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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0589
         (475 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_35244| Best HMM Match : Ldl_recept_b (HMM E-Value=3.2e-11)          30   1.1  
SB_47786| Best HMM Match : Ank (HMM E-Value=4.4e-30)                   28   3.4  
SB_1649| Best HMM Match : ANF_receptor (HMM E-Value=1.2e-05)           28   3.4  
SB_40294| Best HMM Match : RhoGEF (HMM E-Value=7.5e-08)                27   6.0  
SB_32977| Best HMM Match : Gp-FAR-1 (HMM E-Value=2.5)                  27   6.0  
SB_58656| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   6.0  
SB_26126| Best HMM Match : Ldl_recept_b (HMM E-Value=3e-24)            27   6.0  
SB_9702| Best HMM Match : No HMM Matches (HMM E-Value=.)               27   6.0  
SB_8684| Best HMM Match : No HMM Matches (HMM E-Value=.)               27   6.0  
SB_29638| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   7.9  
SB_13057| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   7.9  

>SB_35244| Best HMM Match : Ldl_recept_b (HMM E-Value=3.2e-11)
          Length = 534

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
 Frame = +3

Query: 306 DTPH-TSFCLQGWDVQD--DNYPYGQARFYSNTCMDTISPAFYGFALNN 443
           D+PH     L G + +   +NYPY  + ++ + C+D      Y F ++N
Sbjct: 177 DSPHIVRSALSGDESKTIFENYPYSYSHYHIDICLDYAQKRIYTFEIDN 225


>SB_47786| Best HMM Match : Ank (HMM E-Value=4.4e-30)
          Length = 796

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 17/71 (23%), Positives = 29/71 (40%)
 Frame = +3

Query: 207 FQELDQLCSDPQREEQTRTIDSHKETEKRACSFDTPHTSFCLQGWDVQDDNYPYGQARFY 386
           F+ L+Q  S+P R+ +  T D  K   KR C+ +  + S        Q +          
Sbjct: 493 FKALEQQQSNPPRKHKFHTQDPEKTPAKRVCTSNEKNNSAAASLVSTQGNKESLSSTEST 552

Query: 387 SNTCMDTISPA 419
           S   ++T+  A
Sbjct: 553 SGDSLETLVSA 563


>SB_1649| Best HMM Match : ANF_receptor (HMM E-Value=1.2e-05)
          Length = 481

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
 Frame = +1

Query: 217 WISCAPIHK-GKNKHGPLILIKKPKNGHVPSTHRTHHSA--YKGG-MYRTITIPTARHAF 384
           W+S +P+H   K+K+   +L    K   V +T + H S+   +GG M   + + ++R  F
Sbjct: 318 WVSYSPVHNVEKSKNAITVLDTMKKIKVVGTTGQIHFSSEGERGGEMLDVMNLRSSR--F 375

Query: 385 IVTPAWTRSLRLSMGSL 435
           I    W  S RL  GSL
Sbjct: 376 IKVGTW-NSTRLVSGSL 391


>SB_40294| Best HMM Match : RhoGEF (HMM E-Value=7.5e-08)
          Length = 389

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = -2

Query: 273 ENQWSVFVLPFVDRSTTDPVLERTLSSNREALCSRITVP 157
           +N+W   ++    RST D +L+  L    +A+  RI  P
Sbjct: 330 KNEWMAMLMTLYMRSTMDRLLDHILMEEEKAIPLRIPSP 368


>SB_32977| Best HMM Match : Gp-FAR-1 (HMM E-Value=2.5)
          Length = 402

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
 Frame = +3

Query: 126 TASFSEEYLKPEQLYASTMLHGSNSEFFQELDQLCSDPQRE--EQTRTIDSHKETEKRAC 299
           T S  E+ L+  ++Y   M  G N+E++Q++  +C D  ++  +QT   +  +E+   A 
Sbjct: 85  TQSDLEDLLEDIKVYLE-MDQGKNAEYWQDITIICKDEIKKLRKQTENYNDRRESIHTAV 143

Query: 300 SFD 308
             D
Sbjct: 144 HSD 146


>SB_58656| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 77

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -2

Query: 447 SHY*ERTHRKPERSCPCRCYYKSVPGRRDS 358
           +HY   TH +PE +C C   Y S PG+  S
Sbjct: 12  THYDTETHTQPEVTC-CHQTYVSDPGKLHS 40


>SB_26126| Best HMM Match : Ldl_recept_b (HMM E-Value=3e-24)
          Length = 652

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 3/26 (11%)
 Frame = -1

Query: 181 IVLAYNCS---GFKYSSEKLAVGTVP 113
           + L YNCS   G+K    +L VGT+P
Sbjct: 266 LTLGYNCSCFSGYKLQGARLCVGTLP 291


>SB_9702| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 708

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
 Frame = +3

Query: 84  HQGNNGVMPQGTVPTASFSEEYLKPEQLYASTMLHGSNS-EFFQELDQLCSDPQREEQ 254
           H   +G++          S E +   QL A   +H   + +FF+ L + CSDP   E+
Sbjct: 163 HDDFSGILLPAVQKALLRSPEVVLEWQLRAKEEIHRQQAIQFFKNLSKQCSDPAAVEE 220


>SB_8684| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 398

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
 Frame = +3

Query: 168 YASTMLHGSNSEFFQELDQLCSDPQREEQTR---TIDSHKETEKRA 296
           +  TM   S SE  QEL +L  DP+ +E T    +ID+ K  +  A
Sbjct: 54  HVKTMAEESMSEASQELKELKGDPESQEPTNCAISIDTGKVLDVEA 99


>SB_29638| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 163

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 12/38 (31%), Positives = 17/38 (44%)
 Frame = +1

Query: 295 HVPSTHRTHHSAYKGGMYRTITIPTARHAFIVTPAWTR 408
           H PS+HRT H A +     TI   +       +  WT+
Sbjct: 40  HPPSSHRTVHDAPRASESATIANESTTKTHAESSGWTK 77


>SB_13057| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 892

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = -2

Query: 255 FVLPFVDRSTTDPVLERTLSSNREALCSRITVPV-SNIPRKSW 130
           F+ P  DR T+D +LER L  N +    R+   V    P++ W
Sbjct: 824 FLKPTYDRLTSDALLERCLPGNTQNPNERLNSLVWLRCPKQRW 866


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,536,287
Number of Sequences: 59808
Number of extensions: 349640
Number of successful extensions: 1140
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 956
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1140
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 994359969
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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