Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0595
(422 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_1021 + 25364349-25364465,25367237-25367324,25367851-253680... 33 0.072
06_03_0672 + 23359510-23361253,23389969-23390203,23392078-233922... 33 0.13
07_03_1473 + 26756338-26757583,26759067-26759472,26760867-267609... 32 0.17
05_04_0300 - 19969066-19969535,19971216-19972686 31 0.29
02_01_0773 - 5760034-5760386,5760889-5760925,5761069-5761225,576... 31 0.29
03_02_0743 + 10876178-10876699 31 0.51
02_02_0184 - 7581345-7581769,7581880-7582296,7582891-7583661,758... 30 0.88
01_01_0518 - 3810290-3810397,3810469-3810851,3810949-3811069 30 0.88
09_02_0376 + 8140260-8140811,8141390-8141464,8141542-8141598,814... 29 1.2
02_02_0679 - 12875988-12876016,12876186-12876306,12877792-12877974 29 1.2
05_05_0303 - 23958989-23960563,23962628-23962864,23963250-239634... 29 1.5
01_06_1033 + 33955883-33956374 29 2.0
06_03_1449 - 30239342-30239377,30239804-30239881,30241802-30242152 28 2.7
06_03_1431 - 30105385-30105420,30105847-30105924,30107845-30108195 28 2.7
06_03_1419 + 30048230-30048580,30050596-30050673,30051100-30051135 28 2.7
05_01_0360 + 2814139-2814627,2815203-2815334,2815480-2815583,281... 27 4.7
05_05_0019 - 21555727-21555777,21556252-21557213,21558242-21558308 27 6.2
01_06_0877 + 32662978-32663179,32663718-32663951,32664080-326641... 27 6.2
05_05_0316 + 24035163-24035228,24035524-24035583,24035710-240357... 27 8.2
01_05_0638 - 23871424-23871974,23872154-23872325 27 8.2
>12_02_1021 +
25364349-25364465,25367237-25367324,25367851-25368004,
25368196-25368271,25368350-25368475,25369400-25369744
Length = 301
Score = 33.5 bits (73), Expect = 0.072
Identities = 15/34 (44%), Positives = 25/34 (73%)
Frame = +2
Query: 188 SAQDSRKRKKEYVDGLEDRVKQCTAENQTLIRRI 289
SA+ SRKRK+ +++ LE +V Q +EN +L +R+
Sbjct: 127 SARRSRKRKQAHLNDLESQVSQLRSENASLQKRL 160
>06_03_0672 +
23359510-23361253,23389969-23390203,23392078-23392234,
23392535-23392597
Length = 732
Score = 32.7 bits (71), Expect = 0.13
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = +2
Query: 188 SAQDSRKRKKEYVDGLEDRVKQCTAENQTLIRRI 289
SAQ +R+RKK Y+ LE RVK N L R+
Sbjct: 667 SAQQARERKKAYMSELEARVKDLERSNSELEERL 700
>07_03_1473 +
26756338-26757583,26759067-26759472,26760867-26760930,
26760975-26761055,26763350-26763588,26763689-26763947,
26764359-26764538,26764937-26765092,26765174-26765350
Length = 935
Score = 32.3 bits (70), Expect = 0.17
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = +2
Query: 188 SAQDSRKRKKEYVDGLEDRVKQCTAENQTLIRRI 289
SA SR+RKK+YV+ LE +VK A L RI
Sbjct: 124 SAHQSRQRKKQYVEELEGKVKVMQATIADLTARI 157
>05_04_0300 - 19969066-19969535,19971216-19972686
Length = 646
Score = 31.5 bits (68), Expect = 0.29
Identities = 17/34 (50%), Positives = 22/34 (64%)
Frame = +2
Query: 188 SAQDSRKRKKEYVDGLEDRVKQCTAENQTLIRRI 289
SAQ SR+RKK YV+ LE++VK + L RI
Sbjct: 185 SAQLSRQRKKRYVEELEEKVKSMHSVINDLNSRI 218
>02_01_0773 -
5760034-5760386,5760889-5760925,5761069-5761225,
5762584-5762773,5762873-5763154,5763582-5763645
Length = 360
Score = 31.5 bits (68), Expect = 0.29
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +2
Query: 188 SAQDSRKRKKEYVDGLEDRVKQCTAENQTLIRR 286
SAQ +R+RKK Y++ LE +VK +N L R
Sbjct: 186 SAQQARERKKAYLNDLEVKVKDLEKKNSELEER 218
>03_02_0743 + 10876178-10876699
Length = 173
Score = 30.7 bits (66), Expect = 0.51
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2
Query: 188 SAQDSRKRKKEYVDGLEDRVKQCTAENQTL 277
SAQ SR +K++YVDGL +Q EN +
Sbjct: 36 SAQRSRIKKQQYVDGLAVEAEQLRRENDAM 65
>02_02_0184 - 7581345-7581769,7581880-7582296,7582891-7583661,
7583894-7584437,7584794-7584961,7585019-7585101,
7585190-7585631
Length = 949
Score = 29.9 bits (64), Expect = 0.88
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 5/45 (11%)
Frame = +1
Query: 91 GEGGHHATHQLSAHET----RGTGAEEDQTQNQEQ-DLSSGLEET 210
G GG H + ++E G +E+Q Q QEQ D++ G +ET
Sbjct: 904 GSGGEHVPPEEDSYEAAAVLAGDDVDEEQLQRQEQVDMTDGTDET 948
>01_01_0518 - 3810290-3810397,3810469-3810851,3810949-3811069
Length = 203
Score = 29.9 bits (64), Expect = 0.88
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +2
Query: 188 SAQDSRKRKKEYVDGLEDRVKQCTAENQTLIRRI 289
SAQ +R+RKK Y+ LE + K N L +R+
Sbjct: 123 SAQQARERKKAYMTELEAKAKDLELRNAELEQRV 156
>09_02_0376 +
8140260-8140811,8141390-8141464,8141542-8141598,
8142645-8142833
Length = 290
Score = 29.5 bits (63), Expect = 1.2
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +1
Query: 103 HHATHQLSAHETRGTGAEEDQTQNQEQDLSSGLEE 207
H +T+ S ++ G +ED+ + E++ SSG EE
Sbjct: 60 HISTYYSSGDDSDSDGTDEDEEEEDEEESSSGEEE 94
>02_02_0679 - 12875988-12876016,12876186-12876306,12877792-12877974
Length = 110
Score = 29.5 bits (63), Expect = 1.2
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +1
Query: 214 EGICRWTRRQGKTVYRREP 270
+GICRW RR G+T +P
Sbjct: 8 DGICRWLRRHGRTASAYQP 26
>05_05_0303 -
23958989-23960563,23962628-23962864,23963250-23963449,
23964088-23964250,23964348-23964554,23964667-23964798
Length = 837
Score = 29.1 bits (62), Expect = 1.5
Identities = 17/69 (24%), Positives = 32/69 (46%)
Frame = +1
Query: 154 EEDQTQNQEQDLSSGLEETQEGICRWTRRQGKTVYRREPDVN*EDKNTAVTEPVAECSVE 333
+ T +Q ++ E+ G C+W R ++ D+ E N AV P+ + S++
Sbjct: 474 DRGSTDSQSDEMKVDSEDKPAGTCKWGRAFSVRRRKKLSDIKVEPINAAVDSPL-DSSLD 532
Query: 334 TFTERIKGC 360
+ R+ GC
Sbjct: 533 SPFGRV-GC 540
>01_06_1033 + 33955883-33956374
Length = 163
Score = 28.7 bits (61), Expect = 2.0
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +2
Query: 203 RKRKKEYVDGLEDRVKQCTAENQTLIRRIK 292
R++KK + LE+ VK+ NQ L+RR++
Sbjct: 29 REKKKAHAAFLEEEVKKLRTTNQQLLRRLQ 58
>06_03_1449 - 30239342-30239377,30239804-30239881,30241802-30242152
Length = 154
Score = 28.3 bits (60), Expect = 2.7
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +2
Query: 188 SAQDSRKRKKEYVDGLEDRVKQCTAENQTLIRRIK 292
SA SR RK+ YV+ LE V++ +N L ++ K
Sbjct: 108 SALRSRARKRAYVEELEKEVRRLVDDNLNLKKQCK 142
>06_03_1431 - 30105385-30105420,30105847-30105924,30107845-30108195
Length = 154
Score = 28.3 bits (60), Expect = 2.7
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +2
Query: 188 SAQDSRKRKKEYVDGLEDRVKQCTAENQTLIRRIK 292
SA SR RK+ YV+ LE V++ +N L ++ K
Sbjct: 108 SALRSRARKRAYVEELEKEVRRLVDDNLNLKKQCK 142
>06_03_1419 + 30048230-30048580,30050596-30050673,30051100-30051135
Length = 154
Score = 28.3 bits (60), Expect = 2.7
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +2
Query: 188 SAQDSRKRKKEYVDGLEDRVKQCTAENQTLIRRIK 292
SA SR RK+ YV+ LE V++ +N L ++ K
Sbjct: 108 SALRSRARKRAYVEELEKEVRRLVDDNLNLKKQCK 142
>05_01_0360 + 2814139-2814627,2815203-2815334,2815480-2815583,
2816180-2816292,2818409-2818506,2818636-2818815,
2818893-2819114,2819270-2819404,2819489-2819771,
2819858-2819931,2820164-2820384,2820463-2820550,
2820651-2820744,2820827-2821015,2821369-2821400,
2821542-2821621,2821718-2821807,2821911-2821980,
2822240-2822285,2822370-2822428,2822588-2822753,
2822929-2823107,2823186-2823392,2823529-2823633,
2823701-2823703
Length = 1152
Score = 27.5 bits (58), Expect = 4.7
Identities = 23/81 (28%), Positives = 32/81 (39%), Gaps = 7/81 (8%)
Frame = +1
Query: 133 ETRGTGAEEDQTQNQEQDLSSGLEET-QEGICRWTRRQGKTV------YRREPDVN*EDK 291
+T G G +EDQ + + E+ +EG WTRR T Y R N +
Sbjct: 905 DTVGEGDDEDQLEPLTVEEQEEKEQLLEEGFSTWTRRDFNTFIRACEKYGRNDIKNISSE 964
Query: 292 NTAVTEPVAECSVETFTERIK 354
TE + + F ER K
Sbjct: 965 MEGKTEEEVQRYAKVFQERYK 985
>05_05_0019 - 21555727-21555777,21556252-21557213,21558242-21558308
Length = 359
Score = 27.1 bits (57), Expect = 6.2
Identities = 21/69 (30%), Positives = 27/69 (39%)
Frame = -1
Query: 419 TAALADTCPAGQTCSYCYHSHPLIRSVNVSTEHSATGSVTAVFLSS*LTSGSLRYTVLPC 240
TAA+ PA Q+ L VNVST HS T+ S+ L + P
Sbjct: 103 TAAMQSLLPAMQSVHQALLDLGLAGRVNVSTAHSVNILATSYPPSAGAFREDLAQYIQPL 162
Query: 239 LRVHRHIPS 213
L H + S
Sbjct: 163 LNFHAEVGS 171
>01_06_0877 +
32662978-32663179,32663718-32663951,32664080-32664143,
32664250-32664379,32664483-32664624,32664806-32665063,
32665168-32665252,32665609-32665711,32666281-32666406,
32666476-32666589,32666769-32666887,32666993-32667080,
32667154-32667246,32667325-32667414,32667522-32667641,
32667782-32667877
Length = 687
Score = 27.1 bits (57), Expect = 6.2
Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = -3
Query: 405 RHVSGWADLFVLLPLAPFNTFCKRFN*ALSDWFCDCSIFILLINVWFSAVHCFTLSSS-P 229
+ V A FVLLP FN S D S+ +LLI + + C T+S S P
Sbjct: 251 QRVGSVAANFVLLPYYTFNYLVSSNAEGASSQLADNSLLVLLILIHYR--KCITMSESFP 308
Query: 228 ST 223
S+
Sbjct: 309 SS 310
>05_05_0316 +
24035163-24035228,24035524-24035583,24035710-24035787,
24035862-24035913,24036124-24036395,24036508-24036750,
24036849-24036995
Length = 305
Score = 26.6 bits (56), Expect = 8.2
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +2
Query: 188 SAQDSRKRKKEYVDGLEDRVKQCTAENQTLIR 283
+A+ SR RKK YV LED + T Q L R
Sbjct: 33 AARKSRLRKKAYVQQLEDSRMKLTQLEQELQR 64
>01_05_0638 - 23871424-23871974,23872154-23872325
Length = 240
Score = 26.6 bits (56), Expect = 8.2
Identities = 14/47 (29%), Positives = 18/47 (38%), Gaps = 1/47 (2%)
Frame = +1
Query: 142 GTGAEEDQTQNQEQDLSSGLEETQEGICRWTRRQGKTVYRREP-DVN 279
G GAE+ Q + D G + G C R G+ P D N
Sbjct: 22 GRGAEDTQPSEDKADKGKGTQTAAAGTCLGEERAGRDQGEERPGDTN 68
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,162,983
Number of Sequences: 37544
Number of extensions: 158817
Number of successful extensions: 555
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 545
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 555
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 778540620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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