Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0595
(422 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17789| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 6e-08
SB_20196| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.014
SB_20521| Best HMM Match : Y_phosphatase (HMM E-Value=0) 32 0.17
SB_31222| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.2
SB_7872| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.8
SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.4
SB_25359| Best HMM Match : p450 (HMM E-Value=0) 27 6.4
SB_22638| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.4
SB_30132| Best HMM Match : 7tm_1 (HMM E-Value=0) 27 8.5
SB_24606| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.5
>SB_17789| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 216
Score = 53.6 bits (123), Expect = 6e-08
Identities = 32/87 (36%), Positives = 43/87 (49%)
Frame = +2
Query: 29 VSDGRNGYPRLVLTAEERRLLAKEGITLPTSYPLTKHXXXXXXXXXXXXXXXXSAQDSRK 208
V++ + Y + LT ER EGI LP LTK SAQ+SR+
Sbjct: 122 VNEQQGRYKNVELTPLERDTFMAEGIPLPNGGHLTKTQERALKRIRRKIKNKLSAQESRR 181
Query: 209 RKKEYVDGLEDRVKQCTAENQTLIRRI 289
+KKEYV+ LE R++ EN TL R+
Sbjct: 182 KKKEYVETLEKRLESFILENNTLRDRV 208
>SB_20196| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 297
Score = 35.9 bits (79), Expect = 0.014
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +2
Query: 188 SAQDSRKRKKEYVDGLEDRVKQCTAENQTLIRRIK 292
+A++ R++KKEYV LE+RV +N+TLI +K
Sbjct: 252 AAKECRRKKKEYVKCLENRVAVLENQNKTLIEELK 286
>SB_20521| Best HMM Match : Y_phosphatase (HMM E-Value=0)
Length = 834
Score = 32.3 bits (70), Expect = 0.17
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +2
Query: 65 LTAEERRLLAKEGITLPTSYPLTK 136
LT EERR L EG+ +P+ PLTK
Sbjct: 628 LTDEERRTLISEGLPVPSGLPLTK 651
>SB_31222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 367
Score = 29.5 bits (63), Expect = 1.2
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = +2
Query: 188 SAQDSRKRKKEYVDGLEDRVKQCTAENQTL 277
+A+++R +KK+Y++ LE V+ ENQ L
Sbjct: 189 AARENRAKKKKYMEDLEKTVQDLKKENQEL 218
>SB_7872| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 135
Score = 27.5 bits (58), Expect = 4.8
Identities = 23/78 (29%), Positives = 36/78 (46%)
Frame = +1
Query: 109 ATHQLSAHETRGTGAEEDQTQNQEQDLSSGLEETQEGICRWTRRQGKTVYRREPDVN*ED 288
AT H+ R A Q + + SG++E E + R TRR+ K EP+
Sbjct: 19 ATESEWQHKLRDRDALSKLRQKEYAE-PSGIDEGDEVLLRQTRRENKLSPVFEPEAYKVL 77
Query: 289 KNTAVTEPVAECSVETFT 342
+ T T+ + E +V+T T
Sbjct: 78 QKTGKTDTL-EITVQTHT 94
>SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6116
Score = 27.1 bits (57), Expect = 6.4
Identities = 17/47 (36%), Positives = 20/47 (42%)
Frame = -1
Query: 371 CYHSHPLIRSVNVSTEHSATGSVTAVFLSS*LTSGSLRYTVLPCLRV 231
CYH I + TE T TA F+S+ T G L P L V
Sbjct: 5763 CYHDSSQIFKIKTVTETKPTVPPTAAFMST--TEGYLTVGAAPLLLV 5807
>SB_25359| Best HMM Match : p450 (HMM E-Value=0)
Length = 1084
Score = 27.1 bits (57), Expect = 6.4
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -1
Query: 401 TCPAGQTCSYCYHSHPLIRSVNVST 327
TCP G SYCY S S + ST
Sbjct: 566 TCPTGNKISYCYGSKTYSTSSSRST 590
>SB_22638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 431
Score = 27.1 bits (57), Expect = 6.4
Identities = 11/41 (26%), Positives = 20/41 (48%)
Frame = +1
Query: 115 HQLSAHETRGTGAEEDQTQNQEQDLSSGLEETQEGICRWTR 237
+ LS E + T + E ++ S +E +GI +WT+
Sbjct: 258 YDLSVEEAKNTKSSEQGNVKARRETLSMIENAGDGIIQWTK 298
>SB_30132| Best HMM Match : 7tm_1 (HMM E-Value=0)
Length = 355
Score = 26.6 bits (56), Expect = 8.5
Identities = 10/36 (27%), Positives = 20/36 (55%)
Frame = -3
Query: 312 WFCDCSIFILLINVWFSAVHCFTLSSSPSTYSFLRF 205
W +I I+++ +W ++ C T + S + FL+F
Sbjct: 148 WMTPRTIKIMVVYIWLQSLICATSTFLFSKFEFLKF 183
>SB_24606| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 315
Score = 26.6 bits (56), Expect = 8.5
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -3
Query: 309 FCDCSIFILLINVWFSAVHCFTLSSSPSTYSFLRFLES 196
F CS+F+LLI V + V +S PS + R L S
Sbjct: 8 FPSCSVFVLLIRVHYHLV--IPISDKPSMKTIYRELPS 43
Score = 26.6 bits (56), Expect = 8.5
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -3
Query: 309 FCDCSIFILLINVWFSAVHCFTLSSSPSTYSFLRFLES 196
F CS+F+LLI V + V +S PS + R L S
Sbjct: 79 FPSCSVFVLLIRVHYHLV--IPISDKPSMKTIYRELPS 114
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,492,213
Number of Sequences: 59808
Number of extensions: 192618
Number of successful extensions: 768
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 715
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 763
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 801830705
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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