Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0591
         (585 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.               25   0.72 
AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex det...    23   2.2  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    23   2.2  
DQ325090-1|ABD14104.1|  178|Apis mellifera complementary sex det...    22   3.9  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   5.1  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    21   6.7  
AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex det...    21   8.9  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        21   8.9  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        21   8.9  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        21   8.9  

>DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.
          Length = 152

 Score = 24.6 bits (51), Expect = 0.72
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = +2

Query: 116 TVLLSIFPLCVLLKIKNRLQIFTLCIPIYNL 208
           T+++ +F LC++  +  R    TLC+   NL
Sbjct: 3   TIVILLFTLCIVSYMMVRCDDITLCLKQENL 33


>AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex
           determiner protein.
          Length = 419

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -3

Query: 133 N*KKNSYCNFNVPLFYLKRILN 68
           N   N+Y N+N  L+Y   I+N
Sbjct: 332 NYNNNNYNNYNKKLYYKNYIIN 353


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = -3

Query: 115 YCNFNVPLFYLKRILNFSLALQRALNSSFDINLITSLF 2
           Y    V LF+  RI N +++  +A+N  F     + +F
Sbjct: 257 YIPMLVMLFFYWRIYNAAVSTTKAINQGFRTTKSSKMF 294


>DQ325090-1|ABD14104.1|  178|Apis mellifera complementary sex
           determiner protein.
          Length = 178

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -3

Query: 121 NSYCNFNVPLFYLKRILN 68
           N+Y N+N  L+Y   I+N
Sbjct: 95  NNYNNYNKKLYYKNYIIN 112


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -2

Query: 377  KIFSTRMSLFQVIFAFILVFMTRVIV 300
            KIF   ++L   + A ILV +  VIV
Sbjct: 1579 KIFMANLNLVVPVVAAILVIIVAVIV 1604


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +2

Query: 101 IKIAITVLLSIFPLCVL 151
           + I  +VL  IFP C++
Sbjct: 201 LPIGASVLFEIFPFCIV 217


>AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex
           determiner protein.
          Length = 413

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -3

Query: 124 KNSYCNFNVPLFYLKRILN 68
           K +Y N+N  L+Y   I+N
Sbjct: 330 KYNYNNYNKKLYYKNYIIN 348


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = +2

Query: 107 IAITVLLSIFPLCVLLKIKNRLQIFTLCIP-IYN 205
           +A+ VL     L V+    +  +IFT+C+P IY+
Sbjct: 10  LAVNVLFVNSFLFVIAAQDSSGRIFTICVPEIYS 43


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = +2

Query: 107 IAITVLLSIFPLCVLLKIKNRLQIFTLCIP-IYN 205
           +A+ VL     L V+    +  +IFT+C+P IY+
Sbjct: 10  LAVNVLFVNSFLFVIAAQDSSGRIFTICVPEIYS 43


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = +2

Query: 107 IAITVLLSIFPLCVLLKIKNRLQIFTLCIP-IYN 205
           +A+ VL     L V+    +  +IFT+C+P IY+
Sbjct: 10  LAVNVLFVNSFLFVIAAQDSSGRIFTICVPEIYS 43


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,094
Number of Sequences: 438
Number of extensions: 2305
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16993167
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)