Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0589
         (475 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    23   1.1  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   1.4  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   5.8  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   5.8  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    21   5.8  

>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -1

Query: 181 IVLAYNCSGFKYSSEKLA 128
           I+LAY C+G    +EK+A
Sbjct: 298 ILLAYGCAGATSEAEKIA 315


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -1

Query: 349 CTSHPCRQNDVCGVS 305
           C S+PC+   VC +S
Sbjct: 380 CDSNPCQNGGVCRIS 394


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +1

Query: 331 YKGGMYRTIT 360
           YKGG YR +T
Sbjct: 519 YKGGKYRKVT 528


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = +1

Query: 247 KNKHGPLILIKKPKNGHVPSTHRTHHSAYK 336
           K++  P   +KK  N   PS   T H+  K
Sbjct: 236 KSESSPFESLKKSLNFRTPSCLETFHTLEK 265


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 6/17 (35%), Positives = 10/17 (58%)
 Frame = -2

Query: 357 YRPVHPTLVGRMMCAVC 307
           Y P HP    + +C++C
Sbjct: 73  YPPNHPLSGSKHLCSIC 89


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,679
Number of Sequences: 336
Number of extensions: 2672
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11036865
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)