421 >AY349014-1|AAQ55494.1| 583|Caenorhabditis elegans NHR-41A protein. Length = 583 Score = 27.5 bits (58), Expect = 8.6 Identities = 22/82 (26%), Positives = 45/82 (54%), Gaps = 1/82 (1%) Frame = -2 Query: 310 VNWTTKGLPSLLNGLNLRERA*NLASSEVFKPLSSSGSLKNFPA-VNLNFPNSFPGCSLY 134 +++T + LPS + R +AS E+F+ +SSS S +N + ++N +S + Sbjct: 466 ISFTAQDLPSSMASPETRS-VNQMASQELFEYVSSSKSTQNHMSNEHINVDDSTSEDN-D 523 Query: 133 TQLLSHESSGNFSSKNTSQFIE 68 T + S +SS N +++ S+ ++ Sbjct: 524 THVTSQQSSVNIAAERFSRILQ 545 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,146,857 Number of Sequences: 27780 Number of extensions: 375956 Number of successful extensions: 1200 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 1096 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1181 length of database: 12,740,198 effective HSP length: 78 effective length of database: 10,573,358 effective search space used: 1416829972 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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