BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= an--0589 (475 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces... 27 1.1 SPAC11H11.04 |mam2||pheromone p-factor receptor|Schizosaccharomy... 27 1.9 SPCC11E10.08 |rik1||silencing protein Rik1|Schizosaccharomyces p... 26 3.4 SPAC3H1.10 |||phytochelatin synthetase |Schizosaccharomyces pomb... 26 3.4 SPBC2D10.13 |est1||telomerase regulator Est1|Schizosaccharomyces... 25 5.9 SPAC6F12.12 |par2|pbp2|protein phosphatase regulatory subunit Pa... 25 5.9 >SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces pombe|chr 2|||Manual Length = 637 Score = 27.5 bits (58), Expect = 1.1 Identities = 12/28 (42%), Positives = 15/28 (53%) Frame = +3 Query: 51 TNRRTVLTGVIHQGNNGVMPQGTVPTAS 134 TN++ +TG G NG P T PT S Sbjct: 522 TNQKVSITGAAADGPNGSAPVDTTPTNS 549 >SPAC11H11.04 |mam2||pheromone p-factor receptor|Schizosaccharomyces pombe|chr 1|||Manual Length = 348 Score = 26.6 bits (56), Expect = 1.9 Identities = 10/24 (41%), Positives = 18/24 (75%) Frame = -3 Query: 413 RDRVHAGVTIKACLAVGIVIVLYI 342 RDR+ G+T+ A LA+G++ +L + Sbjct: 43 RDRLLTGMTLSAQLALGVLTILMV 66 >SPCC11E10.08 |rik1||silencing protein Rik1|Schizosaccharomyces pombe|chr 3|||Manual Length = 1040 Score = 25.8 bits (54), Expect = 3.4 Identities = 9/20 (45%), Positives = 12/20 (60%) Frame = -3 Query: 296 CPFFGFFMRINGPCLFFPLW 237 C + G F+ INGPC + W Sbjct: 239 CMYRGNFVTINGPCTTYMHW 258 >SPAC3H1.10 |||phytochelatin synthetase |Schizosaccharomyces pombe|chr 1|||Manual Length = 414 Score = 25.8 bits (54), Expect = 3.4 Identities = 11/43 (25%), Positives = 22/43 (51%) Frame = -2 Query: 264 WSVFVLPFVDRSTTDPVLERTLSSNREALCSRITVPVSNIPRK 136 W++F LP + ++ VLE S +E S I ++ + ++ Sbjct: 349 WAIFSLPMIQKALPKGVLEEIQSLLKEVEISEINTQLTALKKQ 391 >SPBC2D10.13 |est1||telomerase regulator Est1|Schizosaccharomyces pombe|chr 2|||Manual Length = 490 Score = 25.0 bits (52), Expect = 5.9 Identities = 10/30 (33%), Positives = 16/30 (53%) Frame = -2 Query: 429 THRKPERSCPCRCYYKSVPGRRDSYRPVHP 340 T +P+ C C+YK + R +R +HP Sbjct: 59 TFERPDIIWSC-CHYKIIQHFRSRFREIHP 87 >SPAC6F12.12 |par2|pbp2|protein phosphatase regulatory subunit Par2|Schizosaccharomyces pombe|chr 1|||Manual Length = 627 Score = 25.0 bits (52), Expect = 5.9 Identities = 13/29 (44%), Positives = 16/29 (55%) Frame = +3 Query: 237 PQREEQTRTIDSHKETEKRACSFDTPHTS 323 P+RE ++ S K T R SFD HTS Sbjct: 189 PRREHSSQFQVSEKRTLVRLPSFDDVHTS 217 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,027,726 Number of Sequences: 5004 Number of extensions: 43599 Number of successful extensions: 113 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 112 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 113 length of database: 2,362,478 effective HSP length: 67 effective length of database: 2,027,210 effective search space used: 182448900 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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