BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= an--0595 (422 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPAC22F3.02 |atf31||transcription factor Atf31|Schizosaccharomyc... 31 0.074 SPBC530.05 |||transcription factor |Schizosaccharomyces pombe|ch... 27 0.91 SPAC8C9.04 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 26 2.1 SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr 1|||M... 24 8.5 SPAC1F7.10 |||hydantoin racemase family |Schizosaccharomyces pom... 24 8.5 >SPAC22F3.02 |atf31||transcription factor Atf31|Schizosaccharomyces pombe|chr 1|||Manual Length = 209 Score = 31.1 bits (67), Expect = 0.074 Identities = 13/32 (40%), Positives = 23/32 (71%) Frame = +2 Query: 188 SAQDSRKRKKEYVDGLEDRVKQCTAENQTLIR 283 +AQ R +KK+Y+ L+D+V T+EN+ L++ Sbjct: 134 AAQKCRIKKKKYLQTLQDQVNYYTSENKELLQ 165 >SPBC530.05 |||transcription factor |Schizosaccharomyces pombe|chr 2|||Manual Length = 743 Score = 27.5 bits (58), Expect = 0.91 Identities = 10/28 (35%), Positives = 16/28 (57%) Frame = -1 Query: 383 TCSYCYHSHPLIRSVNVSTEHSATGSVT 300 +C H H L +++ V+ H TGS+T Sbjct: 467 SCLILIHRHSLTKNLQVNCVHRGTGSIT 494 >SPAC8C9.04 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||Manual Length = 647 Score = 26.2 bits (55), Expect = 2.1 Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 2/45 (4%) Frame = +1 Query: 88 LGEGG--HHATHQLSAHETRGTGAEEDQTQNQEQDLSSGLEETQE 216 LG+GG H AT A + GA E+ Q ++DL ET E Sbjct: 333 LGQGGVTHEATTSARASASGIPGAFEEVQQTVQEDLPHPTAETVE 377 >SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr 1|||Manual Length = 468 Score = 24.2 bits (50), Expect = 8.5 Identities = 10/27 (37%), Positives = 13/27 (48%) Frame = +1 Query: 283 EDKNTAVTEPVAECSVETFTERIKGCE 363 E + A + E S+ FTE I CE Sbjct: 264 EKRRIAAQRKLEEASIPAFTEEILACE 290 >SPAC1F7.10 |||hydantoin racemase family |Schizosaccharomyces pombe|chr 1|||Manual Length = 238 Score = 24.2 bits (50), Expect = 8.5 Identities = 9/30 (30%), Positives = 16/30 (53%) Frame = -1 Query: 371 CYHSHPLIRSVNVSTEHSATGSVTAVFLSS 282 CY HPL+ ++ + TG + A L++ Sbjct: 77 CYSDHPLVTTLRETYRKPCTGIMQASILTA 106 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 1,325,956 Number of Sequences: 5004 Number of extensions: 22506 Number of successful extensions: 74 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 74 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 74 length of database: 2,362,478 effective HSP length: 66 effective length of database: 2,032,214 effective search space used: 150383836 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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